RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 PCDH11XQ9BZA7 1347 aa14.37□□□□□ -0.11
CCDC187-201ENST00000563590 PCDH11YQ9BZA8 1340 aa14.37□□□□□ -0.11
CCDC187-201ENST00000563590 B4E1Z4 1266 aa14.37□□□□□ -0.11
CCDC187-201ENST00000563590 RNF113AO15541 343 aaKnown RBP14.37□□□□□ -0.11
CCDC187-201ENST00000563590 KCTD16Q68DU8 428 aa14.37□□□□□ -0.11
CCDC187-201ENST00000563590 BMP6P22004 513 aa14.37□□□□□ -0.11
CCDC187-201ENST00000563590 TFR2Q9UP52 801 aa14.37□□□□□ -0.11
CCDC187-201ENST00000563590 PLEKHG2Q9H7P9 1386 aa14.37□□□□□ -0.11
CCDC187-201ENST00000563590 CDC25AP30304 524 aa14.37□□□□□ -0.11
CCDC187-201ENST00000563590 ATP6V1AP38606 617 aa14.37□□□□□ -0.11
CCDC187-201ENST00000563590 CDR1P51861 262 aa14.37□□□□□ -0.11
CCDC187-201ENST00000563590 CORO7P57737 925 aa14.37□□□□□ -0.11
CCDC187-201ENST00000563590 KRT40Q6A162 431 aa14.37□□□□□ -0.11
CCDC187-201ENST00000563590 RAD9BQ6WBX8 426 aa14.37□□□□□ -0.11
CCDC187-201ENST00000563590 SND1Q7KZF4 910 aaKnown RBP eCLIP14.37□□□□□ -0.11
CCDC187-201ENST00000563590 CXorf56Q9H5V9 222 aa14.37□□□□□ -0.11
CCDC187-201ENST00000563590 HPSEQ9Y251 543 aa14.37□□□□□ -0.11
CCDC187-201ENST00000563590 A0A087WUV0 522 aaPredicted RBP14.36□□□□□ -0.11
CCDC187-201ENST00000563590 PDE6BP35913 854 aa14.36□□□□□ -0.11
CCDC187-201ENST00000563590 IARSP41252 1262 aaKnown RBP14.36□□□□□ -0.11
CCDC187-201ENST00000563590 FMR1Q06787 632 aaKnown RBP eCLIP14.36□□□□□ -0.11
CCDC187-201ENST00000563590 FAM169AQ9Y6X4 670 aa14.36□□□□□ -0.11
CCDC187-201ENST00000563590 MACROD2A1Z1Q3 448 aa14.36□□□□□ -0.11
CCDC187-201ENST00000563590 TBX2Q13207 712 aaPredicted RBP14.36□□□□□ -0.11
CCDC187-201ENST00000563590 POSTNQ15063 836 aa14.36□□□□□ -0.11
CCDC187-201ENST00000563590 UIMC1Q96RL1 719 aa14.36□□□□□ -0.11
CCDC187-201ENST00000563590 MYO6Q9UM54 1294 aa14.36□□□□□ -0.11
CCDC187-201ENST00000563590 KCNJ14Q9UNX9 436 aa14.36□□□□□ -0.11
CCDC187-201ENST00000563590 GOLGA6BA6NDN3 693 aa14.36□□□□□ -0.11
CCDC187-201ENST00000563590 EIF5P55010 431 aaKnown RBP14.36□□□□□ -0.11
CCDC187-201ENST00000563590 ANTXR2P58335 489 aa14.36□□□□□ -0.11
CCDC187-201ENST00000563590 RABL6Q3YEC7 729 aaPredicted RBP14.36□□□□□ -0.11
CCDC187-201ENST00000563590 GGCXP38435 758 aa14.35□□□□□ -0.11
CCDC187-201ENST00000563590 CARD10Q9BWT7 1032 aa14.35□□□□□ -0.11
CCDC187-201ENST00000563590 TRIM10Q9UDY6 481 aa14.35□□□□□ -0.11
CCDC187-201ENST00000563590 L1RE1Q9UN81 338 aa14.35□□□□□ -0.11
CCDC187-201ENST00000563590 SOS2Q07890 1332 aaPredicted RBP14.35□□□□□ -0.11
CCDC187-201ENST00000563590 XAGE2Q96GT9 111 aa14.35□□□□□ -0.11
CCDC187-201ENST00000563590 PSD3Q9NYI0 1048 aa14.35□□□□□ -0.11
CCDC187-201ENST00000563590 TAB2Q9NYJ8 693 aa14.35□□□□□ -0.11
CCDC187-201ENST00000563590 ADGRG1Q9Y653 693 aa14.35□□□□□ -0.11
CCDC187-201ENST00000563590 MARF1Q9Y4F3 1742 aaKnown RBP14.35□□□□□ -0.11
CCDC187-201ENST00000563590 MAP2K7O14733 419 aa14.35□□□□□ -0.11
CCDC187-201ENST00000563590 IFIT3O14879 490 aaKnown RBP14.35□□□□□ -0.11
CCDC187-201ENST00000563590 CTDSPL2Q05D32 466 aa14.35□□□□□ -0.11
CCDC187-201ENST00000563590 CCDC122Q5T0U0 273 aa14.35□□□□□ -0.11
CCDC187-201ENST00000563590 CCDC181Q5TID7 509 aa14.35□□□□□ -0.11
CCDC187-201ENST00000563590 SCLT1Q96NL6 688 aa14.35□□□□□ -0.11
CCDC187-201ENST00000563590 GOLGA8AA7E2F4 631 aa14.34□□□□□ -0.11
CCDC187-201ENST00000563590 ABL1P00519 1130 aa14.34□□□□□ -0.11
CCDC187-201ENST00000563590 FGAP02671 866 aa14.34□□□□□ -0.11
CCDC187-201ENST00000563590 KRT9P35527 623 aa14.34□□□□□ -0.11
CCDC187-201ENST00000563590 PTPAQ15257 358 aa14.34□□□□□ -0.11
CCDC187-201ENST00000563590 ATG9AQ7Z3C6 839 aa14.34□□□□□ -0.11
CCDC187-201ENST00000563590 MB21D2Q8IYB1 491 aaPredicted RBP14.34□□□□□ -0.11
CCDC187-201ENST00000563590 ATG3Q9NT62 314 aa14.34□□□□□ -0.11
CCDC187-201ENST00000563590 MAN1B1Q9UKM7 699 aa14.34□□□□□ -0.11
CCDC187-201ENST00000563590 FAM170AA1A519 330 aa14.34□□□□□ -0.11
CCDC187-201ENST00000563590 RANBP6O60518 1105 aaKnown RBP14.34□□□□□ -0.11
CCDC187-201ENST00000563590 STARD3NLO95772 234 aa14.34□□□□□ -0.11
CCDC187-201ENST00000563590 SCARF1Q14162 830 aa14.34□□□□□ -0.11
CCDC187-201ENST00000563590 RESP18Q5W5W9 173 aa14.34□□□□□ -0.11
CCDC187-201ENST00000563590 TICAM2Q86XR7 235 aa14.34□□□□□ -0.11
CCDC187-201ENST00000563590 GNL3LQ9NVN8 582 aaKnown RBP14.34□□□□□ -0.11
CCDC187-201ENST00000563590 FOXP2O15409 715 aa14.33□□□□□ -0.11
CCDC187-201ENST00000563590 KRI1Q8N9T8 703 aaKnown RBP14.33□□□□□ -0.11
CCDC187-201ENST00000563590 NCOA7Q8NI08 942 aa14.33□□□□□ -0.11
CCDC187-201ENST00000563590 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.33□□□□□ -0.11
CCDC187-201ENST00000563590 NAPBQ9H115 298 aa14.33□□□□□ -0.11
CCDC187-201ENST00000563590 MED4Q9NPJ6 270 aa14.33□□□□□ -0.11
CCDC187-201ENST00000563590 GOLGB1Q14789 3259 aaKnown RBP14.33□□□□□ -0.12
CCDC187-201ENST00000563590 UBE2Q2LH0YL09 131 aa14.33□□□□□ -0.12
CCDC187-201ENST00000563590 ANKRD18AQ8IVF6 992 aa14.33□□□□□ -0.12
CCDC187-201ENST00000563590 KAT14Q9H8E8 782 aa14.33□□□□□ -0.12
CCDC187-201ENST00000563590 BCCIPQ9P287 314 aaKnown RBP eCLIP14.33□□□□□ -0.12
CCDC187-201ENST00000563590 NF2P35240 595 aa14.33□□□□□ -0.12
CCDC187-201ENST00000563590 CAPS2Q9BXY5 557 aa14.33□□□□□ -0.12
CCDC187-201ENST00000563590 PPP6R2O75170 966 aa14.32□□□□□ -0.12
CCDC187-201ENST00000563590 CTNND2Q9UQB3 1225 aa14.32□□□□□ -0.12
CCDC187-201ENST00000563590 RGPD2P0DJD1 1756 aa14.32□□□□□ -0.12
CCDC187-201ENST00000563590 BTBD18B2RXH4 712 aa14.32□□□□□ -0.12
CCDC187-201ENST00000563590 PPP2R5AQ15172 486 aa14.32□□□□□ -0.12
CCDC187-201ENST00000563590 RRAGBQ5VZM2 374 aa14.32□□□□□ -0.12
CCDC187-201ENST00000563590 NBPF26B4DH59 902 aa14.32□□□□□ -0.12
CCDC187-201ENST00000563590 EYA2O00167 538 aa14.32□□□□□ -0.12
CCDC187-201ENST00000563590 ZPR1O75312 459 aa14.32□□□□□ -0.12
CCDC187-201ENST00000563590 ERCC3P19447 782 aa14.32□□□□□ -0.12
CCDC187-201ENST00000563590 PDCLQ13371 301 aa14.32□□□□□ -0.12
CCDC187-201ENST00000563590 TMEM67Q5HYA8 995 aa14.32□□□□□ -0.12
CCDC187-201ENST00000563590 NBPF14Q5TI25 921 aa14.32□□□□□ -0.12
CCDC187-201ENST00000563590 NBPF10Q6P3W6 841 aaKnown RBP14.32□□□□□ -0.12
CCDC187-201ENST00000563590 NBPF15Q8N660 670 aa14.32□□□□□ -0.12
CCDC187-201ENST00000563590 BLZF1Q9H2G9 400 aa14.32□□□□□ -0.12
CCDC187-201ENST00000563590 YY1AP1Q9H869 796 aa14.32□□□□□ -0.12
CCDC187-201ENST00000563590 LTN1O94822 1766 aa14.32□□□□□ -0.12
CCDC187-201ENST00000563590 LMO7Q8WWI1 1683 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 MYO1FO00160 1098 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 CDKL5O76039 1030 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 ITGA6P23229 1130 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 SLC7A5Q01650 507 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms