RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 TMC4Q7Z404 712 aa12.45□□□□□ -0.42
CSPG4P5-201ENST00000558731 PSDA5PKW4 1024 aaPredicted RBP12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 NDUFA8P51970 172 aa12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 ZNF174Q15697 407 aa12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 LINC00301Q8NCQ3 95 aa12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 KCNG4Q8TDN1 519 aa12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 ANAPC4Q9UJX5 808 aa12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 ZBTB12Q9Y330 459 aaPredicted RBP12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 CICQ96RK0 1608 aaPredicted RBP12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 GOLGA6L19H0YKK7 550 aa12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 HLA-DOAP06340 250 aa12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 CCDC173Q0VFZ6 552 aa12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 PIK3AP1Q6ZUJ8 805 aa12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 NOSTRINQ8IVI9 506 aa12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 TDRD3Q9H7E2 651 aaKnown RBP12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 CLIP2Q9UDT6 1046 aa12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 CALM1P0DP23 149 aa12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 CALM2P0DP24 149 aa12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 CALM3P0DP25 149 aa12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 VEGFAP15692 232 aaPredicted RBP12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 CRKP46108 304 aa12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 NBPF11Q86T75 865 aa12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 SRBD1Q8N5C6 995 aaKnown RBP12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 JMYQ8N9B5 988 aa12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 CAMKK2Q96RR4 588 aa12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 RCOR1Q9UKL0 485 aa12.44□□□□□ -0.42
CSPG4P5-201ENST00000558731 GPR75-ASB3A0A0A6YYF3 556 aa12.43□□□□□ -0.42
CSPG4P5-201ENST00000558731 TCP10L2B9ZVM9 353 aa12.43□□□□□ -0.42
CSPG4P5-201ENST00000558731 TROAPQ12815 778 aa12.43□□□□□ -0.42
CSPG4P5-201ENST00000558731 CEP95Q96GE4 821 aa12.43□□□□□ -0.42
CSPG4P5-201ENST00000558731 DDX4Q9NQI0 724 aaKnown RBP12.43□□□□□ -0.42
CSPG4P5-201ENST00000558731 ELP1O95163 1332 aa12.43□□□□□ -0.42
CSPG4P5-201ENST00000558731 MMP1P03956 469 aa12.43□□□□□ -0.42
CSPG4P5-201ENST00000558731 DPEP1P16444 411 aa12.43□□□□□ -0.42
CSPG4P5-201ENST00000558731 TTLL6Q8N841 843 aa12.43□□□□□ -0.42
CSPG4P5-201ENST00000558731 UIMC1Q96RL1 719 aa12.43□□□□□ -0.42
CSPG4P5-201ENST00000558731 TMEM47Q9BQJ4 181 aa12.43□□□□□ -0.42
CSPG4P5-201ENST00000558731 TAF1LQ8IZX4 1826 aa12.43□□□□□ -0.42
CSPG4P5-201ENST00000558731 C4AP0C0L4 1744 aa12.43□□□□□ -0.42
CSPG4P5-201ENST00000558731 LAMA4Q16363 1823 aa12.43□□□□□ -0.42
CSPG4P5-201ENST00000558731 RASA1P20936 1047 aa12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 KRT2P35908 639 aa12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 NOM1Q5C9Z4 860 aaKnown RBP12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 IL17RBQ9NRM6 502 aa12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 RBM28Q9NW13 759 aaKnown RBP12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 PCDHB6Q9Y5E3 794 aa12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 MYH2Q9UKX2 1941 aa12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 RREB1Q92766 1687 aa12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 ORC4O43929 436 aa12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 MCM7P33993 719 aa12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 ZNF165P49910 485 aa12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 FBXL16Q8N461 479 aa12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 ZNF830Q96NB3 372 aaPredicted RBP12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 CLSTN2Q9H4D0 955 aa12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 BCS1LQ9Y276 419 aa12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 GDF11O95390 407 aa12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 SYKP43405 635 aa12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 FAM160A1Q05DH4 1040 aa12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 CDC42EP5Q6NZY7 148 aa12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 ZFPM1Q8IX07 1006 aa12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 RTEL1Q9NZ71 1219 aa12.42□□□□□ -0.42
CSPG4P5-201ENST00000558731 KLRF2D3W0D1 207 aa12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 AKR1B1P15121 316 aa12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 RHBDL3P58872 404 aa12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 R3HDM1Q15032 1099 aaKnown RBP12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 TMTC3Q6ZXV5 915 aa12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 PODNQ7Z5L7 613 aa12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 TRIM5Q9C035 493 aa12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 SERPINB13Q9UIV8 391 aa12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 ADCY5O95622 1261 aa12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 SBK1Q52WX2 424 aa12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 HSP90AA4PQ58FG1 418 aa12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 ZSCAN30Q86W11 494 aa12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 CREBRFQ8IUR6 639 aa12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 OGFOD1Q8N543 542 aa12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 RNF26Q9BY78 433 aaPredicted RBP12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 SEC63Q9UGP8 760 aaKnown RBP12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 WDHD1O75717 1129 aaPredicted RBP12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 DDAH1O94760 285 aa12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 PARP1P09874 1014 aaKnown RBP12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 PFKFB1P16118 471 aa12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 NAPAP54920 295 aa12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 PRDM10Q9NQV6 1147 aa12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 TMOD2Q9NZR1 351 aa12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 PDS5AQ29RF7 1337 aaKnown RBP12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 IRS2Q9Y4H2 1338 aa12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 LY75O60449 1722 aa12.41□□□□□ -0.42
CSPG4P5-201ENST00000558731 SLC16A2P36021 539 aa12.4□□□□□ -0.42
CSPG4P5-201ENST00000558731 PPP4CP60510 307 aa12.4□□□□□ -0.42
CSPG4P5-201ENST00000558731 NOL7Q9UMY1 257 aaKnown RBP12.4□□□□□ -0.42
CSPG4P5-201ENST00000558731 CCDC194A0A1B0GVG4 234 aa12.4□□□□□ -0.42
CSPG4P5-201ENST00000558731 ZNF202O95125 648 aa12.4□□□□□ -0.42
CSPG4P5-201ENST00000558731 PCP11498 1178 aaKnown RBP12.4□□□□□ -0.42
CSPG4P5-201ENST00000558731 SCG2P13521 617 aa12.4□□□□□ -0.42
CSPG4P5-201ENST00000558731 ZYXQ15942 572 aaKnown RBP12.4□□□□□ -0.42
CSPG4P5-201ENST00000558731 SOGA3Q5TF21 947 aa12.4□□□□□ -0.42
CSPG4P5-201ENST00000558731 CNNM3Q8NE01 707 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms