RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 SLC9C2Q5TAH2 1124 aa22.83■■□□□ 1.25
CDC42BPB-206ENST00000559790 TRIM34Q9BYJ4 488 aa22.83■■□□□ 1.25
CDC42BPB-206ENST00000559790 PLXNA1Q9UIW2 1896 aa22.83■■□□□ 1.24
CDC42BPB-206ENST00000559790 MAGEB6P1A0A0J9YX57 407 aa22.82■■□□□ 1.24
CDC42BPB-206ENST00000559790 CYP2D6P10635 497 aa22.82■■□□□ 1.24
CDC42BPB-206ENST00000559790 VCAM1P19320 739 aa22.82■■□□□ 1.24
CDC42BPB-206ENST00000559790 ERVK-9P63128 1117 aa22.82■■□□□ 1.24
CDC42BPB-206ENST00000559790 ERVK-24P63145 666 aa22.82■■□□□ 1.24
CDC42BPB-206ENST00000559790 USP17L2Q6R6M4 530 aa22.82■■□□□ 1.24
CDC42BPB-206ENST00000559790 CLASRPQ8N2M8 674 aaKnown RBP22.82■■□□□ 1.24
CDC42BPB-206ENST00000559790 SLC44A5Q8NCS7 719 aa22.82■■□□□ 1.24
CDC42BPB-206ENST00000559790 SDR42E1Q8WUS8 393 aa22.82■■□□□ 1.24
CDC42BPB-206ENST00000559790 KIAA1683Q9H0B3 1180 aa22.82■■□□□ 1.24
CDC42BPB-206ENST00000559790 RCAN3Q9UKA8 241 aa22.82■■□□□ 1.24
CDC42BPB-206ENST00000559790 MYH4Q9Y623 1939 aa22.82■■□□□ 1.24
CDC42BPB-206ENST00000559790 TTF1Q15361 905 aaPredicted RBP22.81■■□□□ 1.24
CDC42BPB-206ENST00000559790 ZYXQ15942 572 aaKnown RBP22.81■■□□□ 1.24
CDC42BPB-206ENST00000559790 MORN1Q5T089 497 aa22.81■■□□□ 1.24
CDC42BPB-206ENST00000559790 DNAJC2Q99543 621 aaKnown RBP22.81■■□□□ 1.24
CDC42BPB-206ENST00000559790 DCP1AQ9NPI6 582 aaPredicted RBP22.81■■□□□ 1.24
CDC42BPB-206ENST00000559790 A0A1W2PRG0 241 aa22.8■■□□□ 1.24
CDC42BPB-206ENST00000559790 MS4A1P11836 297 aa22.8■■□□□ 1.24
CDC42BPB-206ENST00000559790 ADD2P35612 726 aa22.8■■□□□ 1.24
CDC42BPB-206ENST00000559790 ABCB5Q2M3G0 1257 aa22.8■■□□□ 1.24
CDC42BPB-206ENST00000559790 CERKLQ49MI3 558 aaPredicted RBP22.8■■□□□ 1.24
CDC42BPB-206ENST00000559790 CHRDL2Q6WN34 429 aa22.8■■□□□ 1.24
CDC42BPB-206ENST00000559790 TTC6Q86TZ1 520 aa22.8■■□□□ 1.24
CDC42BPB-206ENST00000559790 GPRC5AQ8NFJ5 357 aa22.8■■□□□ 1.24
CDC42BPB-206ENST00000559790 PRKAB2O43741 272 aa22.79■■□□□ 1.24
CDC42BPB-206ENST00000559790 SEPT2Q15019 361 aa22.79■■□□□ 1.24
CDC42BPB-206ENST00000559790 CCL14Q16627 93 aa22.79■■□□□ 1.24
CDC42BPB-206ENST00000559790 KIAA1755Q5JYT7 1200 aa22.79■■□□□ 1.24
CDC42BPB-206ENST00000559790 GPR142Q7Z601 462 aa22.79■■□□□ 1.24
CDC42BPB-206ENST00000559790 ARMT1Q9H993 441 aa22.79■■□□□ 1.24
CDC42BPB-206ENST00000559790 RBM27Q9P2N5 1060 aaKnown RBP22.79■■□□□ 1.24
CDC42BPB-206ENST00000559790 RAB11FIP3O75154 756 aa22.78■■□□□ 1.24
CDC42BPB-206ENST00000559790 HMMRO75330 724 aa22.78■■□□□ 1.24
CDC42BPB-206ENST00000559790 XRCC5P13010 732 aaKnown RBP22.78■■□□□ 1.24
CDC42BPB-206ENST00000559790 ATP5JP18859 108 aa22.78■■□□□ 1.24
CDC42BPB-206ENST00000559790 CYP2B6P20813 491 aa22.78■■□□□ 1.24
CDC42BPB-206ENST00000559790 RAB3GAP1Q15042 981 aa22.78■■□□□ 1.24
CDC42BPB-206ENST00000559790 LBX2Q6XYB7 198 aa22.78■■□□□ 1.24
CDC42BPB-206ENST00000559790 CLEC10AQ8IUN9 316 aa22.78■■□□□ 1.24
CDC42BPB-206ENST00000559790 PAWRQ96IZ0 340 aaKnown RBP22.78■■□□□ 1.24
CDC42BPB-206ENST00000559790 PAGR1Q9BTK6 254 aa22.78■■□□□ 1.24
CDC42BPB-206ENST00000559790 CRNKL1Q9BZJ0 848 aaKnown RBP22.78■■□□□ 1.24
CDC42BPB-206ENST00000559790 PAG1Q9NWQ8 432 aa22.78■■□□□ 1.24
CDC42BPB-206ENST00000559790 BTBD7Q9P203 1132 aa22.78■■□□□ 1.24
CDC42BPB-206ENST00000559790 RPTORQ8N122 1335 aa22.78■■□□□ 1.24
CDC42BPB-206ENST00000559790 SPDYE16A6NNV3 312 aaPredicted RBP22.77■■□□□ 1.24
CDC42BPB-206ENST00000559790 IFIT2P09913 472 aaKnown RBP22.77■■□□□ 1.24
CDC42BPB-206ENST00000559790 CATSPERGQ6ZRH7 1159 aa22.77■■□□□ 1.24
CDC42BPB-206ENST00000559790 SIAH1Q8IUQ4 282 aa22.77■■□□□ 1.24
CDC42BPB-206ENST00000559790 SOCS4Q8WXH5 440 aa22.77■■□□□ 1.24
CDC42BPB-206ENST00000559790 DPF3Q92784 378 aa22.77■■□□□ 1.24
CDC42BPB-206ENST00000559790 FEZ1Q99689 392 aa22.77■■□□□ 1.24
CDC42BPB-206ENST00000559790 HAUS7Q99871 368 aa22.77■■□□□ 1.24
CDC42BPB-206ENST00000559790 HTATIP2Q9BUP3 242 aa22.77■■□□□ 1.24
CDC42BPB-206ENST00000559790 BOLA2Q9H3K6 86 aa22.77■■□□□ 1.24
CDC42BPB-206ENST00000559790 MCM9Q9NXL9 1143 aa22.77■■□□□ 1.24
CDC42BPB-206ENST00000559790 LTBP2Q14767 1821 aa22.76■■□□□ 1.23
CDC42BPB-206ENST00000559790 IGHA2P01877 340 aa22.76■■□□□ 1.23
CDC42BPB-206ENST00000559790 MAPK4P31152 587 aa22.76■■□□□ 1.23
CDC42BPB-206ENST00000559790 DYNLL2Q96FJ2 89 aa22.76■■□□□ 1.23
CDC42BPB-206ENST00000559790 RABGAP1Q9Y3P9 1069 aa22.76■■□□□ 1.23
CDC42BPB-206ENST00000559790 SMCHD1A6NHR9 2005 aa22.75■■□□□ 1.23
CDC42BPB-206ENST00000559790 CYP2D7A0A087X1C5 515 aa22.75■■□□□ 1.23
CDC42BPB-206ENST00000559790 USP17L15C9J2P7 530 aa22.75■■□□□ 1.23
CDC42BPB-206ENST00000559790 USP17L13C9JLJ4 530 aa22.75■■□□□ 1.23
CDC42BPB-206ENST00000559790 USP17L11C9JVI0 530 aa22.75■■□□□ 1.23
CDC42BPB-206ENST00000559790 USP17L18D6R9N7 530 aa22.75■■□□□ 1.23
CDC42BPB-206ENST00000559790 USP17L22D6RA61 530 aa22.75■■□□□ 1.23
CDC42BPB-206ENST00000559790 USP17L17D6RBQ6 530 aa22.75■■□□□ 1.23
CDC42BPB-206ENST00000559790 USP17L19D6RCP7 530 aa22.75■■□□□ 1.23
CDC42BPB-206ENST00000559790 USP17L20D6RJB6 530 aa22.75■■□□□ 1.23
CDC42BPB-206ENST00000559790 SMARCA5O60264 1052 aaPredicted RBP22.75■■□□□ 1.23
CDC42BPB-206ENST00000559790 MBD4O95243 580 aa22.75■■□□□ 1.23
CDC42BPB-206ENST00000559790 TFRCP02786 760 aaKnown RBP22.75■■□□□ 1.23
CDC42BPB-206ENST00000559790 PRKAR2AP13861 404 aaKnown RBP22.75■■□□□ 1.23
CDC42BPB-206ENST00000559790 USP17L24Q0WX57 530 aa22.75■■□□□ 1.23
CDC42BPB-206ENST00000559790 GTF3C2Q8WUA4 911 aaPredicted RBP22.75■■□□□ 1.23
CDC42BPB-206ENST00000559790 NUDT12Q9BQG2 462 aa22.75■■□□□ 1.23
CDC42BPB-206ENST00000559790 FLRT1Q9NZU1 646 aa22.75■■□□□ 1.23
CDC42BPB-206ENST00000559790 OGDHLQ9ULD0 1010 aa22.75■■□□□ 1.23
CDC42BPB-206ENST00000559790 CACNB2Q08289 660 aaPredicted RBP22.74■■□□□ 1.23
CDC42BPB-206ENST00000559790 PDE3AQ14432 1141 aa22.74■■□□□ 1.23
CDC42BPB-206ENST00000559790 APBA2Q99767 749 aa22.74■■□□□ 1.23
CDC42BPB-206ENST00000559790 RPAP3Q9H6T3 665 aaPredicted RBP22.74■■□□□ 1.23
CDC42BPB-206ENST00000559790 HMX1Q9NP08 348 aaPredicted RBP22.74■■□□□ 1.23
CDC42BPB-206ENST00000559790 PFASO15067 1338 aa22.74■■□□□ 1.23
CDC42BPB-206ENST00000559790 POLR3DP05423 398 aaPredicted RBP22.73■■□□□ 1.23
CDC42BPB-206ENST00000559790 CAPN2P17655 700 aa22.73■■□□□ 1.23
CDC42BPB-206ENST00000559790 USP14P54578 494 aa22.73■■□□□ 1.23
CDC42BPB-206ENST00000559790 PLEKHH3Q7Z736 793 aa22.73■■□□□ 1.23
CDC42BPB-206ENST00000559790 ANKLE1Q8NAG6 615 aa22.73■■□□□ 1.23
CDC42BPB-206ENST00000559790 AKR1B1P15121 316 aa22.72■■□□□ 1.23
CDC42BPB-206ENST00000559790 CCND3P30281 292 aaPredicted RBP22.72■■□□□ 1.23
CDC42BPB-206ENST00000559790 LHX8Q68G74 356 aa22.72■■□□□ 1.23
CDC42BPB-206ENST00000559790 MCM3APO60318 1980 aa22.71■■□□□ 1.23
CDC42BPB-206ENST00000559790 MAP2K5Q13163 448 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms