RNA–Protein interactions for RNA: ENST00000558339.1

SPG21-205, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-205ENST00000558339 KIAA1683Q9H0B3 1180 aa26.81■■□□□ 1.88
SPG21-205ENST00000558339 STAP2Q9UGK3 403 aa26.81■■□□□ 1.88
SPG21-205ENST00000558339 ZBED9Q6R2W3 1325 aa26.81■■□□□ 1.88
SPG21-205ENST00000558339 USP17L15C9J2P7 530 aa26.8■■□□□ 1.88
SPG21-205ENST00000558339 USP17L13C9JLJ4 530 aa26.8■■□□□ 1.88
SPG21-205ENST00000558339 USP17L11C9JVI0 530 aa26.8■■□□□ 1.88
SPG21-205ENST00000558339 USP17L18D6R9N7 530 aa26.8■■□□□ 1.88
SPG21-205ENST00000558339 USP17L22D6RA61 530 aa26.8■■□□□ 1.88
SPG21-205ENST00000558339 USP17L17D6RBQ6 530 aa26.8■■□□□ 1.88
SPG21-205ENST00000558339 USP17L19D6RCP7 530 aa26.8■■□□□ 1.88
SPG21-205ENST00000558339 USP17L20D6RJB6 530 aa26.8■■□□□ 1.88
SPG21-205ENST00000558339 CACNB2Q08289 660 aaPredicted RBP26.8■■□□□ 1.88
SPG21-205ENST00000558339 USP17L24Q0WX57 530 aa26.8■■□□□ 1.88
SPG21-205ENST00000558339 PDE3AQ14432 1141 aa26.8■■□□□ 1.88
SPG21-205ENST00000558339 ABCB5Q2M3G0 1257 aa26.8■■□□□ 1.88
SPG21-205ENST00000558339 PLEKHH3Q7Z736 793 aa26.8■■□□□ 1.88
SPG21-205ENST00000558339 NBPF3Q9H094 633 aa26.8■■□□□ 1.88
SPG21-205ENST00000558339 MAGEB6P1A0A0J9YX57 407 aa26.79■■□□□ 1.88
SPG21-205ENST00000558339 PDE6AP16499 860 aa26.79■■□□□ 1.88
SPG21-205ENST00000558339 ZKSCAN1P17029 563 aaPredicted RBP26.79■■□□□ 1.88
SPG21-205ENST00000558339 VCAM1P19320 739 aa26.79■■□□□ 1.88
SPG21-205ENST00000558339 GABPAQ06546 454 aa26.79■■□□□ 1.88
SPG21-205ENST00000558339 CATSPERGQ6ZRH7 1159 aa26.79■■□□□ 1.88
SPG21-205ENST00000558339 RABGAP1Q9Y3P9 1069 aa26.79■■□□□ 1.88
SPG21-205ENST00000558339 USP14P54578 494 aa26.78■■□□□ 1.88
SPG21-205ENST00000558339 HSP90AB4PQ58FF6 505 aa26.78■■□□□ 1.88
SPG21-205ENST00000558339 SIRT2Q8IXJ6 389 aa26.78■■□□□ 1.88
SPG21-205ENST00000558339 C7orf61Q8IZ16 206 aa26.78■■□□□ 1.88
SPG21-205ENST00000558339 C11orf49Q9H6J7 331 aa26.78■■□□□ 1.88
SPG21-205ENST00000558339 A0A1W2PPC1 479 aa26.77■■□□□ 1.88
SPG21-205ENST00000558339 TCRBV5S4A2TA0A5A2 114 aa26.77■■□□□ 1.88
SPG21-205ENST00000558339 SOX1O00570 391 aaPredicted RBP26.77■■□□□ 1.88
SPG21-205ENST00000558339 RGS2P41220 211 aa26.77■■□□□ 1.88
SPG21-205ENST00000558339 TTF1Q15361 905 aaPredicted RBP26.77■■□□□ 1.88
SPG21-205ENST00000558339 SLC9C2Q5TAH2 1124 aa26.77■■□□□ 1.88
SPG21-205ENST00000558339 CCAR1Q8IX12 1150 aaKnown RBP26.77■■□□□ 1.88
SPG21-205ENST00000558339 TRMT44Q8IYL2 757 aaKnown RBP26.77■■□□□ 1.88
SPG21-205ENST00000558339 PFASO15067 1338 aa26.76■■□□□ 1.87
SPG21-205ENST00000558339 ZNF532Q9HCE3 1301 aa26.76■■□□□ 1.87
SPG21-205ENST00000558339 APBB1O00213 710 aa26.76■■□□□ 1.87
SPG21-205ENST00000558339 POLR3DP05423 398 aaPredicted RBP26.76■■□□□ 1.87
SPG21-205ENST00000558339 CCND3P30281 292 aaPredicted RBP26.76■■□□□ 1.87
SPG21-205ENST00000558339 LHX8Q68G74 356 aa26.76■■□□□ 1.87
SPG21-205ENST00000558339 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.76■■□□□ 1.87
SPG21-205ENST00000558339 EDC3Q96F86 508 aaKnown RBP26.76■■□□□ 1.87
SPG21-205ENST00000558339 APBA2Q99767 749 aa26.76■■□□□ 1.87
SPG21-205ENST00000558339 GDF15Q99988 308 aa26.76■■□□□ 1.87
SPG21-205ENST00000558339 CABP5Q9NP86 173 aa26.76■■□□□ 1.87
SPG21-205ENST00000558339 BTBD7Q9P203 1132 aa26.76■■□□□ 1.87
SPG21-205ENST00000558339 ZMYND8Q9ULU4 1186 aaPredicted RBP26.76■■□□□ 1.87
SPG21-205ENST00000558339 GOLIM4O00461 696 aa26.75■■□□□ 1.87
SPG21-205ENST00000558339 MAP2K5Q13163 448 aa26.75■■□□□ 1.87
SPG21-205ENST00000558339 SEPT2Q15019 361 aa26.75■■□□□ 1.87
SPG21-205ENST00000558339 LBX2Q6XYB7 198 aa26.75■■□□□ 1.87
SPG21-205ENST00000558339 KIF1BPQ96EK5 621 aa26.75■■□□□ 1.87
SPG21-205ENST00000558339 CRNKL1Q9BZJ0 848 aaKnown RBP26.75■■□□□ 1.87
SPG21-205ENST00000558339 NAV1Q8NEY1 1877 aa26.74■■□□□ 1.87
SPG21-205ENST00000558339 RPAP2Q8IXW5 612 aaPredicted RBP26.74■■□□□ 1.87
SPG21-205ENST00000558339 CLASRPQ8N2M8 674 aaKnown RBP26.74■■□□□ 1.87
SPG21-205ENST00000558339 LCORLQ8N3X6 602 aa26.74■■□□□ 1.87
SPG21-205ENST00000558339 SDR42E1Q8WUS8 393 aa26.74■■□□□ 1.87
SPG21-205ENST00000558339 DNAJC2Q99543 621 aaKnown RBP26.74■■□□□ 1.87
SPG21-205ENST00000558339 RPAP3Q9H6T3 665 aaPredicted RBP26.74■■□□□ 1.87
SPG21-205ENST00000558339 MCM9Q9NXL9 1143 aa26.74■■□□□ 1.87
SPG21-205ENST00000558339 FLRT1Q9NZU1 646 aa26.74■■□□□ 1.87
SPG21-205ENST00000558339 A0A1W2PRG0 241 aa26.73■■□□□ 1.87
SPG21-205ENST00000558339 SPDYE16A6NNV3 312 aaPredicted RBP26.73■■□□□ 1.87
SPG21-205ENST00000558339 COL6A1P12109 1028 aa26.73■■□□□ 1.87
SPG21-205ENST00000558339 DIEXFQ68CQ4 756 aaKnown RBP26.73■■□□□ 1.87
SPG21-205ENST00000558339 DCP1AQ9NPI6 582 aaPredicted RBP26.73■■□□□ 1.87
SPG21-205ENST00000558339 ZBTB40Q9NUA8 1239 aa26.73■■□□□ 1.87
SPG21-205ENST00000558339 CYP2D6P10635 497 aa26.72■■□□□ 1.87
SPG21-205ENST00000558339 PTPREP23469 700 aa26.72■■□□□ 1.87
SPG21-205ENST00000558339 CCNA1P78396 465 aa26.72■■□□□ 1.87
SPG21-205ENST00000558339 SLFNL1Q499Z3 407 aa26.72■■□□□ 1.87
SPG21-205ENST00000558339 LRCH3Q96II8 777 aa26.72■■□□□ 1.87
SPG21-205ENST00000558339 COG6Q9Y2V7 657 aa26.72■■□□□ 1.87
SPG21-205ENST00000558339 SYN1P17600 705 aa26.71■■□□□ 1.87
SPG21-205ENST00000558339 BMP8BP34820 402 aa26.71■■□□□ 1.87
SPG21-205ENST00000558339 SLC44A5Q8NCS7 719 aa26.71■■□□□ 1.87
SPG21-205ENST00000558339 CWC22Q9HCG8 908 aaKnown RBP26.71■■□□□ 1.87
SPG21-205ENST00000558339 SLC15A5A6NIM6 579 aa26.7■■□□□ 1.86
SPG21-205ENST00000558339 IFIT2P09913 472 aaKnown RBP26.7■■□□□ 1.86
SPG21-205ENST00000558339 MS4A1P11836 297 aa26.7■■□□□ 1.86
SPG21-205ENST00000558339 WDR78Q5VTH9 848 aa26.7■■□□□ 1.86
SPG21-205ENST00000558339 ARMT1Q9H993 441 aa26.7■■□□□ 1.86
SPG21-205ENST00000558339 MPHOSPH10O00566 681 aaKnown RBP26.69■■□□□ 1.86
SPG21-205ENST00000558339 GRB14Q14449 540 aa26.69■■□□□ 1.86
SPG21-205ENST00000558339 KIAA1755Q5JYT7 1200 aa26.69■■□□□ 1.86
SPG21-205ENST00000558339 NPLOC4Q8TAT6 608 aa26.69■■□□□ 1.86
SPG21-205ENST00000558339 BCL11AQ9H165 835 aa26.69■■□□□ 1.86
SPG21-205ENST00000558339 DDX19BQ9UMR2 479 aa26.69■■□□□ 1.86
SPG21-205ENST00000558339 SMIM22K7EJ46 135 aa26.68■■□□□ 1.86
SPG21-205ENST00000558339 PRKAB2O43741 272 aa26.68■■□□□ 1.86
SPG21-205ENST00000558339 HMMRO75330 724 aa26.68■■□□□ 1.86
SPG21-205ENST00000558339 GLRX3O76003 335 aaKnown RBP26.68■■□□□ 1.86
SPG21-205ENST00000558339 HOXC6P09630 235 aa26.68■■□□□ 1.86
SPG21-205ENST00000558339 DYNLL2Q96FJ2 89 aa26.68■■□□□ 1.86
SPG21-205ENST00000558339 RAB11FIP3O75154 756 aa26.67■■□□□ 1.86
SPG21-205ENST00000558339 IGHA2P01877 340 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms