RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ANKRD13DQ6ZTN6 518 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 MAATS1Q7Z4T9 603 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 STRA8Q7Z7C7 330 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 CATIPQ7Z7H3 387 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 DDX53Q86TM3 631 aaKnown RBP2.48□□□□□ -2.01
RTF1-207ENST00000561076 SULF2Q8IWU5 870 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 TRIM22Q8IYM9 498 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 CNPY4Q8N129 248 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 ZNF687Q8N1G0 1237 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 SPATA5Q8NB90 893 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 LRRN4CLQ8ND94 238 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 BTN2A2Q8WVV5 523 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 TMEM40Q8WWA1 233 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 SKA1Q96BD8 255 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 ELMO3Q96BJ8 720 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 TIFAQ96CG3 184 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 WNK4Q96J92 1243 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 MPP4Q96JB8 637 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 DHRS1Q96LJ7 313 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 MAGEB10Q96LZ2 347 aaPredicted RBP2.48□□□□□ -2.01
RTF1-207ENST00000561076 AGBL1Q96MI9 1066 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 STRBPQ96SI9 672 aaKnown RBP2.48□□□□□ -2.01
RTF1-207ENST00000561076 ZKSCAN3Q9BRR0 538 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 RTFDC1Q9BY42 306 aaPredicted RBP2.48□□□□□ -2.01
RTF1-207ENST00000561076 GBP3Q9H0R5 595 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 IGFLR1Q9H665 355 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 CNNM2Q9H8M5 875 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 FAM204AQ9H8W3 233 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 EHMT1Q9H9B1 1298 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 ENAMQ9NRM1 1142 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 TOMM22Q9NS69 142 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 DZANK1Q9NVP4 752 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 MKS1Q9NXB0 559 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 GMIPQ9P107 970 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 ZNF69Q9UC07 566 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 KLHL3Q9UH77 587 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 NOL7Q9UMY1 257 aaKnown RBP2.48□□□□□ -2.01
RTF1-207ENST00000561076 PCDHB10Q9UN67 800 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 KCNH4Q9UQ05 1017 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 DMTF1Q9Y222 760 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 LRCH1Q9Y2L9 728 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 PPP2R3BQ9Y5P8 575 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 SLC4A7Q9Y6M7 1214 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 RPS6KL1Q9Y6S9 549 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 PHLDB1Q86UU1 1377 aa2.48□□□□□ -2.01
RTF1-207ENST00000561076 FAM221AA4D161 298 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 CFAP69A5D8W1 941 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 ANKRD34BA5PLL1 514 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 FIBPO43427 364 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 XPOTO43592 962 aaKnown RBP2.47□□□□□ -2.01
RTF1-207ENST00000561076 CTNND1O60716 968 aaKnown RBP2.47□□□□□ -2.01
RTF1-207ENST00000561076 NBNO60934 754 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 ULK1O75385 1050 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 PAGE1O75459 146 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 SMNDC1O75940 238 aaKnown RBP eCLIP2.47□□□□□ -2.01
RTF1-207ENST00000561076 ATE1O95260 518 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 MT-CO1P00395 513 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 EGFRP00533 1210 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 SETSIPP0DME0 302 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 PLCG1P19174 1290 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 SDSP20132 328 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 POU3F3P20264 500 aaPredicted RBP2.47□□□□□ -2.01
RTF1-207ENST00000561076 ITPKAP23677 461 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 ARNTP27540 789 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 MAPK9P45984 424 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 HTR3AP46098 478 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 KCNJ6P48051 423 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 GRIA4P48058 902 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 IREB2P48200 963 aaKnown RBP2.47□□□□□ -2.01
RTF1-207ENST00000561076 VEGFBP49765 207 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 ZNF143P52747 638 aaPredicted RBP2.47□□□□□ -2.01
RTF1-207ENST00000561076 CABP4P57796 275 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 GABREP78334 506 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 PLAURQ03405 335 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 DDX10Q13206 875 aaKnown RBP2.47□□□□□ -2.01
RTF1-207ENST00000561076 GRB10Q13322 594 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 NNTQ13423 1086 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 GTF2H3Q13889 308 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 ACAP2Q15057 778 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 ABCB5Q2M3G0 1257 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 SPRED3Q2MJR0 410 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 ATP13A4Q4VNC1 1196 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 IFIT1BQ5T764 474 aaKnown RBP2.47□□□□□ -2.01
RTF1-207ENST00000561076 PIK3R6Q5UE93 754 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 PEAR1Q5VY43 1037 aaPredicted RBP2.47□□□□□ -2.01
RTF1-207ENST00000561076 JAKMIP3Q5VZ66 844 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 MRM1Q6IN84 353 aaKnown RBP2.47□□□□□ -2.01
RTF1-207ENST00000561076 POMZP3Q6PJE2 187 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 RSRC2Q7L4I2 434 aaKnown RBP2.47□□□□□ -2.01
RTF1-207ENST00000561076 NLRC3Q7RTR2 1065 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 HDXQ7Z353 690 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 SRLQ86TD4 932 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 TPH2Q8IWU9 490 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 PHACTR4Q8IZ21 702 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 MPNDQ8N594 471 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 OR13H1Q8NG92 308 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 PARD3BQ8TEW8 1205 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 USP33Q8TEY7 942 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 COG1Q8WTW3 980 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 PLD4Q96BZ4 506 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms