RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, human

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNSTRN-215	ENST00000561367	IREB2	P48200	963 aa	Known RBP	11.76	□□□□□ -0.53
KNSTRN-215	ENST00000561367	GABPA	Q06546	454 aa		11.76	□□□□□ -0.53
KNSTRN-215	ENST00000561367	PDE4B	Q07343	736 aa		11.76	□□□□□ -0.53
KNSTRN-215	ENST00000561367	PPARA	Q07869	468 aa		11.76	□□□□□ -0.53
KNSTRN-215	ENST00000561367	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.76	□□□□□ -0.53
KNSTRN-215	ENST00000561367	SH3BP5L	Q7L8J4	393 aa		11.76	□□□□□ -0.53
KNSTRN-215	ENST00000561367	ZFPM1	Q8IX07	1006 aa		11.76	□□□□□ -0.53
KNSTRN-215	ENST00000561367	C2orf69	Q8N8R5	385 aa		11.76	□□□□□ -0.53
KNSTRN-215	ENST00000561367	KCNV2	Q8TDN2	545 aa		11.76	□□□□□ -0.53
KNSTRN-215	ENST00000561367	CCDC17	Q96LX7	622 aa		11.76	□□□□□ -0.53
KNSTRN-215	ENST00000561367	LSG1	Q9H089	658 aa	Known RBP	11.76	□□□□□ -0.53
KNSTRN-215	ENST00000561367	HCST	Q9UBK5	93 aa		11.76	□□□□□ -0.53
KNSTRN-215	ENST00000561367	SAP30BP	Q9UHR5	308 aa	Known RBP	11.76	□□□□□ -0.53
KNSTRN-215	ENST00000561367	MCC	P23508	829 aa		11.75	□□□□□ -0.53
KNSTRN-215	ENST00000561367	PLCD1	P51178	756 aa		11.75	□□□□□ -0.53
KNSTRN-215	ENST00000561367	TATDN1	Q6P1N9	297 aa		11.75	□□□□□ -0.53
KNSTRN-215	ENST00000561367	C16orf86	Q6ZW13	317 aa		11.75	□□□□□ -0.53
KNSTRN-215	ENST00000561367	IL25	Q9H293	177 aa		11.75	□□□□□ -0.53
KNSTRN-215	ENST00000561367	CNNM2	Q9H8M5	875 aa		11.75	□□□□□ -0.53
KNSTRN-215	ENST00000561367	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
KNSTRN-215	ENST00000561367	ZNF112	Q9UJU3	913 aa		11.75	□□□□□ -0.53
KNSTRN-215	ENST00000561367	PAPPA2	Q9BXP8	1791 aa		11.74	□□□□□ -0.53
KNSTRN-215	ENST00000561367	GRXCR2	A6NFK2	248 aa		11.74	□□□□□ -0.53
KNSTRN-215	ENST00000561367	MINDY4B	A8MYZ0	360 aa		11.74	□□□□□ -0.53
KNSTRN-215	ENST00000561367	CTNND1	O60716	968 aa	Known RBP	11.74	□□□□□ -0.53
KNSTRN-215	ENST00000561367	CELF2	O95319	508 aa	Known RBP	11.74	□□□□□ -0.53
KNSTRN-215	ENST00000561367	FGR	P09769	529 aa		11.74	□□□□□ -0.53
KNSTRN-215	ENST00000561367	ZKSCAN1	P17029	563 aa	Predicted RBP	11.74	□□□□□ -0.53
KNSTRN-215	ENST00000561367	PTH1R	Q03431	593 aa		11.74	□□□□□ -0.53
KNSTRN-215	ENST00000561367	NECTIN1	Q15223	517 aa		11.74	□□□□□ -0.53
KNSTRN-215	ENST00000561367	C8orf34	Q49A92	452 aa		11.74	□□□□□ -0.53
KNSTRN-215	ENST00000561367	ANKRD13A	Q8IZ07	590 aa		11.74	□□□□□ -0.53
KNSTRN-215	ENST00000561367	KLRG1	Q96E93	195 aa		11.74	□□□□□ -0.53
KNSTRN-215	ENST00000561367	HHIPL1	Q96JK4	782 aa		11.74	□□□□□ -0.53
KNSTRN-215	ENST00000561367	TBC1D2	Q9BYX2	928 aa		11.74	□□□□□ -0.53
KNSTRN-215	ENST00000561367	UPF2	Q9HAU5	1272 aa	Known RBP	11.74	□□□□□ -0.53
KNSTRN-215	ENST00000561367	GBA2	Q9HCG7	927 aa	Predicted RBP	11.74	□□□□□ -0.53
KNSTRN-215	ENST00000561367	RABGEF1	Q9UJ41	708 aa		11.74	□□□□□ -0.53
KNSTRN-215	ENST00000561367	RBM8A	Q9Y5S9	174 aa	Known RBP	11.74	□□□□□ -0.53
KNSTRN-215	ENST00000561367	MYH1	P12882	1939 aa		11.74	□□□□□ -0.53
KNSTRN-215	ENST00000561367	SSC5D	A1L4H1	1573 aa		11.73	□□□□□ -0.53
KNSTRN-215	ENST00000561367	TMEM88B	A6NKF7	163 aa		11.73	□□□□□ -0.53
KNSTRN-215	ENST00000561367	TRAF5	O00463	557 aa		11.73	□□□□□ -0.53
KNSTRN-215	ENST00000561367	MAP3K7	O43318	606 aa		11.73	□□□□□ -0.53
KNSTRN-215	ENST00000561367	ORC4	O43929	436 aa		11.73	□□□□□ -0.53
KNSTRN-215	ENST00000561367	ASNS	P08243	561 aa		11.73	□□□□□ -0.53
KNSTRN-215	ENST00000561367	PLCB2	Q00722	1185 aa		11.73	□□□□□ -0.53
KNSTRN-215	ENST00000561367	KRT32	Q14532	448 aa		11.73	□□□□□ -0.53
KNSTRN-215	ENST00000561367	TSGA10IP	Q3SY00	556 aa		11.73	□□□□□ -0.53
KNSTRN-215	ENST00000561367	NOL9	Q5SY16	702 aa	Known RBP	11.73	□□□□□ -0.53
KNSTRN-215	ENST00000561367	AKNAD1	Q5T1N1	836 aa		11.73	□□□□□ -0.53
KNSTRN-215	ENST00000561367	MFSD6	Q6ZSS7	791 aa		11.73	□□□□□ -0.53
KNSTRN-215	ENST00000561367	IL27	Q8NEV9	243 aa		11.73	□□□□□ -0.53
KNSTRN-215	ENST00000561367	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
KNSTRN-215	ENST00000561367	STAG1	Q8WVM7	1258 aa		11.73	□□□□□ -0.53
KNSTRN-215	ENST00000561367	MKNK2	Q9HBH9	465 aa		11.73	□□□□□ -0.53
KNSTRN-215	ENST00000561367	CSAD	Q9Y600	493 aa		11.73	□□□□□ -0.53
KNSTRN-215	ENST00000561367	LAMB1	P07942	1786 aa		11.72	□□□□□ -0.53
KNSTRN-215	ENST00000561367	PHF20L1	A8MW92	1017 aa		11.72	□□□□□ -0.53
KNSTRN-215	ENST00000561367	USP2	O75604	605 aa	Predicted RBP	11.72	□□□□□ -0.53
KNSTRN-215	ENST00000561367	OSBP	P22059	807 aa		11.72	□□□□□ -0.53
KNSTRN-215	ENST00000561367	CAP2	P40123	477 aa		11.72	□□□□□ -0.53
KNSTRN-215	ENST00000561367	CDK8	P49336	464 aa		11.72	□□□□□ -0.53
KNSTRN-215	ENST00000561367	APLP1	P51693	650 aa		11.72	□□□□□ -0.53
KNSTRN-215	ENST00000561367	TRDN	Q13061	729 aa		11.72	□□□□□ -0.53
KNSTRN-215	ENST00000561367	TTLL12	Q14166	644 aa	Predicted RBP	11.72	□□□□□ -0.53
KNSTRN-215	ENST00000561367	LDLRAD1	Q5T700	205 aa		11.72	□□□□□ -0.53
KNSTRN-215	ENST00000561367	PRAMEF18	Q5VWM3	479 aa		11.72	□□□□□ -0.53
KNSTRN-215	ENST00000561367	CST9	Q5W186	159 aa		11.72	□□□□□ -0.53
KNSTRN-215	ENST00000561367	MIGA2	Q7L4E1	593 aa		11.72	□□□□□ -0.53
KNSTRN-215	ENST00000561367	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.72	□□□□□ -0.53
KNSTRN-215	ENST00000561367	WRNIP1	Q96S55	665 aa		11.72	□□□□□ -0.53
KNSTRN-215	ENST00000561367	USP26	Q9BXU7	913 aa		11.72	□□□□□ -0.53
KNSTRN-215	ENST00000561367	KRT23	Q9C075	422 aa		11.72	□□□□□ -0.53
KNSTRN-215	ENST00000561367	KIAA1468	Q9P260	1216 aa		11.72	□□□□□ -0.53
KNSTRN-215	ENST00000561367	ANGEL1	Q9UNK9	670 aa	Known RBP	11.72	□□□□□ -0.53
KNSTRN-215	ENST00000561367	SCAF8	Q9UPN6	1271 aa	Known RBP	11.72	□□□□□ -0.53
KNSTRN-215	ENST00000561367	POLR2A	P24928	1970 aa	Known RBP	11.72	□□□□□ -0.53
KNSTRN-215	ENST00000561367	CYP21A2	P08686	494 aa		11.71	□□□□□ -0.53
KNSTRN-215	ENST00000561367	CYP2D6	P10635	497 aa		11.71	□□□□□ -0.53
KNSTRN-215	ENST00000561367	SHMT1	P34896	483 aa		11.71	□□□□□ -0.53
KNSTRN-215	ENST00000561367	HSPA4	P34932	840 aa		11.71	□□□□□ -0.53
KNSTRN-215	ENST00000561367	ANAPC15	P60006	121 aa		11.71	□□□□□ -0.53
KNSTRN-215	ENST00000561367	CERKL	Q49MI3	558 aa	Predicted RBP	11.71	□□□□□ -0.53
KNSTRN-215	ENST00000561367	CCDC178	Q5BJE1	867 aa		11.71	□□□□□ -0.53
KNSTRN-215	ENST00000561367	THSD4	Q6ZMP0	1018 aa		11.71	□□□□□ -0.53
KNSTRN-215	ENST00000561367	SCYL3	Q8IZE3	742 aa		11.71	□□□□□ -0.53
KNSTRN-215	ENST00000561367	ESR2	Q92731	530 aa		11.71	□□□□□ -0.53
KNSTRN-215	ENST00000561367	KCNB2	Q92953	911 aa		11.71	□□□□□ -0.53
KNSTRN-215	ENST00000561367	MTA3	Q9BTC8	594 aa		11.71	□□□□□ -0.53
KNSTRN-215	ENST00000561367	DNAJC18	Q9H819	358 aa		11.71	□□□□□ -0.53
KNSTRN-215	ENST00000561367	ZNF408	Q9H9D4	720 aa		11.71	□□□□□ -0.53
KNSTRN-215	ENST00000561367	CABP5	Q9NP86	173 aa		11.71	□□□□□ -0.53
KNSTRN-215	ENST00000561367	PICK1	Q9NRD5	415 aa		11.71	□□□□□ -0.53
KNSTRN-215	ENST00000561367	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
KNSTRN-215	ENST00000561367	TRPM7	Q96QT4	1865 aa		11.71	□□□□□ -0.53
KNSTRN-215	ENST00000561367	PLIN4	Q96Q06	1357 aa		11.7	□□□□□ -0.54
KNSTRN-215	ENST00000561367	LAMA4	Q16363	1823 aa		11.7	□□□□□ -0.54
KNSTRN-215	ENST00000561367	CYP2D7	A0A087X1C5	515 aa		11.7	□□□□□ -0.54
KNSTRN-215	ENST00000561367	SLC27A2	O14975	620 aa		11.7	□□□□□ -0.54

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