RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 USP17L24Q0WX57 530 aa24.27■■□□□ 1.48
RABGGTA-214ENST00000560163 TATDN1Q6P1N9 297 aa24.27■■□□□ 1.48
RABGGTA-214ENST00000560163 LBX2Q6XYB7 198 aa24.27■■□□□ 1.48
RABGGTA-214ENST00000560163 CATSPERGQ6ZRH7 1159 aa24.27■■□□□ 1.48
RABGGTA-214ENST00000560163 TRIM34Q9BYJ4 488 aa24.27■■□□□ 1.48
RABGGTA-214ENST00000560163 NDUFB9Q9Y6M9 179 aa24.27■■□□□ 1.48
RABGGTA-214ENST00000560163 MYO5AQ9Y4I1 1855 aaKnown RBP24.26■■□□□ 1.47
RABGGTA-214ENST00000560163 PNMA6EA0A0J9YXQ4 647 aa24.26■■□□□ 1.47
RABGGTA-214ENST00000560163 DNM1LO00429 736 aa24.26■■□□□ 1.47
RABGGTA-214ENST00000560163 GH2P01242 217 aa24.26■■□□□ 1.47
RABGGTA-214ENST00000560163 ATN1P54259 1190 aaPredicted RBP24.26■■□□□ 1.47
RABGGTA-214ENST00000560163 TRPV1Q8NER1 839 aa24.26■■□□□ 1.47
RABGGTA-214ENST00000560163 NPLOC4Q8TAT6 608 aa24.26■■□□□ 1.47
RABGGTA-214ENST00000560163 SAP30BPQ9UHR5 308 aaKnown RBP24.26■■□□□ 1.47
RABGGTA-214ENST00000560163 IGSF3O75054 1194 aa24.25■■□□□ 1.47
RABGGTA-214ENST00000560163 G3BP1Q13283 466 aaKnown RBP eCLIP24.25■■□□□ 1.47
RABGGTA-214ENST00000560163 GRB14Q14449 540 aa24.25■■□□□ 1.47
RABGGTA-214ENST00000560163 ZNF697Q5TEC3 545 aa24.25■■□□□ 1.47
RABGGTA-214ENST00000560163 CDX2Q99626 313 aaPredicted RBP24.25■■□□□ 1.47
RABGGTA-214ENST00000560163 BTBD7Q9P203 1132 aa24.25■■□□□ 1.47
RABGGTA-214ENST00000560163 RLFQ13129 1914 aa24.25■■□□□ 1.47
RABGGTA-214ENST00000560163 HLA-DOAP06340 250 aa24.24■■□□□ 1.47
RABGGTA-214ENST00000560163 RARSP54136 660 aaKnown RBP24.24■■□□□ 1.47
RABGGTA-214ENST00000560163 RTP1P59025 263 aa24.24■■□□□ 1.47
RABGGTA-214ENST00000560163 KIAA1683Q9H0B3 1180 aa24.24■■□□□ 1.47
RABGGTA-214ENST00000560163 CWC22Q9HCG8 908 aaKnown RBP24.24■■□□□ 1.47
RABGGTA-214ENST00000560163 GPR108Q9NPR9 543 aa24.24■■□□□ 1.47
RABGGTA-214ENST00000560163 CYP2C19P33261 490 aa24.23■■□□□ 1.47
RABGGTA-214ENST00000560163 DYNLL1P63167 89 aaKnown RBP24.23■■□□□ 1.47
RABGGTA-214ENST00000560163 ATP2B2Q01814 1243 aa24.23■■□□□ 1.47
RABGGTA-214ENST00000560163 SHHQ15465 462 aa24.23■■□□□ 1.47
RABGGTA-214ENST00000560163 ATF7IPQ6VMQ6 1270 aa24.23■■□□□ 1.47
RABGGTA-214ENST00000560163 ZNF512BQ96KM6 892 aaPredicted RBP24.23■■□□□ 1.47
RABGGTA-214ENST00000560163 SEMA6BQ9H3T3 888 aa24.23■■□□□ 1.47
RABGGTA-214ENST00000560163 MUC3AQ02505 3323 aa24.23■■□□□ 1.47
RABGGTA-214ENST00000560163 CYBAP13498 195 aa24.22■■□□□ 1.47
RABGGTA-214ENST00000560163 VCAM1P19320 739 aa24.22■■□□□ 1.47
RABGGTA-214ENST00000560163 CNGA1P29973 690 aa24.22■■□□□ 1.47
RABGGTA-214ENST00000560163 ZYXQ15942 572 aaKnown RBP24.22■■□□□ 1.47
RABGGTA-214ENST00000560163 TTC39AQ5SRH9 613 aa24.22■■□□□ 1.47
RABGGTA-214ENST00000560163 DBNDD2Q9BQY9 259 aa24.22■■□□□ 1.47
RABGGTA-214ENST00000560163 GNAI2P04899 355 aa24.21■■□□□ 1.47
RABGGTA-214ENST00000560163 USP14P54578 494 aa24.21■■□□□ 1.47
RABGGTA-214ENST00000560163 TNNI3KQ59H18 835 aa24.21■■□□□ 1.47
RABGGTA-214ENST00000560163 C9orf50Q5SZB4 431 aa24.21■■□□□ 1.47
RABGGTA-214ENST00000560163 WDR78Q5VTH9 848 aa24.21■■□□□ 1.47
RABGGTA-214ENST00000560163 SLC39A5Q6ZMH5 540 aa24.21■■□□□ 1.47
RABGGTA-214ENST00000560163 ACER1Q8TDN7 264 aa24.21■■□□□ 1.47
RABGGTA-214ENST00000560163 PIH1D3Q9NQM4 214 aaKnown RBP24.21■■□□□ 1.47
RABGGTA-214ENST00000560163 PRKAG2Q9UGJ0 569 aa24.21■■□□□ 1.47
RABGGTA-214ENST00000560163 FPGT-TNNI3KV9GXZ4 949 aa24.21■■□□□ 1.47
RABGGTA-214ENST00000560163 MYH1P12882 1939 aa24.21■■□□□ 1.47
RABGGTA-214ENST00000560163 ZNF316A6NFI3 1004 aaPredicted RBP24.2■■□□□ 1.46
RABGGTA-214ENST00000560163 SPDYE16A6NNV3 312 aaPredicted RBP24.2■■□□□ 1.46
RABGGTA-214ENST00000560163 ZAP70P43403 619 aa24.2■■□□□ 1.46
RABGGTA-214ENST00000560163 CCDC158Q5M9N0 1113 aa24.2■■□□□ 1.46
RABGGTA-214ENST00000560163 GJC2Q5T442 439 aaPredicted RBP24.2■■□□□ 1.46
RABGGTA-214ENST00000560163 EHD4Q9H223 541 aa24.2■■□□□ 1.46
RABGGTA-214ENST00000560163 IVNS1ABPQ9Y6Y0 642 aa24.2■■□□□ 1.46
RABGGTA-214ENST00000560163 SNX17Q15036 470 aa24.19■■□□□ 1.46
RABGGTA-214ENST00000560163 ARRDC4Q8NCT1 418 aa24.19■■□□□ 1.46
RABGGTA-214ENST00000560163 FEZ1Q99689 392 aa24.19■■□□□ 1.46
RABGGTA-214ENST00000560163 TTYH1Q9H313 450 aaPredicted RBP24.19■■□□□ 1.46
RABGGTA-214ENST00000560163 SERPINB13Q9UIV8 391 aa24.19■■□□□ 1.46
RABGGTA-214ENST00000560163 ATP11BQ9Y2G3 1177 aa24.19■■□□□ 1.46
RABGGTA-214ENST00000560163 OLFML2BQ68BL8 750 aa24.18■■□□□ 1.46
RABGGTA-214ENST00000560163 MAFAQ8NHW3 353 aaPredicted RBP24.18■■□□□ 1.46
RABGGTA-214ENST00000560163 ZNF236Q9UL36 1845 aa24.17■■□□□ 1.46
RABGGTA-214ENST00000560163 CYP7A1P22680 504 aa24.17■■□□□ 1.46
RABGGTA-214ENST00000560163 GUCY1A2P33402 732 aa24.17■■□□□ 1.46
RABGGTA-214ENST00000560163 SMAD3P84022 425 aaKnown RBP24.17■■□□□ 1.46
RABGGTA-214ENST00000560163 POLA2Q14181 598 aa24.17■■□□□ 1.46
RABGGTA-214ENST00000560163 RAB3GAP1Q15042 981 aa24.17■■□□□ 1.46
RABGGTA-214ENST00000560163 CERKLQ49MI3 558 aaPredicted RBP24.17■■□□□ 1.46
RABGGTA-214ENST00000560163 BADQ92934 168 aa24.17■■□□□ 1.46
RABGGTA-214ENST00000560163 STRNO43815 780 aa24.16■■□□□ 1.46
RABGGTA-214ENST00000560163 TRIM27P14373 513 aa24.16■■□□□ 1.46
RABGGTA-214ENST00000560163 ABCB5Q2M3G0 1257 aa24.16■■□□□ 1.46
RABGGTA-214ENST00000560163 MOV10L1Q9BXT6 1211 aaKnown RBP24.16■■□□□ 1.46
RABGGTA-214ENST00000560163 RPAP3Q9H6T3 665 aaPredicted RBP24.16■■□□□ 1.46
RABGGTA-214ENST00000560163 TNNQ9UQP3 1299 aa24.16■■□□□ 1.46
RABGGTA-214ENST00000560163 SEPT4O43236 478 aa24.15■■□□□ 1.46
RABGGTA-214ENST00000560163 ADORA2AP29274 412 aa24.15■■□□□ 1.46
RABGGTA-214ENST00000560163 SHMT1P34896 483 aa24.15■■□□□ 1.46
RABGGTA-214ENST00000560163 C1orf53Q5VUE5 145 aa24.15■■□□□ 1.46
RABGGTA-214ENST00000560163 DPP9Q86TI2 863 aa24.15■■□□□ 1.46
RABGGTA-214ENST00000560163 MIGA1Q8NAN2 632 aa24.15■■□□□ 1.46
RABGGTA-214ENST00000560163 MYLIPQ8WY64 445 aa24.15■■□□□ 1.46
RABGGTA-214ENST00000560163 PDLIM7Q9NR12 457 aa24.15■■□□□ 1.46
RABGGTA-214ENST00000560163 TRIM43BA6NCK2 446 aa24.14■■□□□ 1.45
RABGGTA-214ENST00000560163 COBLO75128 1261 aa24.14■■□□□ 1.45
RABGGTA-214ENST00000560163 TRIM60Q495X7 471 aa24.14■■□□□ 1.45
RABGGTA-214ENST00000560163 SH3RF1Q7Z6J0 888 aa24.14■■□□□ 1.45
RABGGTA-214ENST00000560163 CERS3Q8IU89 383 aa24.14■■□□□ 1.45
RABGGTA-214ENST00000560163 SSH3Q8TE77 659 aa24.14■■□□□ 1.45
RABGGTA-214ENST00000560163 TRIM43Q96BQ3 446 aaPredicted RBP24.14■■□□□ 1.45
RABGGTA-214ENST00000560163 PRDM6Q9NQX0 595 aa24.14■■□□□ 1.45
RABGGTA-214ENST00000560163 KBTBD13C9JR72 458 aa24.13■■□□□ 1.45
RABGGTA-214ENST00000560163 USP5P45974 858 aa24.13■■□□□ 1.45
RABGGTA-214ENST00000560163 PLCD1P51178 756 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms