RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 ATAD5Q96QE3 1844 aa19.78■□□□□ 0.76
RNF40-206ENST00000564260 TRIM75PA6NK02 468 aa19.77■□□□□ 0.76
RNF40-206ENST00000564260 TSPY3P0CV98 308 aa19.77■□□□□ 0.76
RNF40-206ENST00000564260 TSPY8P0CW00 308 aa19.77■□□□□ 0.76
RNF40-206ENST00000564260 GUCY1A2P33402 732 aa19.77■□□□□ 0.76
RNF40-206ENST00000564260 JAG1P78504 1218 aa19.77■□□□□ 0.76
RNF40-206ENST00000564260 USP17L2Q6R6M4 530 aa19.77■□□□□ 0.76
RNF40-206ENST00000564260 LPAR1Q92633 364 aa19.77■□□□□ 0.76
RNF40-206ENST00000564260 TMOD4Q9NZQ9 345 aa19.77■□□□□ 0.76
RNF40-206ENST00000564260 NYAP2Q9P242 653 aa19.77■□□□□ 0.76
RNF40-206ENST00000564260 PNMA3Q9UL41 463 aa19.77■□□□□ 0.76
RNF40-206ENST00000564260 AGTPBP1Q9UPW5 1226 aa19.77■□□□□ 0.76
RNF40-206ENST00000564260 IGKV6D-41A0A0C4DH26 115 aa19.76■□□□□ 0.75
RNF40-206ENST00000564260 REC8O95072 547 aa19.76■□□□□ 0.75
RNF40-206ENST00000564260 MOGSQ13724 837 aa19.76■□□□□ 0.75
RNF40-206ENST00000564260 SEPT2Q15019 361 aa19.76■□□□□ 0.75
RNF40-206ENST00000564260 CCDC178Q5BJE1 867 aa19.76■□□□□ 0.75
RNF40-206ENST00000564260 ESR2Q92731 530 aa19.76■□□□□ 0.75
RNF40-206ENST00000564260 PTPN18Q99952 460 aa19.76■□□□□ 0.75
RNF40-206ENST00000564260 LSG1Q9H089 658 aaKnown RBP19.76■□□□□ 0.75
RNF40-206ENST00000564260 TCP11L1Q9NUJ3 509 aa19.76■□□□□ 0.75
RNF40-206ENST00000564260 RNF186Q9NXI6 227 aa19.76■□□□□ 0.75
RNF40-206ENST00000564260 PHIPQ8WWQ0 1821 aa19.76■□□□□ 0.75
RNF40-206ENST00000564260 TSPY2A6NKD2 308 aa19.75■□□□□ 0.75
RNF40-206ENST00000564260 BTBD19C9JJ37 291 aa19.75■□□□□ 0.75
RNF40-206ENST00000564260 IGF2BP3O00425 579 aaKnown RBP eCLIP19.75■□□□□ 0.75
RNF40-206ENST00000564260 HSPA1AP0DMV8 641 aaKnown RBP19.75■□□□□ 0.75
RNF40-206ENST00000564260 HSPA1BP0DMV9 641 aaKnown RBP19.75■□□□□ 0.75
RNF40-206ENST00000564260 CTCFP49711 727 aaPredicted RBP19.75■□□□□ 0.75
RNF40-206ENST00000564260 MTMR2Q13614 643 aa19.75■□□□□ 0.75
RNF40-206ENST00000564260 MKL1Q969V6 931 aa19.75■□□□□ 0.75
RNF40-206ENST00000564260 PARK7Q99497 189 aaKnown RBP19.75■□□□□ 0.75
RNF40-206ENST00000564260 FEZ1Q99689 392 aa19.75■□□□□ 0.75
RNF40-206ENST00000564260 KRT23Q9C075 422 aa19.75■□□□□ 0.75
RNF40-206ENST00000564260 ANO2Q9NQ90 1003 aa19.75■□□□□ 0.75
RNF40-206ENST00000564260 TMX2Q9Y320 296 aa19.75■□□□□ 0.75
RNF40-206ENST00000564260 LAMA4Q16363 1823 aa19.74■□□□□ 0.75
RNF40-206ENST00000564260 SMIM22K7EJ46 135 aa19.74■□□□□ 0.75
RNF40-206ENST00000564260 TTLL1O95922 423 aa19.74■□□□□ 0.75
RNF40-206ENST00000564260 HOXA7P31268 230 aaPredicted RBP19.74■□□□□ 0.75
RNF40-206ENST00000564260 NOVP48745 357 aa19.74■□□□□ 0.75
RNF40-206ENST00000564260 TFAP4Q01664 338 aa19.74■□□□□ 0.75
RNF40-206ENST00000564260 CTDSPL2Q05D32 466 aa19.74■□□□□ 0.75
RNF40-206ENST00000564260 RNF20Q5VTR2 975 aa19.74■□□□□ 0.75
RNF40-206ENST00000564260 GTF3C2Q8WUA4 911 aaPredicted RBP19.74■□□□□ 0.75
RNF40-206ENST00000564260 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.74■□□□□ 0.75
RNF40-206ENST00000564260 ZFYVE28Q9HCC9 887 aa19.74■□□□□ 0.75
RNF40-206ENST00000564260 MTMR4Q9NYA4 1195 aa19.74■□□□□ 0.75
RNF40-206ENST00000564260 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.74■□□□□ 0.75
RNF40-206ENST00000564260 MYH8P13535 1937 aa19.73■□□□□ 0.75
RNF40-206ENST00000564260 GREB1LQ9C091 1923 aaPredicted RBP19.73■□□□□ 0.75
RNF40-206ENST00000564260 PRDM1O75626 825 aa19.73■□□□□ 0.75
RNF40-206ENST00000564260 HMGCS2P54868 508 aa19.73■□□□□ 0.75
RNF40-206ENST00000564260 PTH1RQ03431 593 aa19.73■□□□□ 0.75
RNF40-206ENST00000564260 TRDNQ13061 729 aa19.73■□□□□ 0.75
RNF40-206ENST00000564260 TTC14Q96N46 770 aa19.73■□□□□ 0.75
RNF40-206ENST00000564260 RBM8AQ9Y5S9 174 aaKnown RBP19.73■□□□□ 0.75
RNF40-206ENST00000564260 LOC285556D6RIA3 1793 aa19.72■□□□□ 0.75
RNF40-206ENST00000564260 PDHXO00330 501 aa19.72■□□□□ 0.75
RNF40-206ENST00000564260 RANBP6O60518 1105 aaKnown RBP19.72■□□□□ 0.75
RNF40-206ENST00000564260 HAND2P61296 217 aa19.72■□□□□ 0.75
RNF40-206ENST00000564260 SHROOM1Q2M3G4 852 aaPredicted RBP19.72■□□□□ 0.75
RNF40-206ENST00000564260 GPAT2Q6NUI2 795 aa19.72■□□□□ 0.75
RNF40-206ENST00000564260 TBC1D10CQ8IV04 446 aa19.72■□□□□ 0.75
RNF40-206ENST00000564260 FAM43AQ8N2R8 423 aa19.72■□□□□ 0.75
RNF40-206ENST00000564260 NBPF3Q9H094 633 aa19.72■□□□□ 0.75
RNF40-206ENST00000564260 VCPKMTQ9H867 229 aa19.72■□□□□ 0.75
RNF40-206ENST00000564260 GOPCQ9HD26 462 aa19.72■□□□□ 0.75
RNF40-206ENST00000564260 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.72■□□□□ 0.75
RNF40-206ENST00000564260 TRPA1O75762 1119 aa19.71■□□□□ 0.75
RNF40-206ENST00000564260 CYP21A2P08686 494 aa19.71■□□□□ 0.75
RNF40-206ENST00000564260 EEF2P13639 858 aaKnown RBP19.71■□□□□ 0.75
RNF40-206ENST00000564260 TAF1CQ15572 869 aaPredicted RBP19.71■□□□□ 0.75
RNF40-206ENST00000564260 GADL1Q6ZQY3 521 aa19.71■□□□□ 0.75
RNF40-206ENST00000564260 CCDC84Q86UT8 332 aaPredicted RBP19.71■□□□□ 0.75
RNF40-206ENST00000564260 IQCA1Q86XH1 822 aa19.71■□□□□ 0.75
RNF40-206ENST00000564260 SIAH1Q8IUQ4 282 aa19.71■□□□□ 0.75
RNF40-206ENST00000564260 CEP95Q96GE4 821 aa19.71■□□□□ 0.75
RNF40-206ENST00000564260 MTA3Q9BTC8 594 aa19.71■□□□□ 0.75
RNF40-206ENST00000564260 TLR2O60603 784 aa19.7■□□□□ 0.74
RNF40-206ENST00000564260 OSBPP22059 807 aa19.7■□□□□ 0.74
RNF40-206ENST00000564260 NECTIN1Q15223 517 aa19.7■□□□□ 0.74
RNF40-206ENST00000564260 GMCL1P1Q8NEA9 526 aa19.7■□□□□ 0.74
RNF40-206ENST00000564260 ACER1Q8TDN7 264 aa19.7■□□□□ 0.74
RNF40-206ENST00000564260 PRDM10Q9NQV6 1147 aa19.7■□□□□ 0.74
RNF40-206ENST00000564260 TOMM22Q9NS69 142 aa19.7■□□□□ 0.74
RNF40-206ENST00000564260 EMILIN3Q9NT22 766 aa19.7■□□□□ 0.74
RNF40-206ENST00000564260 PTPRFP10586 1907 aa19.7■□□□□ 0.74
RNF40-206ENST00000564260 A0A1W2PRG0 241 aa19.69■□□□□ 0.74
RNF40-206ENST00000564260 USP17L15C9J2P7 530 aa19.69■□□□□ 0.74
RNF40-206ENST00000564260 USP17L13C9JLJ4 530 aa19.69■□□□□ 0.74
RNF40-206ENST00000564260 USP17L11C9JVI0 530 aa19.69■□□□□ 0.74
RNF40-206ENST00000564260 USP17L18D6R9N7 530 aa19.69■□□□□ 0.74
RNF40-206ENST00000564260 USP17L22D6RA61 530 aa19.69■□□□□ 0.74
RNF40-206ENST00000564260 USP17L17D6RBQ6 530 aa19.69■□□□□ 0.74
RNF40-206ENST00000564260 USP17L19D6RCP7 530 aa19.69■□□□□ 0.74
RNF40-206ENST00000564260 USP17L20D6RJB6 530 aa19.69■□□□□ 0.74
RNF40-206ENST00000564260 WDR46O15213 610 aaKnown RBP19.69■□□□□ 0.74
RNF40-206ENST00000564260 FOXN1O15353 648 aa19.69■□□□□ 0.74
RNF40-206ENST00000564260 GCLCP48506 637 aaPredicted RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms