RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 KRTAP9-6A0A140TA67 174 aa6.56□□□□□ -1.36
SCFD1-223ENST00000557076 SERPINB2P05120 415 aa6.56□□□□□ -1.36
SCFD1-223ENST00000557076 USPL1Q5W0Q7 1092 aa6.56□□□□□ -1.36
SCFD1-223ENST00000557076 DZIP1LQ8IYY4 767 aaKnown RBP6.56□□□□□ -1.36
SCFD1-223ENST00000557076 TMEM130Q8N3G9 435 aa6.56□□□□□ -1.36
SCFD1-223ENST00000557076 CAPNS2Q96L46 248 aa6.56□□□□□ -1.36
SCFD1-223ENST00000557076 MUC3BQ9H195 1237 aa6.56□□□□□ -1.36
SCFD1-223ENST00000557076 GGNBP2Q9H3C7 697 aa6.56□□□□□ -1.36
SCFD1-223ENST00000557076 NARFQ9UHQ1 456 aa6.56□□□□□ -1.36
SCFD1-223ENST00000557076 KCNMB2Q9Y691 235 aa6.56□□□□□ -1.36
SCFD1-223ENST00000557076 FLT4P35916 1363 aa6.56□□□□□ -1.36
SCFD1-223ENST00000557076 WASHC2AQ641Q2 1341 aa6.55□□□□□ -1.36
SCFD1-223ENST00000557076 LTN1O94822 1766 aa6.55□□□□□ -1.36
SCFD1-223ENST00000557076 MMP20O60882 483 aa6.55□□□□□ -1.36
SCFD1-223ENST00000557076 PTCD1O75127 700 aaKnown RBP6.55□□□□□ -1.36
SCFD1-223ENST00000557076 CABP4P57796 275 aa6.55□□□□□ -1.36
SCFD1-223ENST00000557076 COX20Q5RI15 118 aa6.55□□□□□ -1.36
SCFD1-223ENST00000557076 IL22RA1Q8N6P7 574 aa6.55□□□□□ -1.36
SCFD1-223ENST00000557076 ZNF622Q969S3 477 aaKnown RBP eCLIP6.55□□□□□ -1.36
SCFD1-223ENST00000557076 BRIP1Q9BX63 1249 aa6.55□□□□□ -1.36
SCFD1-223ENST00000557076 TAOK3Q9H2K8 898 aa6.55□□□□□ -1.36
SCFD1-223ENST00000557076 DDX21Q9NR30 783 aaKnown RBP eCLIP6.55□□□□□ -1.36
SCFD1-223ENST00000557076 HACL1Q9UJ83 578 aa6.55□□□□□ -1.36
SCFD1-223ENST00000557076 ABT1Q9ULW3 272 aaKnown RBP6.55□□□□□ -1.36
SCFD1-223ENST00000557076 USP20Q9Y2K6 914 aa6.55□□□□□ -1.36
SCFD1-223ENST00000557076 C4AP0C0L4 1744 aa6.55□□□□□ -1.36
SCFD1-223ENST00000557076 BRCA1P38398 1863 aaKnown RBP6.55□□□□□ -1.36
SCFD1-223ENST00000557076 J3QW42 95 aa6.54□□□□□ -1.36
SCFD1-223ENST00000557076 RFX1P22670 979 aa6.54□□□□□ -1.36
SCFD1-223ENST00000557076 EPHX2P34913 555 aa6.54□□□□□ -1.36
SCFD1-223ENST00000557076 PDE6BP35913 854 aa6.54□□□□□ -1.36
SCFD1-223ENST00000557076 FKBP5Q13451 457 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-223ENST00000557076 EAPPQ56P03 285 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-223ENST00000557076 SOGA3Q5TF21 947 aa6.54□□□□□ -1.36
SCFD1-223ENST00000557076 MAP1SQ66K74 1059 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-223ENST00000557076 GDF6Q6KF10 455 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-223ENST00000557076 NSUN5Q96P11 429 aaKnown RBP6.54□□□□□ -1.36
SCFD1-223ENST00000557076 CARD11Q9BXL7 1154 aa6.54□□□□□ -1.36
SCFD1-223ENST00000557076 FAM13BQ9NYF5 915 aa6.54□□□□□ -1.36
SCFD1-223ENST00000557076 NOVA2Q9UNW9 492 aaKnown RBP6.54□□□□□ -1.36
SCFD1-223ENST00000557076 PKD1L3Q7Z443 1732 aa6.53□□□□□ -1.36
SCFD1-223ENST00000557076 NCAPD2Q15021 1401 aa6.53□□□□□ -1.36
SCFD1-223ENST00000557076 F8W735 103 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-223ENST00000557076 BRD2P25440 801 aaKnown RBP6.53□□□□□ -1.36
SCFD1-223ENST00000557076 PLEKHO1Q53GL0 409 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-223ENST00000557076 CST9Q5W186 159 aa6.53□□□□□ -1.36
SCFD1-223ENST00000557076 Q6ZS46 218 aa6.53□□□□□ -1.36
SCFD1-223ENST00000557076 MON2Q7Z3U7 1717 aa6.53□□□□□ -1.36
SCFD1-223ENST00000557076 ST20-MTHFSA0A0A6YYL1 179 aa6.52□□□□□ -1.37
SCFD1-223ENST00000557076 FZD9O00144 591 aa6.52□□□□□ -1.37
SCFD1-223ENST00000557076 FSTP19883 344 aa6.52□□□□□ -1.37
SCFD1-223ENST00000557076 MTHFSP49914 203 aa6.52□□□□□ -1.37
SCFD1-223ENST00000557076 SETDB1Q15047 1291 aa6.52□□□□□ -1.37
SCFD1-223ENST00000557076 AMOTQ4VCS5 1084 aa6.52□□□□□ -1.37
SCFD1-223ENST00000557076 STYK1Q6J9G0 422 aa6.52□□□□□ -1.37
SCFD1-223ENST00000557076 CYP4F22Q6NT55 531 aa6.52□□□□□ -1.37
SCFD1-223ENST00000557076 C16orf46Q6P387 395 aa6.52□□□□□ -1.37
SCFD1-223ENST00000557076 COL26A1Q96A83 441 aa6.52□□□□□ -1.37
SCFD1-223ENST00000557076 GCC1Q96CN9 775 aa6.52□□□□□ -1.37
SCFD1-223ENST00000557076 HHIPL1Q96JK4 782 aa6.52□□□□□ -1.37
SCFD1-223ENST00000557076 TESK2Q96S53 571 aa6.52□□□□□ -1.37
SCFD1-223ENST00000557076 SOS1Q07889 1333 aaPredicted RBP6.51□□□□□ -1.37
SCFD1-223ENST00000557076 ITGB4P16144 1822 aa6.51□□□□□ -1.37
SCFD1-223ENST00000557076 PPM1GO15355 546 aaPredicted RBP6.51□□□□□ -1.37
SCFD1-223ENST00000557076 GSC2O15499 205 aa6.51□□□□□ -1.37
SCFD1-223ENST00000557076 ALX3O95076 343 aa6.51□□□□□ -1.37
SCFD1-223ENST00000557076 CYP19A1P11511 503 aaPredicted RBP6.51□□□□□ -1.37
SCFD1-223ENST00000557076 ELOAQ14241 798 aaKnown RBP6.51□□□□□ -1.37
SCFD1-223ENST00000557076 ETFBKMTQ8IXQ9 262 aa6.51□□□□□ -1.37
SCFD1-223ENST00000557076 GPC2Q8N158 579 aa6.51□□□□□ -1.37
SCFD1-223ENST00000557076 PIK3R5Q8WYR1 880 aa6.51□□□□□ -1.37
SCFD1-223ENST00000557076 PCMTD2Q9NV79 361 aa6.51□□□□□ -1.37
SCFD1-223ENST00000557076 PPME1Q9Y570 386 aa6.51□□□□□ -1.37
SCFD1-223ENST00000557076 MYH14Q7Z406 1995 aaKnown RBP6.5□□□□□ -1.37
SCFD1-223ENST00000557076 AOC2O75106 756 aa6.5□□□□□ -1.37
SCFD1-223ENST00000557076 SRGNP10124 158 aa6.5□□□□□ -1.37
SCFD1-223ENST00000557076 TRIP4Q15650 581 aaPredicted RBP6.5□□□□□ -1.37
SCFD1-223ENST00000557076 PRPF40BQ6NWY9 871 aaKnown RBP6.5□□□□□ -1.37
SCFD1-223ENST00000557076 SAPCD2Q86UD0 394 aa6.5□□□□□ -1.37
SCFD1-223ENST00000557076 DNAJC10Q8IXB1 793 aa6.5□□□□□ -1.37
SCFD1-223ENST00000557076 RTKN2Q8IZC4 609 aa6.5□□□□□ -1.37
SCFD1-223ENST00000557076 MASTLQ96GX5 879 aa6.5□□□□□ -1.37
SCFD1-223ENST00000557076 PRIMPOLQ96LW4 560 aa6.5□□□□□ -1.37
SCFD1-223ENST00000557076 SIN3AQ96ST3 1273 aa6.5□□□□□ -1.37
SCFD1-223ENST00000557076 TRIM33Q9UPN9 1127 aa6.5□□□□□ -1.37
SCFD1-223ENST00000557076 FNDC3AQ9Y2H6 1198 aaKnown RBP6.5□□□□□ -1.37
SCFD1-223ENST00000557076 MKI67P46013 3256 aaKnown RBP6.49□□□□□ -1.37
SCFD1-223ENST00000557076 RGPD2P0DJD1 1756 aa6.49□□□□□ -1.37
SCFD1-223ENST00000557076 VIRMAQ69YN4 1812 aaKnown RBP6.49□□□□□ -1.37
SCFD1-223ENST00000557076 A0A087WZG4 1122 aa6.49□□□□□ -1.37
SCFD1-223ENST00000557076 PRMT3O60678 531 aa6.49□□□□□ -1.37
SCFD1-223ENST00000557076 GLB1P16278 677 aa6.49□□□□□ -1.37
SCFD1-223ENST00000557076 EIF5P55010 431 aaKnown RBP6.49□□□□□ -1.37
SCFD1-223ENST00000557076 HYAL2Q12891 473 aa6.49□□□□□ -1.37
SCFD1-223ENST00000557076 OCLNQ16625 522 aa6.49□□□□□ -1.37
SCFD1-223ENST00000557076 CDCA8Q53HL2 280 aa6.49□□□□□ -1.37
SCFD1-223ENST00000557076 ZNF530Q6P9A1 599 aaPredicted RBP6.49□□□□□ -1.37
SCFD1-223ENST00000557076 USP50Q70EL3 339 aaPredicted RBP6.49□□□□□ -1.37
SCFD1-223ENST00000557076 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.49□□□□□ -1.37
SCFD1-223ENST00000557076 OR13H1Q8NG92 308 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms