RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 BLOC1S2Q6QNY1 142 aa11.08□□□□□ -0.64
HERC1-206ENST00000559996 SULF1Q8IWU6 871 aa11.08□□□□□ -0.64
HERC1-206ENST00000559996 ANKS1AQ92625 1134 aa11.08□□□□□ -0.64
HERC1-206ENST00000559996 KLRG1Q96E93 195 aa11.08□□□□□ -0.64
HERC1-206ENST00000559996 CDCA5Q96FF9 252 aa11.08□□□□□ -0.64
HERC1-206ENST00000559996 LRRC2Q9BYS8 371 aa11.08□□□□□ -0.64
HERC1-206ENST00000559996 WDR19Q8NEZ3 1342 aa11.08□□□□□ -0.64
HERC1-206ENST00000559996 PLIN4Q96Q06 1357 aa11.07□□□□□ -0.64
HERC1-206ENST00000559996 PRC1O43663 620 aa11.07□□□□□ -0.64
HERC1-206ENST00000559996 RANBP6O60518 1105 aaKnown RBP11.07□□□□□ -0.64
HERC1-206ENST00000559996 SLC3A2P08195 630 aaKnown RBP11.07□□□□□ -0.64
HERC1-206ENST00000559996 HMGB1P09429 215 aaKnown RBP11.07□□□□□ -0.64
HERC1-206ENST00000559996 INPP5BP32019 993 aa11.07□□□□□ -0.64
HERC1-206ENST00000559996 MCM5P33992 734 aa11.07□□□□□ -0.64
HERC1-206ENST00000559996 CAP2P40123 477 aa11.07□□□□□ -0.64
HERC1-206ENST00000559996 EVCP57679 992 aa11.07□□□□□ -0.64
HERC1-206ENST00000559996 GSE1Q14687 1217 aa11.07□□□□□ -0.64
HERC1-206ENST00000559996 CERKLQ49MI3 558 aaPredicted RBP11.07□□□□□ -0.64
HERC1-206ENST00000559996 CST9Q5W186 159 aa11.07□□□□□ -0.64
HERC1-206ENST00000559996 Q6ZUG5 572 aa11.07□□□□□ -0.64
HERC1-206ENST00000559996 AMOTL1Q8IY63 956 aa11.07□□□□□ -0.64
HERC1-206ENST00000559996 ZNF444Q8N0Y2 327 aaPredicted RBP11.07□□□□□ -0.64
HERC1-206ENST00000559996 ESR2Q92731 530 aa11.07□□□□□ -0.64
HERC1-206ENST00000559996 CCDC17Q96LX7 622 aa11.07□□□□□ -0.64
HERC1-206ENST00000559996 ZKSCAN3Q9BRR0 538 aa11.07□□□□□ -0.64
HERC1-206ENST00000559996 MTA3Q9BTC8 594 aa11.07□□□□□ -0.64
HERC1-206ENST00000559996 MKNK2Q9HBH9 465 aa11.07□□□□□ -0.64
HERC1-206ENST00000559996 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.07□□□□□ -0.64
HERC1-206ENST00000559996 CYP46A1Q9Y6A2 500 aa11.07□□□□□ -0.64
HERC1-206ENST00000559996 PAPPA2Q9BXP8 1791 aa11.06□□□□□ -0.64
HERC1-206ENST00000559996 SH2B2O14492 632 aaPredicted RBP11.06□□□□□ -0.64
HERC1-206ENST00000559996 GDF11O95390 407 aa11.06□□□□□ -0.64
HERC1-206ENST00000559996 NT5C2P49902 561 aa11.06□□□□□ -0.64
HERC1-206ENST00000559996 AK2P54819 239 aa11.06□□□□□ -0.64
HERC1-206ENST00000559996 TRDNQ13061 729 aa11.06□□□□□ -0.64
HERC1-206ENST00000559996 SUPT20HL1Q3ZLR7 823 aa11.06□□□□□ -0.64
HERC1-206ENST00000559996 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.06□□□□□ -0.64
HERC1-206ENST00000559996 MOB2Q70IA6 237 aa11.06□□□□□ -0.64
HERC1-206ENST00000559996 CRACR2BQ8N4Y2 399 aaPredicted RBP11.06□□□□□ -0.64
HERC1-206ENST00000559996 ENAHQ8N8S7 591 aaPredicted RBP11.06□□□□□ -0.64
HERC1-206ENST00000559996 ZNF784Q8NCA9 323 aaPredicted RBP11.06□□□□□ -0.64
HERC1-206ENST00000559996 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.06□□□□□ -0.64
HERC1-206ENST00000559996 SNX21Q969T3 373 aa11.06□□□□□ -0.64
HERC1-206ENST00000559996 ZSCAN10Q96SZ4 725 aaPredicted RBP11.06□□□□□ -0.64
HERC1-206ENST00000559996 LARP6Q9BRS8 491 aaKnown RBP11.06□□□□□ -0.64
HERC1-206ENST00000559996 LY9Q9HBG7 655 aa11.06□□□□□ -0.64
HERC1-206ENST00000559996 GPBP1L1Q9HC44 474 aaPredicted RBP11.06□□□□□ -0.64
HERC1-206ENST00000559996 PDRG1Q9NUG6 133 aa11.06□□□□□ -0.64
HERC1-206ENST00000559996 MTMR4Q9NYA4 1195 aa11.06□□□□□ -0.64
HERC1-206ENST00000559996 BRPF3Q9ULD4 1205 aa11.06□□□□□ -0.64
HERC1-206ENST00000559996 PASKQ96RG2 1323 aa11.06□□□□□ -0.64
HERC1-206ENST00000559996 TSPY2A6NKD2 308 aa11.05□□□□□ -0.64
HERC1-206ENST00000559996 CTNND1O60716 968 aaKnown RBP11.05□□□□□ -0.64
HERC1-206ENST00000559996 GH2P01242 217 aa11.05□□□□□ -0.64
HERC1-206ENST00000559996 YY1P25490 414 aa11.05□□□□□ -0.64
HERC1-206ENST00000559996 LIFRP42702 1097 aa11.05□□□□□ -0.64
HERC1-206ENST00000559996 ST3GAL1Q11201 340 aa11.05□□□□□ -0.64
HERC1-206ENST00000559996 SEPT2Q15019 361 aa11.05□□□□□ -0.64
HERC1-206ENST00000559996 ABCB5Q2M3G0 1257 aa11.05□□□□□ -0.64
HERC1-206ENST00000559996 LDLRAD1Q5T700 205 aa11.05□□□□□ -0.64
HERC1-206ENST00000559996 RALYLQ86SE5 291 aaKnown RBP11.05□□□□□ -0.64
HERC1-206ENST00000559996 SGMS1Q86VZ5 419 aa11.05□□□□□ -0.64
HERC1-206ENST00000559996 DGKHQ86XP1 1220 aa11.05□□□□□ -0.64
HERC1-206ENST00000559996 CLEC10AQ8IUN9 316 aa11.05□□□□□ -0.64
HERC1-206ENST00000559996 ZKSCAN4Q969J2 545 aaPredicted RBP11.05□□□□□ -0.64
HERC1-206ENST00000559996 MKL1Q969V6 931 aa11.05□□□□□ -0.64
HERC1-206ENST00000559996 CEP95Q96GE4 821 aa11.05□□□□□ -0.64
HERC1-206ENST00000559996 TMEM87BQ96K49 555 aa11.05□□□□□ -0.64
HERC1-206ENST00000559996 ZNF341Q9BYN7 854 aa11.05□□□□□ -0.64
HERC1-206ENST00000559996 OCEL1Q9H607 264 aa11.05□□□□□ -0.64
HERC1-206ENST00000559996 ZNF287Q9HBT7 754 aa11.05□□□□□ -0.64
HERC1-206ENST00000559996 TOMM22Q9NS69 142 aa11.05□□□□□ -0.64
HERC1-206ENST00000559996 TPCN1Q9ULQ1 816 aa11.05□□□□□ -0.64
HERC1-206ENST00000559996 A0A1W2PRG0 241 aa11.04□□□□□ -0.64
HERC1-206ENST00000559996 LARGE1O95461 756 aa11.04□□□□□ -0.64
HERC1-206ENST00000559996 TSPY3P0CV98 308 aa11.04□□□□□ -0.64
HERC1-206ENST00000559996 TSPY8P0CW00 308 aa11.04□□□□□ -0.64
HERC1-206ENST00000559996 PRKG1Q13976 671 aa11.04□□□□□ -0.64
HERC1-206ENST00000559996 NOL9Q5SY16 702 aaKnown RBP11.04□□□□□ -0.64
HERC1-206ENST00000559996 DCAF15Q66K64 600 aa11.04□□□□□ -0.64
HERC1-206ENST00000559996 CCDC84Q86UT8 332 aaPredicted RBP11.04□□□□□ -0.64
HERC1-206ENST00000559996 IL27Q8NEV9 243 aa11.04□□□□□ -0.64
HERC1-206ENST00000559996 BRF1Q92994 677 aa11.04□□□□□ -0.64
HERC1-206ENST00000559996 FAM217BQ9NTX9 383 aaPredicted RBP11.04□□□□□ -0.64
HERC1-206ENST00000559996 HPS5Q9UPZ3 1129 aa11.04□□□□□ -0.64
HERC1-206ENST00000559996 TNKSO95271 1327 aa11.04□□□□□ -0.64
HERC1-206ENST00000559996 MYH8P13535 1937 aa11.03□□□□□ -0.64
HERC1-206ENST00000559996 IFIT3O14879 490 aaKnown RBP11.03□□□□□ -0.64
HERC1-206ENST00000559996 MAP3K9P80192 1104 aa11.03□□□□□ -0.64
HERC1-206ENST00000559996 APOBRQ0VD83 1088 aa11.03□□□□□ -0.64
HERC1-206ENST00000559996 ME3Q16798 604 aa11.03□□□□□ -0.64
HERC1-206ENST00000559996 KIAA1755Q5JYT7 1200 aa11.03□□□□□ -0.64
HERC1-206ENST00000559996 TMEM179Q6ZVK1 233 aa11.03□□□□□ -0.64
HERC1-206ENST00000559996 TMEM47Q9BQJ4 181 aa11.03□□□□□ -0.64
HERC1-206ENST00000559996 TBC1D2Q9BYX2 928 aa11.03□□□□□ -0.64
HERC1-206ENST00000559996 NYAP2Q9P242 653 aa11.03□□□□□ -0.64
HERC1-206ENST00000559996 ZBTB21Q9ULJ3 1066 aa11.03□□□□□ -0.64
HERC1-206ENST00000559996 ANGEL1Q9UNK9 670 aaKnown RBP11.03□□□□□ -0.64
HERC1-206ENST00000559996 SNCAIPQ9Y6H5 919 aa11.03□□□□□ -0.64
HERC1-206ENST00000559996 PHIPQ8WWQ0 1821 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms