RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 ZNF287Q9HBT7 754 aa16.71■□□□□ 0.27
RABGGTA-209ENST00000559551 EPS15P42566 896 aa16.7■□□□□ 0.26
RABGGTA-209ENST00000559551 MMP14P50281 582 aa16.7■□□□□ 0.26
RABGGTA-209ENST00000559551 TATDN1Q6P1N9 297 aa16.7■□□□□ 0.26
RABGGTA-209ENST00000559551 CMTR1Q8N1G2 835 aaKnown RBP16.7■□□□□ 0.26
RABGGTA-209ENST00000559551 FANCBQ8NB91 859 aa16.7■□□□□ 0.26
RABGGTA-209ENST00000559551 CSRNP1Q96S65 589 aa16.7■□□□□ 0.26
RABGGTA-209ENST00000559551 TMEM47Q9BQJ4 181 aa16.7■□□□□ 0.26
RABGGTA-209ENST00000559551 TMOD2Q9NZR1 351 aa16.7■□□□□ 0.26
RABGGTA-209ENST00000559551 ATAD5Q96QE3 1844 aa16.7■□□□□ 0.26
RABGGTA-209ENST00000559551 RCAN1P53805 252 aa16.69■□□□□ 0.26
RABGGTA-209ENST00000559551 HIRAP54198 1017 aaPredicted RBP16.69■□□□□ 0.26
RABGGTA-209ENST00000559551 KIF4BQ2VIQ3 1234 aa16.69■□□□□ 0.26
RABGGTA-209ENST00000559551 FAM83AQ86UY5 434 aa16.69■□□□□ 0.26
RABGGTA-209ENST00000559551 FOXP4Q8IVH2 680 aaPredicted RBP16.69■□□□□ 0.26
RABGGTA-209ENST00000559551 NUP133Q8WUM0 1156 aa16.69■□□□□ 0.26
RABGGTA-209ENST00000559551 PHKBQ93100 1093 aa16.69■□□□□ 0.26
RABGGTA-209ENST00000559551 FUT2Q10981 343 aa16.69■□□□□ 0.26
RABGGTA-209ENST00000559551 LARP1BQ659C4 914 aaKnown RBP16.69■□□□□ 0.26
RABGGTA-209ENST00000559551 CDC37L1Q7L3B6 337 aa16.69■□□□□ 0.26
RABGGTA-209ENST00000559551 NBPF11Q86T75 865 aa16.69■□□□□ 0.26
RABGGTA-209ENST00000559551 TEPSINQ96N21 525 aa16.69■□□□□ 0.26
RABGGTA-209ENST00000559551 GUCY1A2P33402 732 aa16.68■□□□□ 0.26
RABGGTA-209ENST00000559551 RTN1Q16799 776 aa16.68■□□□□ 0.26
RABGGTA-209ENST00000559551 AIFM3Q96NN9 605 aa16.68■□□□□ 0.26
RABGGTA-209ENST00000559551 GJB4Q9NTQ9 266 aa16.68■□□□□ 0.26
RABGGTA-209ENST00000559551 HACL1Q9UJ83 578 aa16.68■□□□□ 0.26
RABGGTA-209ENST00000559551 DDAH1O94760 285 aa16.68■□□□□ 0.26
RABGGTA-209ENST00000559551 PLEKHA8P1O95397 391 aa16.68■□□□□ 0.26
RABGGTA-209ENST00000559551 ZSCAN22P10073 491 aaPredicted RBP16.68■□□□□ 0.26
RABGGTA-209ENST00000559551 CLEC17AQ6ZS10 378 aa16.68■□□□□ 0.26
RABGGTA-209ENST00000559551 CRACR2BQ8N4Y2 399 aaPredicted RBP16.68■□□□□ 0.26
RABGGTA-209ENST00000559551 PNMA1Q8ND90 353 aa16.68■□□□□ 0.26
RABGGTA-209ENST00000559551 MTMR4Q9NYA4 1195 aa16.68■□□□□ 0.26
RABGGTA-209ENST00000559551 STX8Q9UNK0 236 aa16.68■□□□□ 0.26
RABGGTA-209ENST00000559551 MYO1BO43795 1136 aa16.67■□□□□ 0.26
RABGGTA-209ENST00000559551 IFNAR1P17181 557 aa16.67■□□□□ 0.26
RABGGTA-209ENST00000559551 HMGN5P82970 282 aaKnown RBP16.67■□□□□ 0.26
RABGGTA-209ENST00000559551 RASA3Q14644 834 aa16.67■□□□□ 0.26
RABGGTA-209ENST00000559551 GPR162Q16538 588 aa16.67■□□□□ 0.26
RABGGTA-209ENST00000559551 SLC35G1Q2M3R5 365 aa16.67■□□□□ 0.26
RABGGTA-209ENST00000559551 SYNE3Q6ZMZ3 975 aa16.67■□□□□ 0.26
RABGGTA-209ENST00000559551 CATIPQ7Z7H3 387 aa16.67■□□□□ 0.26
RABGGTA-209ENST00000559551 ORC3Q9UBD5 711 aaPredicted RBP16.67■□□□□ 0.26
RABGGTA-209ENST00000559551 WDR33Q9C0J8 1336 aaKnown RBP16.67■□□□□ 0.26
RABGGTA-209ENST00000559551 CPLX1O14810 134 aa16.66■□□□□ 0.26
RABGGTA-209ENST00000559551 DHX16O60231 1041 aaKnown RBP16.66■□□□□ 0.26
RABGGTA-209ENST00000559551 FOSBP53539 338 aa16.66■□□□□ 0.26
RABGGTA-209ENST00000559551 SIAH1Q8IUQ4 282 aa16.66■□□□□ 0.26
RABGGTA-209ENST00000559551 VPS37CA5D8V6 355 aaPredicted RBP16.66■□□□□ 0.26
RABGGTA-209ENST00000559551 GDF11O95390 407 aa16.66■□□□□ 0.26
RABGGTA-209ENST00000559551 BAG4O95429 457 aaKnown RBP16.66■□□□□ 0.26
RABGGTA-209ENST00000559551 STAG2Q8N3U4 1231 aa16.66■□□□□ 0.26
RABGGTA-209ENST00000559551 CHMP4CQ96CF2 233 aa16.66■□□□□ 0.26
RABGGTA-209ENST00000559551 KAT14Q9H8E8 782 aa16.66■□□□□ 0.26
RABGGTA-209ENST00000559551 H7C1D1 291 aa16.65■□□□□ 0.26
RABGGTA-209ENST00000559551 F13A1P00488 732 aa16.65■□□□□ 0.26
RABGGTA-209ENST00000559551 CERKLQ49MI3 558 aaPredicted RBP16.65■□□□□ 0.26
RABGGTA-209ENST00000559551 CCDC178Q5BJE1 867 aa16.65■□□□□ 0.26
RABGGTA-209ENST00000559551 OTUD7BQ6GQQ9 843 aa16.65■□□□□ 0.26
RABGGTA-209ENST00000559551 CCDC82Q8N4S0 544 aa16.65■□□□□ 0.26
RABGGTA-209ENST00000559551 SHISA4Q96DD7 197 aa16.65■□□□□ 0.26
RABGGTA-209ENST00000559551 FMNL1O95466 1100 aaPredicted RBP16.65■□□□□ 0.26
RABGGTA-209ENST00000559551 MAP3K10Q02779 954 aa16.65■□□□□ 0.26
RABGGTA-209ENST00000559551 TMTC3Q6ZXV5 915 aa16.65■□□□□ 0.26
RABGGTA-209ENST00000559551 MIGA2Q7L4E1 593 aa16.65■□□□□ 0.26
RABGGTA-209ENST00000559551 SRBD1Q8N5C6 995 aaKnown RBP16.65■□□□□ 0.26
RABGGTA-209ENST00000559551 FAM184AQ8NB25 1140 aa16.65■□□□□ 0.26
RABGGTA-209ENST00000559551 CCDC17Q96LX7 622 aa16.65■□□□□ 0.26
RABGGTA-209ENST00000559551 MAD2L2Q9UI95 211 aa16.65■□□□□ 0.26
RABGGTA-209ENST00000559551 HERC5Q9UII4 1024 aaKnown RBP16.65■□□□□ 0.26
RABGGTA-209ENST00000559551 MCM4P33991 863 aa16.64■□□□□ 0.25
RABGGTA-209ENST00000559551 GRM4Q14833 912 aa16.64■□□□□ 0.25
RABGGTA-209ENST00000559551 SEPT2Q15019 361 aa16.64■□□□□ 0.25
RABGGTA-209ENST00000559551 ANGEL2Q5VTE6 544 aaKnown RBP16.64■□□□□ 0.25
RABGGTA-209ENST00000559551 FERMT3Q86UX7 667 aa16.64■□□□□ 0.25
RABGGTA-209ENST00000559551 SLC26A6Q9BXS9 759 aa16.64■□□□□ 0.25
RABGGTA-209ENST00000559551 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.64■□□□□ 0.25
RABGGTA-209ENST00000559551 TAOK2Q9UL54 1235 aa16.64■□□□□ 0.25
RABGGTA-209ENST00000559551 CNTNAP5Q8WYK1 1306 aa16.64■□□□□ 0.25
RABGGTA-209ENST00000559551 MPHOSPH10O00566 681 aaKnown RBP16.63■□□□□ 0.25
RABGGTA-209ENST00000559551 CALM1P0DP23 149 aa16.63■□□□□ 0.25
RABGGTA-209ENST00000559551 CALM2P0DP24 149 aa16.63■□□□□ 0.25
RABGGTA-209ENST00000559551 CALM3P0DP25 149 aa16.63■□□□□ 0.25
RABGGTA-209ENST00000559551 TOP1P11387 765 aaKnown RBP16.63■□□□□ 0.25
RABGGTA-209ENST00000559551 PDCP20941 246 aa16.63■□□□□ 0.25
RABGGTA-209ENST00000559551 GUCY1B3Q02153 619 aa16.63■□□□□ 0.25
RABGGTA-209ENST00000559551 FOXD4L6Q3SYB3 417 aaPredicted RBP16.63■□□□□ 0.25
RABGGTA-209ENST00000559551 FOXD4L3Q6VB84 417 aaPredicted RBP16.63■□□□□ 0.25
RABGGTA-209ENST00000559551 LRRC47Q8N1G4 583 aaKnown RBP16.63■□□□□ 0.25
RABGGTA-209ENST00000559551 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.63■□□□□ 0.25
RABGGTA-209ENST00000559551 STK36Q9NRP7 1315 aa16.63■□□□□ 0.25
RABGGTA-209ENST00000559551 TBC1D12O60347 775 aa16.63■□□□□ 0.25
RABGGTA-209ENST00000559551 PKN1Q16512 942 aa16.63■□□□□ 0.25
RABGGTA-209ENST00000559551 DEFB129Q9H1M3 183 aa16.63■□□□□ 0.25
RABGGTA-209ENST00000559551 CLIP2Q9UDT6 1046 aa16.63■□□□□ 0.25
RABGGTA-209ENST00000559551 MTMR7Q9Y216 660 aa16.63■□□□□ 0.25
RABGGTA-209ENST00000559551 hCG_1642624A0A1W2PR95 340 aa16.62■□□□□ 0.25
RABGGTA-209ENST00000559551 CDKL5O76039 1030 aa16.62■□□□□ 0.25
RABGGTA-209ENST00000559551 RESTQ13127 1097 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms