RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 BACE1P56817 501 aa16.57■□□□□ 0.24
IFT140-205ENST00000561954 JAG1P78504 1218 aa16.57■□□□□ 0.24
IFT140-205ENST00000561954 SPP2Q13103 211 aa16.57■□□□□ 0.24
IFT140-205ENST00000561954 MTMR2Q13614 643 aa16.57■□□□□ 0.24
IFT140-205ENST00000561954 SEPT2Q15019 361 aa16.57■□□□□ 0.24
IFT140-205ENST00000561954 CCDC84Q86UT8 332 aaPredicted RBP16.57■□□□□ 0.24
IFT140-205ENST00000561954 IFNL1Q8IU54 200 aa16.57■□□□□ 0.24
IFT140-205ENST00000561954 PROCA1Q8NCQ7 364 aaPredicted RBP16.57■□□□□ 0.24
IFT140-205ENST00000561954 BRI3BPQ8WY22 251 aa16.57■□□□□ 0.24
IFT140-205ENST00000561954 LSG1Q9H089 658 aaKnown RBP16.57■□□□□ 0.24
IFT140-205ENST00000561954 CNNM2Q9H8M5 875 aa16.57■□□□□ 0.24
IFT140-205ENST00000561954 TOMM22Q9NS69 142 aa16.57■□□□□ 0.24
IFT140-205ENST00000561954 TMOD4Q9NZQ9 345 aa16.57■□□□□ 0.24
IFT140-205ENST00000561954 PCNTO95613 3336 aa16.57■□□□□ 0.24
IFT140-205ENST00000561954 GREB1LQ9C091 1923 aaPredicted RBP16.57■□□□□ 0.24
IFT140-205ENST00000561954 PTH1RQ03431 593 aa16.56■□□□□ 0.24
IFT140-205ENST00000561954 PABPC4Q13310 644 aaKnown RBP eCLIP16.56■□□□□ 0.24
IFT140-205ENST00000561954 SHROOM1Q2M3G4 852 aaPredicted RBP16.56■□□□□ 0.24
IFT140-205ENST00000561954 RNF20Q5VTR2 975 aa16.56■□□□□ 0.24
IFT140-205ENST00000561954 ANKRD23Q86SG2 305 aa16.56■□□□□ 0.24
IFT140-205ENST00000561954 TBC1D10CQ8IV04 446 aa16.56■□□□□ 0.24
IFT140-205ENST00000561954 ESR2Q92731 530 aa16.56■□□□□ 0.24
IFT140-205ENST00000561954 ZIC5Q96T25 663 aa16.56■□□□□ 0.24
IFT140-205ENST00000561954 KIAA1683Q9H0B3 1180 aa16.56■□□□□ 0.24
IFT140-205ENST00000561954 WBP1LQ9NX94 342 aa16.56■□□□□ 0.24
IFT140-205ENST00000561954 SYNPO2Q9UMS6 1093 aa16.56■□□□□ 0.24
IFT140-205ENST00000561954 RBM8AQ9Y5S9 174 aaKnown RBP16.56■□□□□ 0.24
IFT140-205ENST00000561954 RANBP6O60518 1105 aaKnown RBP16.55■□□□□ 0.24
IFT140-205ENST00000561954 GUCY1A2P33402 732 aa16.55■□□□□ 0.24
IFT140-205ENST00000561954 TRDNQ13061 729 aa16.55■□□□□ 0.24
IFT140-205ENST00000561954 SH3D19Q5HYK7 790 aa16.55■□□□□ 0.24
IFT140-205ENST00000561954 GADL1Q6ZQY3 521 aa16.55■□□□□ 0.24
IFT140-205ENST00000561954 NEDD1Q8NHV4 660 aa16.55■□□□□ 0.24
IFT140-205ENST00000561954 KRT23Q9C075 422 aa16.55■□□□□ 0.24
IFT140-205ENST00000561954 NBPF3Q9H094 633 aa16.55■□□□□ 0.24
IFT140-205ENST00000561954 AGTPBP1Q9UPW5 1226 aa16.55■□□□□ 0.24
IFT140-205ENST00000561954 SLC45A1Q9Y2W3 748 aa16.55■□□□□ 0.24
IFT140-205ENST00000561954 NEDD4P46934 1319 aa16.54■□□□□ 0.24
IFT140-205ENST00000561954 IGF2BP3O00425 579 aaKnown RBP eCLIP16.54■□□□□ 0.24
IFT140-205ENST00000561954 EPB41L2O43491 1005 aaKnown RBP16.54■□□□□ 0.24
IFT140-205ENST00000561954 HMGCS2P54868 508 aa16.54■□□□□ 0.24
IFT140-205ENST00000561954 TFAP4Q01664 338 aa16.54■□□□□ 0.24
IFT140-205ENST00000561954 RRP12Q5JTH9 1297 aaKnown RBP16.54■□□□□ 0.24
IFT140-205ENST00000561954 USP17L2Q6R6M4 530 aa16.54■□□□□ 0.24
IFT140-205ENST00000561954 C12orf42Q96LP6 360 aa16.54■□□□□ 0.24
IFT140-205ENST00000561954 CFHR5Q9BXR6 569 aa16.54■□□□□ 0.24
IFT140-205ENST00000561954 PNMA3Q9UL41 463 aa16.54■□□□□ 0.24
IFT140-205ENST00000561954 PTPRFP10586 1907 aa16.53■□□□□ 0.24
IFT140-205ENST00000561954 IGKV6D-41A0A0C4DH26 115 aa16.53■□□□□ 0.24
IFT140-205ENST00000561954 TTLL1O95922 423 aa16.53■□□□□ 0.24
IFT140-205ENST00000561954 CYP21A2P08686 494 aa16.53■□□□□ 0.24
IFT140-205ENST00000561954 HSPA1AP0DMV8 641 aaKnown RBP16.53■□□□□ 0.24
IFT140-205ENST00000561954 HSPA1BP0DMV9 641 aaKnown RBP16.53■□□□□ 0.24
IFT140-205ENST00000561954 RALYLQ86SE5 291 aaKnown RBP16.53■□□□□ 0.24
IFT140-205ENST00000561954 LPAR1Q92633 364 aa16.53■□□□□ 0.24
IFT140-205ENST00000561954 PARK7Q99497 189 aaKnown RBP16.53■□□□□ 0.24
IFT140-205ENST00000561954 GOPCQ9HD26 462 aa16.53■□□□□ 0.24
IFT140-205ENST00000561954 NYAP2Q9P242 653 aa16.53■□□□□ 0.24
IFT140-205ENST00000561954 BTBD19C9JJ37 291 aa16.52■□□□□ 0.24
IFT140-205ENST00000561954 ATP2B2Q01814 1243 aa16.52■□□□□ 0.24
IFT140-205ENST00000561954 MOGSQ13724 837 aa16.52■□□□□ 0.24
IFT140-205ENST00000561954 CCDC178Q5BJE1 867 aa16.52■□□□□ 0.24
IFT140-205ENST00000561954 FAM47AQ5JRC9 791 aa16.52■□□□□ 0.24
IFT140-205ENST00000561954 IQCA1Q86XH1 822 aa16.52■□□□□ 0.24
IFT140-205ENST00000561954 CEP95Q96GE4 821 aa16.52■□□□□ 0.24
IFT140-205ENST00000561954 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.52■□□□□ 0.24
IFT140-205ENST00000561954 RNF186Q9NXI6 227 aa16.52■□□□□ 0.24
IFT140-205ENST00000561954 MTMR4Q9NYA4 1195 aa16.52■□□□□ 0.24
IFT140-205ENST00000561954 TMX2Q9Y320 296 aa16.52■□□□□ 0.24
IFT140-205ENST00000561954 PDHXO00330 501 aa16.51■□□□□ 0.23
IFT140-205ENST00000561954 EEF2P13639 858 aaKnown RBP16.51■□□□□ 0.23
IFT140-205ENST00000561954 ZKSCAN1P17029 563 aaPredicted RBP16.51■□□□□ 0.23
IFT140-205ENST00000561954 TAF1CQ15572 869 aaPredicted RBP16.51■□□□□ 0.23
IFT140-205ENST00000561954 ZYXQ15942 572 aaKnown RBP16.51■□□□□ 0.23
IFT140-205ENST00000561954 CLEC10AQ8IUN9 316 aa16.51■□□□□ 0.23
IFT140-205ENST00000561954 FAM43AQ8N2R8 423 aa16.51■□□□□ 0.23
IFT140-205ENST00000561954 ACER1Q8TDN7 264 aa16.51■□□□□ 0.23
IFT140-205ENST00000561954 PTPN18Q99952 460 aa16.51■□□□□ 0.23
IFT140-205ENST00000561954 ZFYVE28Q9HCC9 887 aa16.51■□□□□ 0.23
IFT140-205ENST00000561954 TCP11L1Q9NUJ3 509 aa16.51■□□□□ 0.23
IFT140-205ENST00000561954 STX8Q9UNK0 236 aa16.51■□□□□ 0.23
IFT140-205ENST00000561954 SLC27A2O14975 620 aa16.5■□□□□ 0.23
IFT140-205ENST00000561954 KDM4AO75164 1064 aa16.5■□□□□ 0.23
IFT140-205ENST00000561954 TRPA1O75762 1119 aa16.5■□□□□ 0.23
IFT140-205ENST00000561954 VCAM1P19320 739 aa16.5■□□□□ 0.23
IFT140-205ENST00000561954 MCCP23508 829 aa16.5■□□□□ 0.23
IFT140-205ENST00000561954 CTCFP49711 727 aaPredicted RBP16.5■□□□□ 0.23
IFT140-205ENST00000561954 CREB3L3Q68CJ9 461 aa16.5■□□□□ 0.23
IFT140-205ENST00000561954 NCOA7Q8NI08 942 aa16.5■□□□□ 0.23
IFT140-205ENST00000561954 VCPKMTQ9H867 229 aa16.5■□□□□ 0.23
IFT140-205ENST00000561954 A0A1W2PRG0 241 aa16.49■□□□□ 0.23
IFT140-205ENST00000561954 B4E1Z4 1266 aa16.49■□□□□ 0.23
IFT140-205ENST00000561954 E7EWF7 191 aa16.49■□□□□ 0.23
IFT140-205ENST00000561954 WDR46O15213 610 aaKnown RBP16.49■□□□□ 0.23
IFT140-205ENST00000561954 OSBPP22059 807 aa16.49■□□□□ 0.23
IFT140-205ENST00000561954 IRX3P78415 501 aaPredicted RBP16.49■□□□□ 0.23
IFT140-205ENST00000561954 KRT32Q14532 448 aa16.49■□□□□ 0.23
IFT140-205ENST00000561954 SART3Q15020 963 aaKnown RBP16.49■□□□□ 0.23
IFT140-205ENST00000561954 NECTIN1Q15223 517 aa16.49■□□□□ 0.23
IFT140-205ENST00000561954 NOM1Q5C9Z4 860 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms