RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 SLIT3O75094 1523 aa11.82□□□□□ -0.52
SUPT16H-207ENST00000557394 TNS3Q68CZ2 1445 aa11.82□□□□□ -0.52
SUPT16H-207ENST00000557394 SHTN1A0MZ66 631 aa11.81□□□□□ -0.52
SUPT16H-207ENST00000557394 GNAT3A8MTJ3 354 aa11.81□□□□□ -0.52
SUPT16H-207ENST00000557394 TMCO5BA8MYB1 307 aa11.81□□□□□ -0.52
SUPT16H-207ENST00000557394 CAPN15O75808 1086 aa11.81□□□□□ -0.52
SUPT16H-207ENST00000557394 CDC27P30260 824 aa11.81□□□□□ -0.52
SUPT16H-207ENST00000557394 GGCXP38435 758 aa11.81□□□□□ -0.52
SUPT16H-207ENST00000557394 WLSQ5T9L3 541 aa11.81□□□□□ -0.52
SUPT16H-207ENST00000557394 SPATS2Q86XZ4 545 aaKnown RBP11.81□□□□□ -0.52
SUPT16H-207ENST00000557394 RIN2Q8WYP3 895 aaPredicted RBP11.81□□□□□ -0.52
SUPT16H-207ENST00000557394 PAGR1Q9BTK6 254 aa11.81□□□□□ -0.52
SUPT16H-207ENST00000557394 CAPS2Q9BXY5 557 aa11.81□□□□□ -0.52
SUPT16H-207ENST00000557394 CAPN7Q9Y6W3 813 aa11.81□□□□□ -0.52
SUPT16H-207ENST00000557394 A0A1B0GTH6 734 aa11.81□□□□□ -0.52
SUPT16H-207ENST00000557394 PPP6R2O75170 966 aa11.81□□□□□ -0.52
SUPT16H-207ENST00000557394 POLR3DP05423 398 aaPredicted RBP11.81□□□□□ -0.52
SUPT16H-207ENST00000557394 COPB2P35606 906 aa11.81□□□□□ -0.52
SUPT16H-207ENST00000557394 IL17REQ8NFR9 667 aa11.81□□□□□ -0.52
SUPT16H-207ENST00000557394 MYO6Q9UM54 1294 aa11.81□□□□□ -0.52
SUPT16H-207ENST00000557394 AHDC1Q5TGY3 1603 aaPredicted RBP11.81□□□□□ -0.52
SUPT16H-207ENST00000557394 SOS2Q07890 1332 aaPredicted RBP11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 HOXB7P09629 217 aa11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 NAT2P11245 290 aa11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 PBX1P40424 430 aa11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 SHC4Q6S5L8 630 aa11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 B4GALNT4Q76KP1 1039 aa11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 ZC3H15Q8WU90 426 aaKnown RBP11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 DDX17Q92841 729 aaKnown RBP11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 NFE2L3Q9Y4A8 694 aa11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 PCDHA5Q9Y5H7 936 aa11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 NFAT5O94916 1531 aa11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 A6NNZ2 444 aa11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 MYO1FO00160 1098 aa11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 ARHGAP25P42331 645 aa11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 MRPL12P52815 198 aaKnown RBP11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 SKOR1P84550 965 aa11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 SKIDA1Q1XH10 827 aa11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 TUBB8Q3ZCM7 444 aa11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 RESP18Q5W5W9 173 aa11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 SYNE3Q6ZMZ3 975 aa11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 YTHDF3Q7Z739 585 aaKnown RBP11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 TTC30AQ86WT1 665 aa11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 NUTM2AQ8IVF1 878 aaPredicted RBP11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 C8orf76Q96K31 380 aa11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 VEZTQ9HBM0 779 aa11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 COMMD10Q9Y6G5 202 aa11.8□□□□□ -0.52
SUPT16H-207ENST00000557394 SPATA31A3Q5VYP0 1347 aa11.79□□□□□ -0.52
SUPT16H-207ENST00000557394 LTN1O94822 1766 aa11.79□□□□□ -0.52
SUPT16H-207ENST00000557394 CFAP69A5D8W1 941 aa11.79□□□□□ -0.52
SUPT16H-207ENST00000557394 GCFC2P16383 781 aaKnown RBP11.79□□□□□ -0.52
SUPT16H-207ENST00000557394 FLT3P36888 993 aa11.79□□□□□ -0.52
SUPT16H-207ENST00000557394 MDM2Q00987 491 aaPredicted RBP11.79□□□□□ -0.52
SUPT16H-207ENST00000557394 KIF23Q02241 960 aaPredicted RBP11.79□□□□□ -0.52
SUPT16H-207ENST00000557394 FMR1Q06787 632 aaKnown RBP eCLIP11.79□□□□□ -0.521e-6■□□□□ 10
SUPT16H-207ENST00000557394 G3BP1Q13283 466 aaKnown RBP eCLIP11.79□□□□□ -0.521e-8■□□□□ 10.5
SUPT16H-207ENST00000557394 MCMDC2Q4G0Z9 681 aa11.79□□□□□ -0.52
SUPT16H-207ENST00000557394 OTUD7BQ6GQQ9 843 aa11.79□□□□□ -0.52
SUPT16H-207ENST00000557394 APTXQ7Z2E3 356 aaKnown RBP11.79□□□□□ -0.52
SUPT16H-207ENST00000557394 TRAPPC11Q7Z392 1133 aa11.79□□□□□ -0.52
SUPT16H-207ENST00000557394 CDC5LQ99459 802 aaKnown RBP11.79□□□□□ -0.52
SUPT16H-207ENST00000557394 EHD4Q9H223 541 aa11.79□□□□□ -0.52
SUPT16H-207ENST00000557394 PHRF1Q9P1Y6 1649 aaKnown RBP11.79□□□□□ -0.52
SUPT16H-207ENST00000557394 MAP3K15Q6ZN16 1313 aa11.79□□□□□ -0.52
SUPT16H-207ENST00000557394 SYNRGQ9UMZ2 1314 aa11.79□□□□□ -0.52
SUPT16H-207ENST00000557394 OVOS2A0A0G2JMS6 1433 aa11.79□□□□□ -0.52
SUPT16H-207ENST00000557394 KIF28PB7ZC32 967 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 MEFVO15553 781 aaPredicted RBP11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 TOM1O60784 492 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 MFAP3LO75121 409 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 ATP5JP18859 108 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 PPP2R5AQ15172 486 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 NT5DC1Q5TFE4 455 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 CCDC129Q6ZRS4 1044 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 JMYQ8N9B5 988 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 ANKRD24Q8TF21 1146 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 CCDC51Q96ER9 411 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 CCDC194A0A1B0GVG4 234 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 GNGT1P63211 74 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 RBL2Q08999 1139 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 PLCB4Q15147 1175 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 PTPAQ15257 358 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 NCAPH2Q6IBW4 605 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 TEX11Q8IYF3 940 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 OGFOD1Q8N543 542 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 MLKLQ8NB16 471 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 KCNH5Q8NCM2 988 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 EDC3Q96F86 508 aaKnown RBP11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 MED15Q96RN5 788 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 EYA1Q99502 592 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 CRACR2AQ9BSW2 395 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 CD248Q9HCU0 757 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 KIAA1522Q9P206 1035 aaPredicted RBP11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 FBXO9Q9UK97 447 aaPredicted RBP11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 MAN1B1Q9UKM7 699 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 UTYO14607 1347 aa11.78□□□□□ -0.52
SUPT16H-207ENST00000557394 GOLGA8KD6RF30 607 aa11.77□□□□□ -0.52
SUPT16H-207ENST00000557394 ZEB2O60315 1214 aa11.77□□□□□ -0.52
SUPT16H-207ENST00000557394 RASSF9O75901 435 aa11.77□□□□□ -0.52
SUPT16H-207ENST00000557394 RDXP35241 583 aaKnown RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms