RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 IFIT1BQ5T764 474 aaKnown RBP8.68□□□□□ -1.02
ATXN3-249ENST00000564606 ARL6IP4Q66PJ3 421 aaKnown RBP8.68□□□□□ -1.02
ATXN3-249ENST00000564606 ZNF771Q7L3S4 317 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-249ENST00000564606 CCDC148Q8NFR7 591 aa8.68□□□□□ -1.02
ATXN3-249ENST00000564606 CCDC12Q8WUD4 166 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-249ENST00000564606 PIGBQ92521 554 aa8.68□□□□□ -1.02
ATXN3-249ENST00000564606 L3MBTL3Q96JM7 780 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-249ENST00000564606 NYXQ9GZU5 481 aa8.68□□□□□ -1.02
ATXN3-249ENST00000564606 ANKRD2Q9GZV1 360 aa8.68□□□□□ -1.02
ATXN3-249ENST00000564606 TSPYL1Q9H0U9 437 aa8.68□□□□□ -1.02
ATXN3-249ENST00000564606 TMX1Q9H3N1 280 aa8.68□□□□□ -1.02
ATXN3-249ENST00000564606 SH3GLB2Q9NR46 395 aa8.68□□□□□ -1.02
ATXN3-249ENST00000564606 TRMT1Q9NXH9 659 aaKnown RBP8.68□□□□□ -1.02
ATXN3-249ENST00000564606 RAI14Q9P0K7 980 aa8.68□□□□□ -1.02
ATXN3-249ENST00000564606 ZSWIM5Q9P217 1185 aa8.68□□□□□ -1.02
ATXN3-249ENST00000564606 PCDHA5Q9Y5H7 936 aa8.68□□□□□ -1.02
ATXN3-249ENST00000564606 UBN2Q6ZU65 1347 aa8.68□□□□□ -1.02
ATXN3-249ENST00000564606 BCL9O00512 1426 aa8.68□□□□□ -1.02
ATXN3-249ENST00000564606 LAMA4Q16363 1823 aa8.68□□□□□ -1.02
ATXN3-249ENST00000564606 MYH7P12883 1935 aa8.68□□□□□ -1.02
ATXN3-249ENST00000564606 TCRBV5S4A2TA0A5A2 114 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 BIN1O00499 593 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 IPO7O95373 1038 aaKnown RBP8.67□□□□□ -1.02
ATXN3-249ENST00000564606 PIP4K2BP78356 416 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 PPARAQ07869 468 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 ORC2Q13416 577 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-249ENST00000564606 MORC3Q14149 939 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 NCAPHQ15003 741 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 BRD3Q15059 726 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 E4F1Q66K89 784 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-249ENST00000564606 IQCEQ6IPM2 695 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 CCDC70Q6NSX1 233 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 SHC4Q6S5L8 630 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 ITIH6Q6UXX5 1313 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 SYT10Q6XYQ8 523 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 CYB5R4Q7L1T6 521 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 NBPF11Q86T75 865 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 TMTC1Q8IUR5 882 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 TBC1D10CQ8IV04 446 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 ANKRD18AQ8IVF6 992 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 FAM114A1Q8IWE2 563 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 ZNF654Q8IZM8 581 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 PDILTQ8N807 584 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 GOLGA1Q92805 767 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 UPF1Q92900 1129 aaKnown RBP eCLIP8.67□□□□□ -1.02
ATXN3-249ENST00000564606 RPGRIP1Q96KN7 1286 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 LZTS2Q9BRK4 669 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 CRNKL1Q9BZJ0 848 aaKnown RBP8.67□□□□□ -1.02
ATXN3-249ENST00000564606 FTOQ9C0B1 505 aaKnown RBP eCLIP8.67□□□□□ -1.02
ATXN3-249ENST00000564606 CUEDC2Q9H467 287 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 SLC24A3Q9HC58 644 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 PIH1D3Q9NQM4 214 aaKnown RBP8.67□□□□□ -1.02
ATXN3-249ENST00000564606 ATP8A2Q9NTI2 1148 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 CCDC87Q9NVE4 849 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 CWC15Q9P013 229 aaKnown RBP8.67□□□□□ -1.02
ATXN3-249ENST00000564606 CALCOCO1Q9P1Z2 691 aa8.67□□□□□ -1.02
ATXN3-249ENST00000564606 ZNF215Q9UL58 517 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-249ENST00000564606 TIAM2Q8IVF5 1701 aa8.66□□□□□ -1.02
ATXN3-249ENST00000564606 GSG1L2A8MUP6 293 aa8.66□□□□□ -1.02
ATXN3-249ENST00000564606 KIF28PB7ZC32 967 aa8.66□□□□□ -1.02
ATXN3-249ENST00000564606 POLR2DO15514 142 aaKnown RBP8.66□□□□□ -1.02
ATXN3-249ENST00000564606 WDHD1O75717 1129 aaPredicted RBP8.66□□□□□ -1.02
ATXN3-249ENST00000564606 ZMYND10O75800 440 aa8.66□□□□□ -1.02
ATXN3-249ENST00000564606 URI1O94763 535 aaPredicted RBP8.66□□□□□ -1.02
ATXN3-249ENST00000564606 FGFR1OPO95684 399 aaKnown RBP8.66□□□□□ -1.02
ATXN3-249ENST00000564606 CYP7A1P22680 504 aa8.66□□□□□ -1.02
ATXN3-249ENST00000564606 LONP1P36776 959 aaKnown RBP8.66□□□□□ -1.02
ATXN3-249ENST00000564606 PHKA1P46020 1223 aa8.66□□□□□ -1.02
ATXN3-249ENST00000564606 SARSP49591 514 aaKnown RBP8.66□□□□□ -1.02
ATXN3-249ENST00000564606 GSTO1P78417 241 aa8.66□□□□□ -1.02
ATXN3-249ENST00000564606 RRP12Q5JTH9 1297 aaKnown RBP8.66□□□□□ -1.02
ATXN3-249ENST00000564606 ARMCX5Q6P1M9 558 aa8.66□□□□□ -1.02
ATXN3-249ENST00000564606 MSL3Q8N5Y2 521 aaKnown RBP8.66□□□□□ -1.02
ATXN3-249ENST00000564606 GOLGA6L1Q8N7Z2 621 aa8.66□□□□□ -1.02
ATXN3-249ENST00000564606 OXER1Q8TDS5 423 aa8.66□□□□□ -1.02
ATXN3-249ENST00000564606 RABGGTAQ92696 567 aa8.66□□□□□ -1.02
ATXN3-249ENST00000564606 ZSCAN10Q96SZ4 725 aaPredicted RBP8.66□□□□□ -1.02
ATXN3-249ENST00000564606 LRRC27Q9C0I9 530 aa8.66□□□□□ -1.02
ATXN3-249ENST00000564606 ARFGAP3Q9NP61 516 aa8.66□□□□□ -1.02
ATXN3-249ENST00000564606 ARPP21Q9UBL0 812 aaPredicted RBP8.66□□□□□ -1.02
ATXN3-249ENST00000564606 PPP2R2CQ9Y2T4 447 aa8.66□□□□□ -1.02
ATXN3-249ENST00000564606 NFE2L3Q9Y4A8 694 aa8.66□□□□□ -1.02
ATXN3-249ENST00000564606 H7C1D1 291 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 FOXP2O15409 715 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 ORC4O43929 436 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 LDHCP07864 332 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 ZSCAN20P17040 1043 aaPredicted RBP8.65□□□□□ -1.02
ATXN3-249ENST00000564606 GPTP24298 496 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 CDC27P30260 824 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 EIF5P55010 431 aaKnown RBP8.65□□□□□ -1.02
ATXN3-249ENST00000564606 GNG11P61952 73 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 AMPD3Q01432 767 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 PNOCQ13519 176 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 SCARF1Q14162 830 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 LONRF3Q496Y0 759 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 MAP9Q49MG5 647 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 ARHGAP29Q52LW3 1261 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 CCDC93Q567U6 631 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 OTUD7BQ6GQQ9 843 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 METTL16Q86W50 562 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms