RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 EVX2Q03828 476 aa11.5□□□□□ -0.57
UBFD1-203ENST00000564106 ALX1Q15699 326 aa11.5□□□□□ -0.57
UBFD1-203ENST00000564106 OTUD7BQ6GQQ9 843 aa11.5□□□□□ -0.57
UBFD1-203ENST00000564106 NAA16Q6N069 864 aaPredicted RBP11.5□□□□□ -0.57
UBFD1-203ENST00000564106 SH3TC2Q8TF17 1288 aa11.5□□□□□ -0.57
UBFD1-203ENST00000564106 ARMC5Q96C12 935 aa11.5□□□□□ -0.57
UBFD1-203ENST00000564106 TRIM47Q96LD4 638 aa11.5□□□□□ -0.57
UBFD1-203ENST00000564106 NEK1Q96PY6 1258 aa11.5□□□□□ -0.57
UBFD1-203ENST00000564106 LIMCH1Q9UPQ0 1083 aa11.5□□□□□ -0.57
UBFD1-203ENST00000564106 AFG3L2Q9Y4W6 797 aa11.5□□□□□ -0.57
UBFD1-203ENST00000564106 PATL2C9JE40 543 aaKnown RBP11.49□□□□□ -0.57
UBFD1-203ENST00000564106 PEX10O60683 326 aa11.49□□□□□ -0.57
UBFD1-203ENST00000564106 APPP05067 770 aa11.49□□□□□ -0.57
UBFD1-203ENST00000564106 CYP7A1P22680 504 aa11.49□□□□□ -0.57
UBFD1-203ENST00000564106 SLC4A8Q2Y0W8 1093 aa11.49□□□□□ -0.57
UBFD1-203ENST00000564106 ADCK5Q3MIX3 580 aa11.49□□□□□ -0.57
UBFD1-203ENST00000564106 TREML2Q5T2D2 321 aa11.49□□□□□ -0.57
UBFD1-203ENST00000564106 ANKRD23Q86SG2 305 aa11.49□□□□□ -0.57
UBFD1-203ENST00000564106 ZSCAN29Q8IWY8 852 aaPredicted RBP11.49□□□□□ -0.57
UBFD1-203ENST00000564106 SLF2Q8IX21 1173 aa11.49□□□□□ -0.57
UBFD1-203ENST00000564106 TMX3Q96JJ7 454 aa11.49□□□□□ -0.57
UBFD1-203ENST00000564106 ZNF333Q96JL9 665 aa11.49□□□□□ -0.57
UBFD1-203ENST00000564106 STRBPQ96SI9 672 aaKnown RBP11.49□□□□□ -0.57
UBFD1-203ENST00000564106 OSBPL5Q9H0X9 879 aaPredicted RBP11.49□□□□□ -0.57
UBFD1-203ENST00000564106 AATFQ9NY61 560 aaKnown RBP eCLIP11.49□□□□□ -0.57
UBFD1-203ENST00000564106 ZHX2Q9Y6X8 837 aa11.49□□□□□ -0.57
UBFD1-203ENST00000564106 A0A0G2JLL6 359 aaPredicted RBP11.48□□□□□ -0.57
UBFD1-203ENST00000564106 MAGEB6P1A0A0J9YX57 407 aa11.48□□□□□ -0.57
UBFD1-203ENST00000564106 TRIM75PA6NK02 468 aa11.48□□□□□ -0.57
UBFD1-203ENST00000564106 MBD4O95243 580 aa11.48□□□□□ -0.57
UBFD1-203ENST00000564106 FGAP02671 866 aa11.48□□□□□ -0.57
UBFD1-203ENST00000564106 CHGBP05060 677 aa11.48□□□□□ -0.57
UBFD1-203ENST00000564106 LDHCP07864 332 aa11.48□□□□□ -0.57
UBFD1-203ENST00000564106 BCRP11274 1271 aa11.48□□□□□ -0.57
UBFD1-203ENST00000564106 PDIA4P13667 645 aaKnown RBP11.48□□□□□ -0.57
UBFD1-203ENST00000564106 AK2P54819 239 aa11.48□□□□□ -0.57
UBFD1-203ENST00000564106 TRDNQ13061 729 aa11.48□□□□□ -0.57
UBFD1-203ENST00000564106 CUL4AQ13619 759 aa11.48□□□□□ -0.57
UBFD1-203ENST00000564106 SLFNL1Q499Z3 407 aa11.48□□□□□ -0.57
UBFD1-203ENST00000564106 GIMAP6Q6P9H5 292 aa11.48□□□□□ -0.57
UBFD1-203ENST00000564106 PRRT2Q7Z6L0 340 aaPredicted RBP11.48□□□□□ -0.57
UBFD1-203ENST00000564106 RALYLQ86SE5 291 aaKnown RBP11.48□□□□□ -0.57
UBFD1-203ENST00000564106 NOL10Q9BSC4 688 aaKnown RBP11.48□□□□□ -0.57
UBFD1-203ENST00000564106 NAPBQ9H115 298 aa11.48□□□□□ -0.57
UBFD1-203ENST00000564106 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.48□□□□□ -0.57
UBFD1-203ENST00000564106 WDR19Q8NEZ3 1342 aa11.48□□□□□ -0.57
UBFD1-203ENST00000564106 COL2A1P02458 1487 aaPredicted RBP11.48□□□□□ -0.57
UBFD1-203ENST00000564106 PLXNB2O15031 1838 aa11.48□□□□□ -0.57
UBFD1-203ENST00000564106 MYH1P12882 1939 aa11.48□□□□□ -0.57
UBFD1-203ENST00000564106 FLT1P17948 1338 aa11.47□□□□□ -0.57
UBFD1-203ENST00000564106 E7EWF7 191 aa11.47□□□□□ -0.57
UBFD1-203ENST00000564106 OSBPP22059 807 aa11.47□□□□□ -0.57
UBFD1-203ENST00000564106 NT5C2P49902 561 aa11.47□□□□□ -0.57
UBFD1-203ENST00000564106 NUCB2P80303 420 aa11.47□□□□□ -0.57
UBFD1-203ENST00000564106 FGD1P98174 961 aa11.47□□□□□ -0.57
UBFD1-203ENST00000564106 MTFR1Q15390 333 aa11.47□□□□□ -0.57
UBFD1-203ENST00000564106 DHX32Q7L7V1 743 aaKnown RBP11.47□□□□□ -0.57
UBFD1-203ENST00000564106 MAPKAPK5Q8IW41 473 aa11.47□□□□□ -0.57
UBFD1-203ENST00000564106 TEX11Q8IYF3 940 aa11.47□□□□□ -0.57
UBFD1-203ENST00000564106 NCOA7Q8NI08 942 aa11.47□□□□□ -0.57
UBFD1-203ENST00000564106 HOOK2Q96ED9 719 aa11.47□□□□□ -0.57
UBFD1-203ENST00000564106 CNNM2Q9H8M5 875 aa11.47□□□□□ -0.57
UBFD1-203ENST00000564106 GABRQQ9UN88 632 aa11.47□□□□□ -0.57
UBFD1-203ENST00000564106 CEP290O15078 2479 aa11.46□□□□□ -0.57
UBFD1-203ENST00000564106 BAG3O95817 575 aa11.46□□□□□ -0.57
UBFD1-203ENST00000564106 DDIT3P35638 169 aa11.46□□□□□ -0.57
UBFD1-203ENST00000564106 TDO2P48775 406 aa11.46□□□□□ -0.57
UBFD1-203ENST00000564106 POTEEQ6S8J3 1075 aa11.46□□□□□ -0.57
UBFD1-203ENST00000564106 GADL1Q6ZQY3 521 aa11.46□□□□□ -0.57
UBFD1-203ENST00000564106 IFNL3Q8IZI9 196 aa11.46□□□□□ -0.57
UBFD1-203ENST00000564106 FBXL16Q8N461 479 aa11.46□□□□□ -0.57
UBFD1-203ENST00000564106 SPRYD3Q8NCJ5 442 aa11.46□□□□□ -0.57
UBFD1-203ENST00000564106 TGFBRAP1Q8WUH2 860 aa11.46□□□□□ -0.57
UBFD1-203ENST00000564106 SHISA4Q96DD7 197 aa11.46□□□□□ -0.57
UBFD1-203ENST00000564106 CRNKL1Q9BZJ0 848 aaKnown RBP11.46□□□□□ -0.57
UBFD1-203ENST00000564106 RNF41Q9H4P4 317 aaPredicted RBP11.46□□□□□ -0.57
UBFD1-203ENST00000564106 ARMT1Q9H993 441 aa11.46□□□□□ -0.57
UBFD1-203ENST00000564106 ZCCHC17Q9NP64 241 aaKnown RBP11.46□□□□□ -0.57
UBFD1-203ENST00000564106 SAP30BPQ9UHR5 308 aaKnown RBP11.46□□□□□ -0.57
UBFD1-203ENST00000564106 SLC4A4Q9Y6R1 1079 aa11.46□□□□□ -0.57
UBFD1-203ENST00000564106 NAV1Q8NEY1 1877 aa11.46□□□□□ -0.58
UBFD1-203ENST00000564106 SMIM22K7EJ46 135 aa11.45□□□□□ -0.58
UBFD1-203ENST00000564106 CXCL11O14625 94 aa11.45□□□□□ -0.58
UBFD1-203ENST00000564106 FOXP2O15409 715 aa11.45□□□□□ -0.58
UBFD1-203ENST00000564106 TBC1D12O60347 775 aa11.45□□□□□ -0.58
UBFD1-203ENST00000564106 CTNND1O60716 968 aaKnown RBP11.45□□□□□ -0.58
UBFD1-203ENST00000564106 NPM3O75607 178 aaKnown RBP11.45□□□□□ -0.58
UBFD1-203ENST00000564106 PCP11498 1178 aaKnown RBP11.45□□□□□ -0.58
UBFD1-203ENST00000564106 MCM5P33992 734 aa11.45□□□□□ -0.58
UBFD1-203ENST00000564106 PSMC4P43686 418 aa11.45□□□□□ -0.58
UBFD1-203ENST00000564106 PRKCZQ05513 592 aa11.45□□□□□ -0.58
UBFD1-203ENST00000564106 LCORLQ8N3X6 602 aa11.45□□□□□ -0.58
UBFD1-203ENST00000564106 MIGA1Q8NAN2 632 aa11.45□□□□□ -0.58
UBFD1-203ENST00000564106 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.45□□□□□ -0.58
UBFD1-203ENST00000564106 GSG1L2A8MUP6 293 aa11.44□□□□□ -0.58
UBFD1-203ENST00000564106 GDF11O95390 407 aa11.44□□□□□ -0.58
UBFD1-203ENST00000564106 SLC34A2O95436 690 aa11.44□□□□□ -0.58
UBFD1-203ENST00000564106 PLCG2P16885 1265 aa11.44□□□□□ -0.58
UBFD1-203ENST00000564106 PPP4CP60510 307 aa11.44□□□□□ -0.58
UBFD1-203ENST00000564106 AMOTL1Q8IY63 956 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms