RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 SUPT20HQ8NEM7 779 aa12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 KCNG4Q8TDN1 519 aa12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 MRPS27Q92552 414 aaKnown RBP12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 MKNK2Q9HBH9 465 aa12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 TFAP4Q01664 338 aa12.49□□□□□ -0.41
PDXDC1-214ENST00000566633 NOLC1Q14978 699 aaKnown RBP eCLIP12.49□□□□□ -0.41
PDXDC1-214ENST00000566633 IQCB1Q15051 598 aa12.49□□□□□ -0.41
PDXDC1-214ENST00000566633 STK38Q15208 465 aa12.49□□□□□ -0.41
PDXDC1-214ENST00000566633 NTRK3Q16288 839 aa12.49□□□□□ -0.41
PDXDC1-214ENST00000566633 PLA2G4DQ86XP0 818 aa12.49□□□□□ -0.41
PDXDC1-214ENST00000566633 SPC24Q8NBT2 197 aa12.49□□□□□ -0.41
PDXDC1-214ENST00000566633 AIFM3Q96NN9 605 aa12.49□□□□□ -0.41
PDXDC1-214ENST00000566633 ZSCAN10Q96SZ4 725 aaPredicted RBP12.49□□□□□ -0.41
PDXDC1-214ENST00000566633 FAM217BQ9NTX9 383 aaPredicted RBP12.49□□□□□ -0.41
PDXDC1-214ENST00000566633 GOLGA6L6A8MZA4 724 aa12.49□□□□□ -0.41
PDXDC1-214ENST00000566633 PSMD14O00487 310 aa12.49□□□□□ -0.41
PDXDC1-214ENST00000566633 SPTLC2O15270 562 aa12.49□□□□□ -0.41
PDXDC1-214ENST00000566633 PDE4BQ07343 736 aa12.49□□□□□ -0.41
PDXDC1-214ENST00000566633 SART3Q15020 963 aaKnown RBP12.49□□□□□ -0.41
PDXDC1-214ENST00000566633 SYNE3Q6ZMZ3 975 aa12.49□□□□□ -0.41
PDXDC1-214ENST00000566633 PKNOX2Q96KN3 472 aa12.49□□□□□ -0.41
PDXDC1-214ENST00000566633 ALG1Q9BT22 464 aa12.49□□□□□ -0.41
PDXDC1-214ENST00000566633 KCNF1Q9H3M0 494 aa12.49□□□□□ -0.41
PDXDC1-214ENST00000566633 MTMR7Q9Y216 660 aa12.49□□□□□ -0.41
PDXDC1-214ENST00000566633 SUGT1Q9Y2Z0 365 aa12.49□□□□□ -0.41
PDXDC1-214ENST00000566633 MYH2Q9UKX2 1941 aa12.49□□□□□ -0.41
PDXDC1-214ENST00000566633 GOLGA8AA7E2F4 631 aa12.48□□□□□ -0.41
PDXDC1-214ENST00000566633 FGRP09769 529 aa12.48□□□□□ -0.41
PDXDC1-214ENST00000566633 SEC23AQ15436 765 aa12.48□□□□□ -0.41
PDXDC1-214ENST00000566633 SF3A1Q15459 793 aaKnown RBP12.48□□□□□ -0.41
PDXDC1-214ENST00000566633 STX1AQ16623 288 aa12.48□□□□□ -0.41
PDXDC1-214ENST00000566633 CPLX2Q6PUV4 134 aaKnown RBP12.48□□□□□ -0.41
PDXDC1-214ENST00000566633 PSMD1Q99460 953 aa12.48□□□□□ -0.41
PDXDC1-214ENST00000566633 SCN9AQ15858 1988 aa12.48□□□□□ -0.41
PDXDC1-214ENST00000566633 CCDC88AQ3V6T2 1871 aa12.48□□□□□ -0.41
PDXDC1-214ENST00000566633 A0A1B0GVL5 298 aa12.48□□□□□ -0.41
PDXDC1-214ENST00000566633 SLC3A2P08195 630 aaKnown RBP12.48□□□□□ -0.41
PDXDC1-214ENST00000566633 PLCG2P16885 1265 aa12.48□□□□□ -0.41
PDXDC1-214ENST00000566633 ZNF75DP51815 510 aa12.48□□□□□ -0.41
PDXDC1-214ENST00000566633 NDUFA8P51970 172 aa12.48□□□□□ -0.41
PDXDC1-214ENST00000566633 ANO1Q5XXA6 986 aa12.48□□□□□ -0.41
PDXDC1-214ENST00000566633 TMED8Q6PL24 325 aaPredicted RBP12.48□□□□□ -0.41
PDXDC1-214ENST00000566633 C11orf57Q6ZUT1 292 aaPredicted RBP12.48□□□□□ -0.41
PDXDC1-214ENST00000566633 IQCA1Q86XH1 822 aa12.48□□□□□ -0.41
PDXDC1-214ENST00000566633 SPTLC3Q9NUV7 552 aa12.48□□□□□ -0.41
PDXDC1-214ENST00000566633 COL4A5P29400 1685 aa12.48□□□□□ -0.41
PDXDC1-214ENST00000566633 IFIT1BQ5T764 474 aaKnown RBP12.47□□□□□ -0.41
PDXDC1-214ENST00000566633 KRT40Q6A162 431 aa12.47□□□□□ -0.41
PDXDC1-214ENST00000566633 HHIPL2Q6UWX4 724 aa12.47□□□□□ -0.41
PDXDC1-214ENST00000566633 AMOTL1Q8IY63 956 aa12.47□□□□□ -0.41
PDXDC1-214ENST00000566633 PRMT6Q96LA8 375 aaPredicted RBP12.47□□□□□ -0.41
PDXDC1-214ENST00000566633 TRIM5Q9C035 493 aa12.47□□□□□ -0.41
PDXDC1-214ENST00000566633 TDRD3Q9H7E2 651 aaKnown RBP12.47□□□□□ -0.41
PDXDC1-214ENST00000566633 IL17RBQ9NRM6 502 aa12.47□□□□□ -0.41
PDXDC1-214ENST00000566633 SCAF8Q9UPN6 1271 aaKnown RBP12.47□□□□□ -0.41
PDXDC1-214ENST00000566633 NFKBIEO00221 500 aa12.47□□□□□ -0.41
PDXDC1-214ENST00000566633 IARSP41252 1262 aaKnown RBP12.47□□□□□ -0.41
PDXDC1-214ENST00000566633 CDK8P49336 464 aa12.47□□□□□ -0.41
PDXDC1-214ENST00000566633 RASSF7Q02833 373 aa12.47□□□□□ -0.41
PDXDC1-214ENST00000566633 AXDND1Q5T1B0 1012 aaPredicted RBP12.47□□□□□ -0.41
PDXDC1-214ENST00000566633 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.47□□□□□ -0.41
PDXDC1-214ENST00000566633 ZNF654Q8IZM8 581 aa12.47□□□□□ -0.41
PDXDC1-214ENST00000566633 ZNF444Q8N0Y2 327 aaPredicted RBP12.47□□□□□ -0.41
PDXDC1-214ENST00000566633 C17orf53Q8N3J3 647 aaPredicted RBP12.47□□□□□ -0.41
PDXDC1-214ENST00000566633 KIAA1524Q8TCG1 905 aa12.47□□□□□ -0.41
PDXDC1-214ENST00000566633 hCG_1642624A0A1W2PR95 340 aa12.46□□□□□ -0.41
PDXDC1-214ENST00000566633 FAM196BA6NMK8 535 aa12.46□□□□□ -0.41
PDXDC1-214ENST00000566633 SLC39A14Q15043 492 aa12.46□□□□□ -0.41
PDXDC1-214ENST00000566633 SDF4Q9BRK5 362 aa12.46□□□□□ -0.41
PDXDC1-214ENST00000566633 TAOK3Q9H2K8 898 aa12.46□□□□□ -0.41
PDXDC1-214ENST00000566633 ANO10Q9NW15 660 aa12.46□□□□□ -0.41
PDXDC1-214ENST00000566633 SHTN1A0MZ66 631 aa12.46□□□□□ -0.42
PDXDC1-214ENST00000566633 ORC4O43929 436 aa12.46□□□□□ -0.42
PDXDC1-214ENST00000566633 TSPY3P0CV98 308 aa12.46□□□□□ -0.42
PDXDC1-214ENST00000566633 TSPY8P0CW00 308 aa12.46□□□□□ -0.42
PDXDC1-214ENST00000566633 CFAP100Q494V2 611 aa12.46□□□□□ -0.42
PDXDC1-214ENST00000566633 TIAM2Q8IVF5 1701 aa12.46□□□□□ -0.42
PDXDC1-214ENST00000566633 NIM1KQ8IY84 436 aa12.46□□□□□ -0.42
PDXDC1-214ENST00000566633 ZDHHC15Q96MV8 337 aa12.46□□□□□ -0.42
PDXDC1-214ENST00000566633 CLRN2A0PK11 232 aa12.45□□□□□ -0.42
PDXDC1-214ENST00000566633 IGSF3O75054 1194 aa12.45□□□□□ -0.42
PDXDC1-214ENST00000566633 RASA1P20936 1047 aa12.45□□□□□ -0.42
PDXDC1-214ENST00000566633 PTGS1P23219 599 aa12.45□□□□□ -0.42
PDXDC1-214ENST00000566633 CMA1P23946 247 aa12.45□□□□□ -0.42
PDXDC1-214ENST00000566633 U2AF2P26368 475 aaKnown RBP eCLIP12.45□□□□□ -0.422e-6■■□□□ 14.2
PDXDC1-214ENST00000566633 GUCY1A2P33402 732 aa12.45□□□□□ -0.42
PDXDC1-214ENST00000566633 CXCL9Q07325 125 aa12.45□□□□□ -0.42
PDXDC1-214ENST00000566633 RSBN1LQ6PCB5 846 aaPredicted RBP12.45□□□□□ -0.42
PDXDC1-214ENST00000566633 SARM1Q6SZW1 724 aa12.45□□□□□ -0.42
PDXDC1-214ENST00000566633 MTA3Q9BTC8 594 aa12.45□□□□□ -0.42
PDXDC1-214ENST00000566633 SLC26A6Q9BXS9 759 aa12.45□□□□□ -0.42
PDXDC1-214ENST00000566633 PYCARDQ9ULZ3 195 aa12.45□□□□□ -0.42
PDXDC1-214ENST00000566633 STX8Q9UNK0 236 aa12.45□□□□□ -0.42
PDXDC1-214ENST00000566633 STK36Q9NRP7 1315 aa12.45□□□□□ -0.42
PDXDC1-214ENST00000566633 ADAMTSL1Q8N6G6 1762 aa12.45□□□□□ -0.42
PDXDC1-214ENST00000566633 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.45□□□□□ -0.42
PDXDC1-214ENST00000566633 GOLGA6L19H0YKK7 550 aa12.45□□□□□ -0.42
PDXDC1-214ENST00000566633 PRELPP51888 382 aa12.45□□□□□ -0.42
PDXDC1-214ENST00000566633 RCSD1Q6JBY9 416 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms