RNA–Protein interactions for RNA: ENST00000565602.5

EDC3-208, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-208ENST00000565602 GOLGA6L3A6NEY3 463 aa21.54■■□□□ 1.04
EDC3-208ENST00000565602 FAM196BA6NMK8 535 aa21.54■■□□□ 1.04
EDC3-208ENST00000565602 KDM4AO75164 1064 aa21.54■■□□□ 1.04
EDC3-208ENST00000565602 SLC3A2P08195 630 aaKnown RBP21.54■■□□□ 1.04
EDC3-208ENST00000565602 CSPP1Q1MSJ5 1256 aa21.54■■□□□ 1.04
EDC3-208ENST00000565602 L1TD1Q5T7N2 865 aaKnown RBP21.54■■□□□ 1.04
EDC3-208ENST00000565602 ISY1Q9ULR0 285 aaKnown RBP21.54■■□□□ 1.04
EDC3-208ENST00000565602 H3BQV1 296 aa21.54■■□□□ 1.04
EDC3-208ENST00000565602 SHMT1P34896 483 aa21.54■■□□□ 1.04
EDC3-208ENST00000565602 DNM1Q05193 864 aaKnown RBP21.54■■□□□ 1.04
EDC3-208ENST00000565602 PDE4BQ07343 736 aa21.54■■□□□ 1.04
EDC3-208ENST00000565602 IFFO2Q5TF58 517 aa21.54■■□□□ 1.04
EDC3-208ENST00000565602 DLK2Q6UY11 383 aa21.54■■□□□ 1.04
EDC3-208ENST00000565602 FOXP4Q8IVH2 680 aaPredicted RBP21.54■■□□□ 1.04
EDC3-208ENST00000565602 DCPSQ96C86 337 aaKnown RBP21.54■■□□□ 1.04
EDC3-208ENST00000565602 PPP2R3BQ9Y5P8 575 aa21.54■■□□□ 1.04
EDC3-208ENST00000565602 ATAD5Q96QE3 1844 aa21.53■■□□□ 1.04
EDC3-208ENST00000565602 ADM5C9JUS6 153 aa21.53■■□□□ 1.04
EDC3-208ENST00000565602 RASA1P20936 1047 aa21.53■■□□□ 1.04
EDC3-208ENST00000565602 MAP3K10Q02779 954 aa21.53■■□□□ 1.04
EDC3-208ENST00000565602 TMEM67Q5HYA8 995 aa21.53■■□□□ 1.04
EDC3-208ENST00000565602 PRAMEF18Q5VWM3 479 aa21.53■■□□□ 1.04
EDC3-208ENST00000565602 FERMT3Q86UX7 667 aa21.53■■□□□ 1.04
EDC3-208ENST00000565602 IGDCC4Q8TDY8 1250 aa21.53■■□□□ 1.04
EDC3-208ENST00000565602 LY9Q9HBG7 655 aa21.53■■□□□ 1.04
EDC3-208ENST00000565602 ZSWIM5Q9P217 1185 aa21.53■■□□□ 1.04
EDC3-208ENST00000565602 PAPPA2Q9BXP8 1791 aa21.53■■□□□ 1.04
EDC3-208ENST00000565602 FIBPO43427 364 aa21.52■■□□□ 1.04
EDC3-208ENST00000565602 RRP12Q5JTH9 1297 aaKnown RBP21.52■■□□□ 1.04
EDC3-208ENST00000565602 NBPF12Q5TAG4 269 aaPredicted RBP21.52■■□□□ 1.04
EDC3-208ENST00000565602 SGMS1Q86VZ5 419 aa21.52■■□□□ 1.04
EDC3-208ENST00000565602 MTA3Q9BTC8 594 aa21.52■■□□□ 1.04
EDC3-208ENST00000565602 TOMM22Q9NS69 142 aa21.52■■□□□ 1.04
EDC3-208ENST00000565602 SWAP70Q9UH65 585 aa21.52■■□□□ 1.04
EDC3-208ENST00000565602 LIFRP42702 1097 aa21.52■■□□□ 1.03
EDC3-208ENST00000565602 APOA5Q6Q788 366 aa21.52■■□□□ 1.03
EDC3-208ENST00000565602 TAOK2Q9UL54 1235 aa21.52■■□□□ 1.03
EDC3-208ENST00000565602 IFIT3O14879 490 aaKnown RBP21.51■■□□□ 1.03
EDC3-208ENST00000565602 TBC1D12O60347 775 aa21.51■■□□□ 1.03
EDC3-208ENST00000565602 KRT85P78386 507 aa21.51■■□□□ 1.03
EDC3-208ENST00000565602 TATDN1Q6P1N9 297 aa21.51■■□□□ 1.03
EDC3-208ENST00000565602 KRT26Q7Z3Y9 468 aa21.51■■□□□ 1.03
EDC3-208ENST00000565602 SULF1Q8IWU6 871 aa21.51■■□□□ 1.03
EDC3-208ENST00000565602 CRACR2BQ8N4Y2 399 aaPredicted RBP21.51■■□□□ 1.03
EDC3-208ENST00000565602 HERC5Q9UII4 1024 aaKnown RBP21.51■■□□□ 1.03
EDC3-208ENST00000565602 CPLX1O14810 134 aa21.5■■□□□ 1.03
EDC3-208ENST00000565602 METAP2P50579 478 aaKnown RBP eCLIP21.5■■□□□ 1.03
EDC3-208ENST00000565602 RESTQ13127 1097 aa21.5■■□□□ 1.03
EDC3-208ENST00000565602 SART3Q15020 963 aaKnown RBP21.5■■□□□ 1.03
EDC3-208ENST00000565602 NFXL1Q6ZNB6 911 aa21.5■■□□□ 1.03
EDC3-208ENST00000565602 RAB11FIP4Q86YS3 637 aa21.5■■□□□ 1.03
EDC3-208ENST00000565602 MKNK2Q9HBH9 465 aa21.5■■□□□ 1.03
EDC3-208ENST00000565602 NID2Q14112 1375 aa21.5■■□□□ 1.03
EDC3-208ENST00000565602 GADD45BO75293 160 aaPredicted RBP21.49■■□□□ 1.03
EDC3-208ENST00000565602 RRP1BQ14684 758 aaKnown RBP21.49■■□□□ 1.03
EDC3-208ENST00000565602 MIGA2Q7L4E1 593 aa21.49■■□□□ 1.03
EDC3-208ENST00000565602 ESR2Q92731 530 aa21.49■■□□□ 1.03
EDC3-208ENST00000565602 GLIS2Q9BZE0 524 aaPredicted RBP21.49■■□□□ 1.03
EDC3-208ENST00000565602 ZSCAN16Q9H4T2 348 aaPredicted RBP21.49■■□□□ 1.03
EDC3-208ENST00000565602 OTOFQ9HC10 1997 aa21.49■■□□□ 1.03
EDC3-208ENST00000565602 RANBP6O60518 1105 aaKnown RBP21.49■■□□□ 1.03
EDC3-208ENST00000565602 ZSCAN23Q3MJ62 389 aa21.49■■□□□ 1.03
EDC3-208ENST00000565602 FAM47AQ5JRC9 791 aa21.49■■□□□ 1.03
EDC3-208ENST00000565602 LDHDQ86WU2 507 aa21.49■■□□□ 1.03
EDC3-208ENST00000565602 ZNF287Q9HBT7 754 aa21.49■■□□□ 1.03
EDC3-208ENST00000565602 SENP2Q9HC62 589 aa21.49■■□□□ 1.03
EDC3-208ENST00000565602 RBM27Q9P2N5 1060 aaKnown RBP21.49■■□□□ 1.03
EDC3-208ENST00000565602 MYH6P13533 1939 aa21.48■■□□□ 1.03
EDC3-208ENST00000565602 ZBTB43O43298 467 aa21.48■■□□□ 1.03
EDC3-208ENST00000565602 FDPSP14324 419 aaKnown RBP21.48■■□□□ 1.03
EDC3-208ENST00000565602 ZNF445P59923 1031 aa21.48■■□□□ 1.03
EDC3-208ENST00000565602 UBE2HP62256 183 aa21.48■■□□□ 1.03
EDC3-208ENST00000565602 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.48■■□□□ 1.032e-6■■■□□ 18.4
EDC3-208ENST00000565602 TMEM63CQ9P1W3 806 aa21.48■■□□□ 1.03
EDC3-208ENST00000565602 CLEC11AQ9Y240 323 aa21.48■■□□□ 1.03
EDC3-208ENST00000565602 PLIN4Q96Q06 1357 aa21.48■■□□□ 1.03
EDC3-208ENST00000565602 ERICH2A1L162 156 aa21.47■■□□□ 1.03
EDC3-208ENST00000565602 CCDC69A6NI79 296 aa21.47■■□□□ 1.03
EDC3-208ENST00000565602 SHROOM1Q2M3G4 852 aaPredicted RBP21.47■■□□□ 1.03
EDC3-208ENST00000565602 MAP1SQ66K74 1059 aaPredicted RBP21.47■■□□□ 1.03
EDC3-208ENST00000565602 MICU3Q86XE3 530 aa21.47■■□□□ 1.03
EDC3-208ENST00000565602 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.47■■□□□ 1.03
EDC3-208ENST00000565602 DOCK1Q14185 1865 aa21.47■■□□□ 1.03
EDC3-208ENST00000565602 CDKL5O76039 1030 aa21.47■■□□□ 1.03
EDC3-208ENST00000565602 AKR1B1P15121 316 aa21.47■■□□□ 1.03
EDC3-208ENST00000565602 NT5C2P49902 561 aa21.47■■□□□ 1.03
EDC3-208ENST00000565602 FOSBP53539 338 aa21.47■■□□□ 1.03
EDC3-208ENST00000565602 TFAP4Q01664 338 aa21.47■■□□□ 1.03
EDC3-208ENST00000565602 WTAPQ15007 396 aa21.47■■□□□ 1.03
EDC3-208ENST00000565602 ZNF444Q8N0Y2 327 aaPredicted RBP21.47■■□□□ 1.03
EDC3-208ENST00000565602 SYAP1Q96A49 352 aaPredicted RBP21.47■■□□□ 1.03
EDC3-208ENST00000565602 ELP1O95163 1332 aa21.46■■□□□ 1.03
EDC3-208ENST00000565602 GOLGA8AA7E2F4 631 aa21.46■■□□□ 1.03
EDC3-208ENST00000565602 PHF20L1A8MW92 1017 aa21.46■■□□□ 1.03
EDC3-208ENST00000565602 JAG1P78504 1218 aa21.46■■□□□ 1.03
EDC3-208ENST00000565602 FAM173BQ6P4H8 233 aa21.46■■□□□ 1.03
EDC3-208ENST00000565602 CPLX2Q6PUV4 134 aaKnown RBP21.46■■□□□ 1.03
EDC3-208ENST00000565602 CDCA5Q96FF9 252 aa21.46■■□□□ 1.03
EDC3-208ENST00000565602 ZKSCAN3Q9BRR0 538 aa21.46■■□□□ 1.03
EDC3-208ENST00000565602 TRIM34Q9BYJ4 488 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms