RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 ENTPD3O75355 529 aa19.25■□□□□ 0.67
THUMPD1-203ENST00000565248 FXR1P51114 621 aaKnown RBP eCLIP19.25■□□□□ 0.67
THUMPD1-203ENST00000565248 Q6ZUG5 572 aa19.25■□□□□ 0.67
THUMPD1-203ENST00000565248 NOL8Q76FK4 1167 aaKnown RBP19.25■□□□□ 0.67
THUMPD1-203ENST00000565248 TMEM87BQ96K49 555 aa19.25■□□□□ 0.67
THUMPD1-203ENST00000565248 PRMT6Q96LA8 375 aaPredicted RBP19.25■□□□□ 0.67
THUMPD1-203ENST00000565248 MTA3Q9BTC8 594 aa19.25■□□□□ 0.67
THUMPD1-203ENST00000565248 OSBPL5Q9H0X9 879 aaPredicted RBP19.25■□□□□ 0.67
THUMPD1-203ENST00000565248 DHX36Q9H2U1 1008 aaKnown RBP19.25■□□□□ 0.67
THUMPD1-203ENST00000565248 TDRD3Q9H7E2 651 aaKnown RBP19.25■□□□□ 0.67
THUMPD1-203ENST00000565248 VEZTQ9HBM0 779 aa19.25■□□□□ 0.67
THUMPD1-203ENST00000565248 SH2B1Q9NRF2 756 aaPredicted RBP19.25■□□□□ 0.67
THUMPD1-203ENST00000565248 TAOK2Q9UL54 1235 aa19.25■□□□□ 0.67
THUMPD1-203ENST00000565248 BRCA2P51587 3418 aa19.25■□□□□ 0.67
THUMPD1-203ENST00000565248 BAZ2AQ9UIF9 1905 aaKnown RBP19.24■□□□□ 0.67
THUMPD1-203ENST00000565248 ERICH2A1L162 156 aa19.24■□□□□ 0.67
THUMPD1-203ENST00000565248 KDM4AO75164 1064 aa19.24■□□□□ 0.67
THUMPD1-203ENST00000565248 FGRP09769 529 aa19.24■□□□□ 0.67
THUMPD1-203ENST00000565248 CYP2D6P10635 497 aa19.24■□□□□ 0.67
THUMPD1-203ENST00000565248 SLC4A3P48751 1232 aa19.24■□□□□ 0.67
THUMPD1-203ENST00000565248 STK11IPQ8N1F8 1099 aa19.24■□□□□ 0.67
THUMPD1-203ENST00000565248 FBXL16Q8N461 479 aa19.24■□□□□ 0.67
THUMPD1-203ENST00000565248 CHMP4CQ96CF2 233 aa19.24■□□□□ 0.67
THUMPD1-203ENST00000565248 TMX3Q96JJ7 454 aa19.24■□□□□ 0.67
THUMPD1-203ENST00000565248 TCEANC2Q96MN5 208 aa19.24■□□□□ 0.67
THUMPD1-203ENST00000565248 MKNK2Q9HBH9 465 aa19.24■□□□□ 0.67
THUMPD1-203ENST00000565248 CLRN2A0PK11 232 aa19.23■□□□□ 0.67
THUMPD1-203ENST00000565248 SLC4A8Q2Y0W8 1093 aa19.23■□□□□ 0.67
THUMPD1-203ENST00000565248 SPDYE2Q495Y8 402 aa19.23■□□□□ 0.67
THUMPD1-203ENST00000565248 SLC9C1Q4G0N8 1177 aa19.23■□□□□ 0.67
THUMPD1-203ENST00000565248 NBPF12Q5TAG4 269 aaPredicted RBP19.23■□□□□ 0.67
THUMPD1-203ENST00000565248 FKBP1CQ5VVH2 108 aa19.23■□□□□ 0.67
THUMPD1-203ENST00000565248 UBAC1Q9BSL1 405 aa19.23■□□□□ 0.67
THUMPD1-203ENST00000565248 DDX4Q9NQI0 724 aaKnown RBP19.23■□□□□ 0.67
THUMPD1-203ENST00000565248 ZNF70Q9UC06 446 aaPredicted RBP19.23■□□□□ 0.67
THUMPD1-203ENST00000565248 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.23■□□□□ 0.67
THUMPD1-203ENST00000565248 PCDHAC2Q9Y5I4 1007 aa19.23■□□□□ 0.67
THUMPD1-203ENST00000565248 SSC5DA1L4H1 1573 aa19.23■□□□□ 0.67
THUMPD1-203ENST00000565248 TESPA1A2RU30 521 aaPredicted RBP19.22■□□□□ 0.67
THUMPD1-203ENST00000565248 RANBP6O60518 1105 aaKnown RBP19.22■□□□□ 0.67
THUMPD1-203ENST00000565248 USP2O75604 605 aaPredicted RBP19.22■□□□□ 0.67
THUMPD1-203ENST00000565248 TNFAIP1Q13829 316 aa19.22■□□□□ 0.67
THUMPD1-203ENST00000565248 IQCA1Q86XH1 822 aa19.22■□□□□ 0.67
THUMPD1-203ENST00000565248 ZSCAN29Q8IWY8 852 aaPredicted RBP19.22■□□□□ 0.67
THUMPD1-203ENST00000565248 BRF1Q92994 677 aa19.22■□□□□ 0.67
THUMPD1-203ENST00000565248 TRIM34Q9BYJ4 488 aa19.22■□□□□ 0.67
THUMPD1-203ENST00000565248 ZFYVE28Q9HCC9 887 aa19.22■□□□□ 0.67
THUMPD1-203ENST00000565248 FOCADQ5VW36 1801 aa19.22■□□□□ 0.67
THUMPD1-203ENST00000565248 IFIT3O14879 490 aaKnown RBP19.21■□□□□ 0.67
THUMPD1-203ENST00000565248 TNNI2P48788 182 aa19.21■□□□□ 0.67
THUMPD1-203ENST00000565248 NFIAQ12857 509 aa19.21■□□□□ 0.67
THUMPD1-203ENST00000565248 TOB2Q14106 344 aaPredicted RBP19.21■□□□□ 0.67
THUMPD1-203ENST00000565248 RASA3Q14644 834 aa19.21■□□□□ 0.67
THUMPD1-203ENST00000565248 CCDC178Q5BJE1 867 aa19.21■□□□□ 0.67
THUMPD1-203ENST00000565248 DDX60LQ5H9U9 1706 aaKnown RBP19.21■□□□□ 0.67
THUMPD1-203ENST00000565248 C16orf86Q6ZW13 317 aa19.21■□□□□ 0.67
THUMPD1-203ENST00000565248 ZNF444Q8N0Y2 327 aaPredicted RBP19.21■□□□□ 0.67
THUMPD1-203ENST00000565248 OPTNQ96CV9 577 aa19.21■□□□□ 0.67
THUMPD1-203ENST00000565248 ZNF333Q96JL9 665 aa19.21■□□□□ 0.67
THUMPD1-203ENST00000565248 CDK5RAP2Q96SN8 1893 aa19.21■□□□□ 0.67
THUMPD1-203ENST00000565248 PTPN18Q99952 460 aa19.21■□□□□ 0.67
THUMPD1-203ENST00000565248 LRRC2Q9BYS8 371 aa19.21■□□□□ 0.67
THUMPD1-203ENST00000565248 AGXT2Q9BYV1 514 aa19.21■□□□□ 0.67
THUMPD1-203ENST00000565248 SWAP70Q9UH65 585 aa19.21■□□□□ 0.67
THUMPD1-203ENST00000565248 COL2A1P02458 1487 aaPredicted RBP19.21■□□□□ 0.67
THUMPD1-203ENST00000565248 GJA5P36382 358 aa19.2■□□□□ 0.66
THUMPD1-203ENST00000565248 PLCD1P51178 756 aa19.2■□□□□ 0.66
THUMPD1-203ENST00000565248 CACNB3P54284 484 aa19.2■□□□□ 0.66
THUMPD1-203ENST00000565248 ANTXR2P58335 489 aa19.2■□□□□ 0.66
THUMPD1-203ENST00000565248 TCP10Q12799 353 aa19.2■□□□□ 0.66
THUMPD1-203ENST00000565248 TMEM67Q5HYA8 995 aa19.2■□□□□ 0.66
THUMPD1-203ENST00000565248 CYB5R4Q7L1T6 521 aa19.2■□□□□ 0.66
THUMPD1-203ENST00000565248 CHST3Q7LGC8 479 aa19.2■□□□□ 0.66
THUMPD1-203ENST00000565248 TMTC2Q8N394 836 aa19.2■□□□□ 0.66
THUMPD1-203ENST00000565248 EHD4Q9H223 541 aa19.2■□□□□ 0.66
THUMPD1-203ENST00000565248 INCENPQ9NQS7 918 aa19.2■□□□□ 0.66
THUMPD1-203ENST00000565248 ZSWIM5Q9P217 1185 aa19.2■□□□□ 0.66
THUMPD1-203ENST00000565248 FAM198AQ9UFP1 575 aa19.2■□□□□ 0.66
THUMPD1-203ENST00000565248 SERPINB13Q9UIV8 391 aa19.2■□□□□ 0.66
THUMPD1-203ENST00000565248 COLQQ9Y215 455 aaPredicted RBP19.2■□□□□ 0.66
THUMPD1-203ENST00000565248 MYH1P12882 1939 aa19.19■□□□□ 0.66
THUMPD1-203ENST00000565248 TSPY2A6NKD2 308 aa19.19■□□□□ 0.66
THUMPD1-203ENST00000565248 PRDM1O75626 825 aa19.19■□□□□ 0.66
THUMPD1-203ENST00000565248 GTF2A2P52657 109 aa19.19■□□□□ 0.66
THUMPD1-203ENST00000565248 TAF1CQ15572 869 aaPredicted RBP19.19■□□□□ 0.66
THUMPD1-203ENST00000565248 CRACR2BQ8N4Y2 399 aaPredicted RBP19.19■□□□□ 0.66
THUMPD1-203ENST00000565248 FAM151AQ8WW52 585 aa19.19■□□□□ 0.66
THUMPD1-203ENST00000565248 DYNLL2Q96FJ2 89 aa19.19■□□□□ 0.66
THUMPD1-203ENST00000565248 ELP3Q9H9T3 547 aa19.19■□□□□ 0.66
THUMPD1-203ENST00000565248 PI4KBQ9UBF8 816 aa19.19■□□□□ 0.66
THUMPD1-203ENST00000565248 TCP10L2B9ZVM9 353 aa19.18■□□□□ 0.66
THUMPD1-203ENST00000565248 SH2B2O14492 632 aaPredicted RBP19.18■□□□□ 0.66
THUMPD1-203ENST00000565248 LIFRP42702 1097 aa19.18■□□□□ 0.66
THUMPD1-203ENST00000565248 CDK8P49336 464 aa19.18■□□□□ 0.66
THUMPD1-203ENST00000565248 CUL4AQ13619 759 aa19.18■□□□□ 0.66
THUMPD1-203ENST00000565248 COL9A3Q14050 684 aaPredicted RBP19.18■□□□□ 0.66
THUMPD1-203ENST00000565248 KIF22Q14807 665 aa19.18■□□□□ 0.66
THUMPD1-203ENST00000565248 WTAPQ15007 396 aa19.18■□□□□ 0.66
THUMPD1-203ENST00000565248 SYNE3Q6ZMZ3 975 aa19.18■□□□□ 0.66
THUMPD1-203ENST00000565248 NFXL1Q6ZNB6 911 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms