RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 SYCE3A1L190 88 aa14.95□□□□□ -0.02
SNX1-211ENST00000560829 GOLGA6L4A6NEF3 574 aa14.95□□□□□ -0.02
SNX1-211ENST00000560829 AKAP17AQ02040 695 aaKnown RBP14.95□□□□□ -0.02
SNX1-211ENST00000560829 PKN1Q16512 942 aa14.95□□□□□ -0.02
SNX1-211ENST00000560829 CCDC82Q8N4S0 544 aa14.95□□□□□ -0.02
SNX1-211ENST00000560829 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.95□□□□□ -0.02
SNX1-211ENST00000560829 FTOQ9C0B1 505 aaKnown RBP eCLIP14.95□□□□□ -0.02
SNX1-211ENST00000560829 SERPINB13Q9UIV8 391 aa14.95□□□□□ -0.02
SNX1-211ENST00000560829 CNTNAP5Q8WYK1 1306 aa14.95□□□□□ -0.02
SNX1-211ENST00000560829 XRCC6P12956 609 aaKnown RBP eCLIP14.94□□□□□ -0.02
SNX1-211ENST00000560829 NFIAQ12857 509 aa14.94□□□□□ -0.02
SNX1-211ENST00000560829 GRM4Q14833 912 aa14.94□□□□□ -0.02
SNX1-211ENST00000560829 SRBD1Q8N5C6 995 aaKnown RBP14.94□□□□□ -0.02
SNX1-211ENST00000560829 LINC00301Q8NCQ3 95 aa14.94□□□□□ -0.02
SNX1-211ENST00000560829 TMEM47Q9BQJ4 181 aa14.94□□□□□ -0.02
SNX1-211ENST00000560829 FOXP1Q9H334 677 aaPredicted RBP14.94□□□□□ -0.02
SNX1-211ENST00000560829 TCHHQ07283 1943 aa14.93□□□□□ -0.02
SNX1-211ENST00000560829 HLA-DOAP06340 250 aa14.93□□□□□ -0.02
SNX1-211ENST00000560829 VIL1P09327 827 aaKnown RBP14.93□□□□□ -0.02
SNX1-211ENST00000560829 XBP1P17861 261 aa14.93□□□□□ -0.02
SNX1-211ENST00000560829 GNAQP50148 359 aa14.93□□□□□ -0.02
SNX1-211ENST00000560829 SAFBQ15424 915 aaKnown RBP eCLIP14.93□□□□□ -0.02
SNX1-211ENST00000560829 RSBN1LQ6PCB5 846 aaPredicted RBP14.93□□□□□ -0.02
SNX1-211ENST00000560829 LARGE2Q8N3Y3 721 aa14.93□□□□□ -0.02
SNX1-211ENST00000560829 SGIP1Q9BQI5 828 aa14.93□□□□□ -0.02
SNX1-211ENST00000560829 DHX36Q9H2U1 1008 aaKnown RBP14.93□□□□□ -0.02
SNX1-211ENST00000560829 ATF5Q9Y2D1 282 aaPredicted RBP14.93□□□□□ -0.02
SNX1-211ENST00000560829 IGKV6D-41A0A0C4DH26 115 aa14.93□□□□□ -0.02
SNX1-211ENST00000560829 LIG1P18858 919 aa14.93□□□□□ -0.02
SNX1-211ENST00000560829 CEBPZQ03701 1054 aaKnown RBP14.93□□□□□ -0.02
SNX1-211ENST00000560829 NOSTRINQ8IVI9 506 aa14.93□□□□□ -0.02
SNX1-211ENST00000560829 DIS3L2Q8IYB7 885 aaKnown RBP14.93□□□□□ -0.02
SNX1-211ENST00000560829 KCNG4Q8TDN1 519 aa14.93□□□□□ -0.02
SNX1-211ENST00000560829 GMLQ99445 158 aa14.93□□□□□ -0.02
SNX1-211ENST00000560829 ZNF277Q9NRM2 450 aaPredicted RBP14.93□□□□□ -0.02
SNX1-211ENST00000560829 STX8Q9UNK0 236 aa14.93□□□□□ -0.02
SNX1-211ENST00000560829 V9GY48 417 aaPredicted RBP14.93□□□□□ -0.02
SNX1-211ENST00000560829 DALRD3Q5D0E6 543 aaKnown RBP14.92□□□□□ -0.02
SNX1-211ENST00000560829 ANO1Q5XXA6 986 aa14.92□□□□□ -0.02
SNX1-211ENST00000560829 PHF20Q9BVI0 1012 aa14.92□□□□□ -0.02
SNX1-211ENST00000560829 DDX19AQ9NUU7 478 aaKnown RBP14.92□□□□□ -0.02
SNX1-211ENST00000560829 FAM198AQ9UFP1 575 aa14.92□□□□□ -0.02
SNX1-211ENST00000560829 PCDHAC2Q9Y5I4 1007 aa14.92□□□□□ -0.02
SNX1-211ENST00000560829 CLIC4Q9Y696 253 aa14.92□□□□□ -0.02
SNX1-211ENST00000560829 COL4A5P29400 1685 aa14.92□□□□□ -0.02
SNX1-211ENST00000560829 ADAMTSL1Q8N6G6 1762 aa14.92□□□□□ -0.02
SNX1-211ENST00000560829 COL2A1P02458 1487 aaPredicted RBP14.91□□□□□ -0.02
SNX1-211ENST00000560829 TOP1P11387 765 aaKnown RBP14.91□□□□□ -0.02
SNX1-211ENST00000560829 SHMT1P34896 483 aa14.91□□□□□ -0.02
SNX1-211ENST00000560829 RBM5P52756 815 aaKnown RBP eCLIP14.91□□□□□ -0.02
SNX1-211ENST00000560829 GNL2Q13823 731 aaKnown RBP14.91□□□□□ -0.02
SNX1-211ENST00000560829 ECM29Q5VYK3 1845 aa14.91□□□□□ -0.02
SNX1-211ENST00000560829 SHISA4Q96DD7 197 aa14.91□□□□□ -0.02
SNX1-211ENST00000560829 CEP95Q96GE4 821 aa14.91□□□□□ -0.02
SNX1-211ENST00000560829 MAD2L2Q9UI95 211 aa14.91□□□□□ -0.02
SNX1-211ENST00000560829 KCNJ14Q9UNX9 436 aa14.91□□□□□ -0.02
SNX1-211ENST00000560829 CD2APQ9Y5K6 639 aa14.91□□□□□ -0.02
SNX1-211ENST00000560829 A0A1W2PQ27 194 aa14.91□□□□□ -0.02
SNX1-211ENST00000560829 A0A1W2PQ64 194 aa14.91□□□□□ -0.02
SNX1-211ENST00000560829 A0A1W2PQD8 194 aa14.91□□□□□ -0.02
SNX1-211ENST00000560829 PALM3A6NDB9 673 aaPredicted RBP14.91□□□□□ -0.02
SNX1-211ENST00000560829 BTBD18B2RXH4 712 aa14.91□□□□□ -0.02
SNX1-211ENST00000560829 ENTPD3O75355 529 aa14.91□□□□□ -0.02
SNX1-211ENST00000560829 R3HDM1Q15032 1099 aaKnown RBP14.91□□□□□ -0.02
SNX1-211ENST00000560829 PFKFB3Q16875 520 aaPredicted RBP14.91□□□□□ -0.02
SNX1-211ENST00000560829 CFAP100Q494V2 611 aa14.91□□□□□ -0.02
SNX1-211ENST00000560829 ADALQ6DHV7 355 aa14.91□□□□□ -0.02
SNX1-211ENST00000560829 METTL16Q86W50 562 aaKnown RBP14.91□□□□□ -0.02
SNX1-211ENST00000560829 BICD2Q8TD16 824 aa14.91□□□□□ -0.02
SNX1-211ENST00000560829 LZTS2Q9BRK4 669 aa14.91□□□□□ -0.02
SNX1-211ENST00000560829 MTMR4Q9NYA4 1195 aa14.91□□□□□ -0.02
SNX1-211ENST00000560829 ZNRF3Q9ULT6 936 aa14.91□□□□□ -0.02
SNX1-211ENST00000560829 ATRNL1Q5VV63 1379 aa14.9□□□□□ -0.02
SNX1-211ENST00000560829 MYH1P12882 1939 aa14.9□□□□□ -0.02
SNX1-211ENST00000560829 MYH15Q9Y2K3 1946 aa14.9□□□□□ -0.02
SNX1-211ENST00000560829 PSMD14O00487 310 aa14.9□□□□□ -0.02
SNX1-211ENST00000560829 SPTLC2O15270 562 aa14.9□□□□□ -0.02
SNX1-211ENST00000560829 AKR1B1P15121 316 aa14.9□□□□□ -0.02
SNX1-211ENST00000560829 SLC39A14Q15043 492 aa14.9□□□□□ -0.02
SNX1-211ENST00000560829 STK38Q15208 465 aa14.9□□□□□ -0.02
SNX1-211ENST00000560829 ZFPM1Q8IX07 1006 aa14.9□□□□□ -0.02
SNX1-211ENST00000560829 CCDC17Q96LX7 622 aa14.9□□□□□ -0.02
SNX1-211ENST00000560829 DACT1Q9NYF0 836 aa14.9□□□□□ -0.02
SNX1-211ENST00000560829 PCDHA7Q9UN72 937 aa14.9□□□□□ -0.02
SNX1-211ENST00000560829 SCG2P13521 617 aa14.89□□□□□ -0.03
SNX1-211ENST00000560829 SMARCA1P28370 1054 aa14.89□□□□□ -0.03
SNX1-211ENST00000560829 ME1P48163 572 aa14.89□□□□□ -0.03
SNX1-211ENST00000560829 PTPAQ15257 358 aa14.89□□□□□ -0.03
SNX1-211ENST00000560829 RILPL1Q5EBL4 403 aa14.89□□□□□ -0.03
SNX1-211ENST00000560829 SH3BP5LQ7L8J4 393 aa14.89□□□□□ -0.03
SNX1-211ENST00000560829 NIM1KQ8IY84 436 aa14.89□□□□□ -0.03
SNX1-211ENST00000560829 FAM177A1Q8N128 213 aaPredicted RBP14.89□□□□□ -0.03
SNX1-211ENST00000560829 VPS54Q9P1Q0 977 aa14.89□□□□□ -0.03
SNX1-211ENST00000560829 PI4KBQ9UBF8 816 aa14.89□□□□□ -0.03
SNX1-211ENST00000560829 PSME4Q14997 1843 aa14.89□□□□□ -0.03
SNX1-211ENST00000560829 SPDYE2BA6NHP3 402 aa14.89□□□□□ -0.03
SNX1-211ENST00000560829 PPP6R2O75170 966 aa14.89□□□□□ -0.03
SNX1-211ENST00000560829 RAD17O75943 681 aa14.89□□□□□ -0.03
SNX1-211ENST00000560829 SPDYE6P0CI01 402 aa14.89□□□□□ -0.03
SNX1-211ENST00000560829 CACNB3P54284 484 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 264.8 ms