RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 PGBD3Q8N328 593 aa7.73□□□□□ -1.17
FOXN3-215ENST00000557261 NGDNQ8NEJ9 315 aaKnown RBP7.73□□□□□ -1.17
FOXN3-215ENST00000557261 OR13H1Q8NG92 308 aa7.73□□□□□ -1.17
FOXN3-215ENST00000557261 JARID2Q92833 1246 aaPredicted RBP7.73□□□□□ -1.17
FOXN3-215ENST00000557261 PMEPA1Q969W9 287 aa7.73□□□□□ -1.17
FOXN3-215ENST00000557261 OSMRQ99650 979 aa7.73□□□□□ -1.17
FOXN3-215ENST00000557261 STK17AQ9UEE5 414 aa7.73□□□□□ -1.17
FOXN3-215ENST00000557261 PFDN2Q9UHV9 154 aa7.73□□□□□ -1.17
FOXN3-215ENST00000557261 MAPK8IP1Q9UQF2 711 aa7.73□□□□□ -1.17
FOXN3-215ENST00000557261 ZNF521Q96K83 1311 aa7.73□□□□□ -1.17
FOXN3-215ENST00000557261 SRCAPQ6ZRS2 3230 aa7.73□□□□□ -1.17
FOXN3-215ENST00000557261 FLT4P35916 1363 aa7.72□□□□□ -1.17
FOXN3-215ENST00000557261 H3BM21 787 aa7.72□□□□□ -1.17
FOXN3-215ENST00000557261 PDPK1O15530 556 aa7.72□□□□□ -1.17
FOXN3-215ENST00000557261 EPB42P16452 691 aa7.72□□□□□ -1.17
FOXN3-215ENST00000557261 CLCQ05315 142 aa7.72□□□□□ -1.17
FOXN3-215ENST00000557261 C6orf118Q5T5N4 469 aa7.72□□□□□ -1.17
FOXN3-215ENST00000557261 LARP1BQ659C4 914 aaKnown RBP7.72□□□□□ -1.17
FOXN3-215ENST00000557261 RUFY4Q6ZNE9 571 aa7.72□□□□□ -1.17
FOXN3-215ENST00000557261 SPATC1Q76KD6 591 aa7.72□□□□□ -1.17
FOXN3-215ENST00000557261 LRP10Q7Z4F1 713 aa7.72□□□□□ -1.17
FOXN3-215ENST00000557261 NME9Q86XW9 330 aa7.72□□□□□ -1.17
FOXN3-215ENST00000557261 HOMER1Q86YM7 354 aa7.72□□□□□ -1.17
FOXN3-215ENST00000557261 NPAS3Q8IXF0 933 aa7.72□□□□□ -1.17
FOXN3-215ENST00000557261 RAVER1Q8IY67 606 aaKnown RBP7.72□□□□□ -1.17
FOXN3-215ENST00000557261 NECAB3Q96P71 396 aaPredicted RBP7.72□□□□□ -1.17
FOXN3-215ENST00000557261 PNNQ9H307 717 aaKnown RBP7.72□□□□□ -1.17
FOXN3-215ENST00000557261 TIMMDC1Q9NPL8 285 aa7.72□□□□□ -1.17
FOXN3-215ENST00000557261 SEC31BQ9NQW1 1179 aa7.72□□□□□ -1.17
FOXN3-215ENST00000557261 TMEM260Q9NX78 707 aa7.72□□□□□ -1.17
FOXN3-215ENST00000557261 ACTR10Q9NZ32 417 aa7.72□□□□□ -1.17
FOXN3-215ENST00000557261 GABBR1Q9UBS5 961 aa7.72□□□□□ -1.17
FOXN3-215ENST00000557261 HCN2Q9UL51 889 aa7.72□□□□□ -1.17
FOXN3-215ENST00000557261 ADAMTS8Q9UP79 889 aa7.72□□□□□ -1.17
FOXN3-215ENST00000557261 NUDCQ9Y266 331 aa7.72□□□□□ -1.17
FOXN3-215ENST00000557261 FAN1Q9Y2M0 1017 aa7.72□□□□□ -1.17
FOXN3-215ENST00000557261 USP19O94966 1318 aa7.72□□□□□ -1.17
FOXN3-215ENST00000557261 AHDC1Q5TGY3 1603 aaPredicted RBP7.71□□□□□ -1.17
FOXN3-215ENST00000557261 TNS3Q68CZ2 1445 aa7.71□□□□□ -1.17
FOXN3-215ENST00000557261 LMO7Q8WWI1 1683 aa7.71□□□□□ -1.18
FOXN3-215ENST00000557261 GJB6O95452 261 aa7.71□□□□□ -1.18
FOXN3-215ENST00000557261 ATF3P18847 181 aa7.71□□□□□ -1.18
FOXN3-215ENST00000557261 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.71□□□□□ -1.18
FOXN3-215ENST00000557261 IRF7Q92985 503 aa7.71□□□□□ -1.18
FOXN3-215ENST00000557261 IER2Q9BTL4 223 aa7.71□□□□□ -1.18
FOXN3-215ENST00000557261 SLKQ9H2G2 1235 aaPredicted RBP7.71□□□□□ -1.18
FOXN3-215ENST00000557261 BRMS1Q9HCU9 246 aa7.71□□□□□ -1.18
FOXN3-215ENST00000557261 POLKQ9UBT6 870 aa7.71□□□□□ -1.18
FOXN3-215ENST00000557261 PRKAB1Q9Y478 270 aa7.71□□□□□ -1.18
FOXN3-215ENST00000557261 DLG5Q8TDM6 1919 aa7.71□□□□□ -1.18
FOXN3-215ENST00000557261 NPHP3Q7Z494 1330 aa7.71□□□□□ -1.18
FOXN3-215ENST00000557261 ARHGEF10O15013 1369 aa7.71□□□□□ -1.18
FOXN3-215ENST00000557261 KDRP35968 1356 aa7.71□□□□□ -1.18
FOXN3-215ENST00000557261 COL22A1Q8NFW1 1626 aaPredicted RBP7.7□□□□□ -1.18
FOXN3-215ENST00000557261 NCAPD2Q15021 1401 aa7.7□□□□□ -1.18
FOXN3-215ENST00000557261 FAM221AA4D161 298 aa7.7□□□□□ -1.18
FOXN3-215ENST00000557261 RLBP1P12271 317 aa7.7□□□□□ -1.18
FOXN3-215ENST00000557261 GMPRP36959 345 aa7.7□□□□□ -1.18
FOXN3-215ENST00000557261 IFRD2Q12894 506 aaPredicted RBP7.7□□□□□ -1.18
FOXN3-215ENST00000557261 GK5Q6ZS86 529 aa7.7□□□□□ -1.18
FOXN3-215ENST00000557261 JAMLQ86YT9 394 aa7.7□□□□□ -1.18
FOXN3-215ENST00000557261 LINC00528Q8N1L1 170 aa7.7□□□□□ -1.18
FOXN3-215ENST00000557261 STK35Q8TDR2 534 aa7.7□□□□□ -1.18
FOXN3-215ENST00000557261 RUNDC1Q96C34 613 aa7.7□□□□□ -1.18
FOXN3-215ENST00000557261 FERD3LQ96RJ6 166 aa7.7□□□□□ -1.18
FOXN3-215ENST00000557261 TSEN34Q9BSV6 310 aaKnown RBP7.7□□□□□ -1.18
FOXN3-215ENST00000557261 GSX2Q9BZM3 304 aa7.7□□□□□ -1.18
FOXN3-215ENST00000557261 STRN4Q9NRL3 753 aa7.7□□□□□ -1.18
FOXN3-215ENST00000557261 GJA3Q9Y6H8 435 aa7.7□□□□□ -1.18
FOXN3-215ENST00000557261 ERBB4Q15303 1308 aa7.7□□□□□ -1.18
FOXN3-215ENST00000557261 PHF20L1A8MW92 1017 aa7.69□□□□□ -1.18
FOXN3-215ENST00000557261 S100BP04271 92 aaPredicted RBP7.69□□□□□ -1.18
FOXN3-215ENST00000557261 PDGFRBP09619 1106 aa7.69□□□□□ -1.18
FOXN3-215ENST00000557261 RASGRF1Q13972 1273 aa7.69□□□□□ -1.18
FOXN3-215ENST00000557261 CNGB1Q14028 1251 aaPredicted RBP7.69□□□□□ -1.18
FOXN3-215ENST00000557261 TNNI3KQ59H18 835 aa7.69□□□□□ -1.18
FOXN3-215ENST00000557261 C16orf86Q6ZW13 317 aa7.69□□□□□ -1.18
FOXN3-215ENST00000557261 LYSMD3Q7Z3D4 306 aa7.69□□□□□ -1.18
FOXN3-215ENST00000557261 LSRQ86X29 649 aaPredicted RBP7.69□□□□□ -1.18
FOXN3-215ENST00000557261 FMNL3Q8IVF7 1028 aa7.69□□□□□ -1.18
FOXN3-215ENST00000557261 KCNH5Q8NCM2 988 aa7.69□□□□□ -1.18
FOXN3-215ENST00000557261 JDP2Q8WYK2 163 aa7.69□□□□□ -1.18
FOXN3-215ENST00000557261 ANTXR1Q9H6X2 564 aa7.69□□□□□ -1.18
FOXN3-215ENST00000557261 RIPOR2Q9Y4F9 1068 aa7.69□□□□□ -1.18
FOXN3-215ENST00000557261 CD2APQ9Y5K6 639 aa7.69□□□□□ -1.18
FOXN3-215ENST00000557261 PTCH2Q9Y6C5 1203 aa7.69□□□□□ -1.18
FOXN3-215ENST00000557261 LRRC37A3O60309 1634 aa7.69□□□□□ -1.18
FOXN3-215ENST00000557261 COL18A1P39060 1754 aa7.69□□□□□ -1.18
FOXN3-215ENST00000557261 A0A1B0GTH6 734 aa7.68□□□□□ -1.18
FOXN3-215ENST00000557261 FIGNL2A6NMB9 653 aa7.68□□□□□ -1.18
FOXN3-215ENST00000557261 NFKBIEO00221 500 aa7.68□□□□□ -1.18
FOXN3-215ENST00000557261 MAN1A2O60476 641 aa7.68□□□□□ -1.18
FOXN3-215ENST00000557261 PEX14O75381 377 aa7.68□□□□□ -1.18
FOXN3-215ENST00000557261 THBS1P07996 1170 aa7.68□□□□□ -1.18
FOXN3-215ENST00000557261 RARAP10276 462 aa7.68□□□□□ -1.18
FOXN3-215ENST00000557261 BMP2P12643 396 aa7.68□□□□□ -1.18
FOXN3-215ENST00000557261 POU3F3P20264 500 aaPredicted RBP7.68□□□□□ -1.18
FOXN3-215ENST00000557261 CDKN1CP49918 316 aaPredicted RBP7.68□□□□□ -1.18
FOXN3-215ENST00000557261 MTERF2Q49AM1 385 aa7.68□□□□□ -1.18
FOXN3-215ENST00000557261 MRM1Q6IN84 353 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms