RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, human

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLIRP-208	ENST00000556956	GSTP1	P09211	210 aa	Known RBP	3.77	□□□□□ -1.81
SLIRP-208	ENST00000556956	MAPK8	P45983	427 aa		3.77	□□□□□ -1.81
SLIRP-208	ENST00000556956	IKZF1	Q13422	519 aa		3.77	□□□□□ -1.81
SLIRP-208	ENST00000556956	TCERG1L	Q5VWI1	586 aa		3.77	□□□□□ -1.81
SLIRP-208	ENST00000556956	SCARA3	Q6AZY7	606 aa		3.77	□□□□□ -1.81
SLIRP-208	ENST00000556956	ZDHHC14	Q8IZN3	488 aa		3.77	□□□□□ -1.81
SLIRP-208	ENST00000556956	BAHD1	Q8TBE0	780 aa	Predicted RBP	3.77	□□□□□ -1.81
SLIRP-208	ENST00000556956	UBE2Q2	Q8WVN8	375 aa		3.77	□□□□□ -1.81
SLIRP-208	ENST00000556956	TRIM56	Q9BRZ2	755 aa	Known RBP	3.77	□□□□□ -1.81
SLIRP-208	ENST00000556956	ATXN3L	Q9H3M9	355 aa		3.77	□□□□□ -1.81
SLIRP-208	ENST00000556956	PIDD1	Q9HB75	910 aa		3.77	□□□□□ -1.81
SLIRP-208	ENST00000556956	SEMA3G	Q9NS98	782 aa		3.77	□□□□□ -1.81
SLIRP-208	ENST00000556956	AP4E1	Q9UPM8	1137 aa		3.77	□□□□□ -1.81
SLIRP-208	ENST00000556956	CCDC7	Q96M83	1385 aa		3.76	□□□□□ -1.81
SLIRP-208	ENST00000556956	CFTR	P13569	1480 aa		3.76	□□□□□ -1.81
SLIRP-208	ENST00000556956	TMEM265	A0A087WTH1	108 aa		3.76	□□□□□ -1.81
SLIRP-208	ENST00000556956	FAM87A	P0C7U9	286 aa		3.76	□□□□□ -1.81
SLIRP-208	ENST00000556956	NME2	P22392	152 aa		3.76	□□□□□ -1.81
SLIRP-208	ENST00000556956	ARNT	P27540	789 aa		3.76	□□□□□ -1.81
SLIRP-208	ENST00000556956	ZNF157	P51786	506 aa	Predicted RBP	3.76	□□□□□ -1.81
SLIRP-208	ENST00000556956	OXCT1	P55809	520 aa		3.76	□□□□□ -1.81
SLIRP-208	ENST00000556956	ID3	Q02535	119 aa		3.76	□□□□□ -1.81
SLIRP-208	ENST00000556956	LRRC14	Q15048	493 aa		3.76	□□□□□ -1.81
SLIRP-208	ENST00000556956	NXPE4	Q6UWF7	544 aa		3.76	□□□□□ -1.81
SLIRP-208	ENST00000556956	HHIPL2	Q6UWX4	724 aa		3.76	□□□□□ -1.81
SLIRP-208	ENST00000556956	KCNB2	Q92953	911 aa		3.76	□□□□□ -1.81
SLIRP-208	ENST00000556956	GSX1	Q9H4S2	264 aa	Predicted RBP	3.76	□□□□□ -1.81
SLIRP-208	ENST00000556956	DAGLA	Q9Y4D2	1042 aa		3.76	□□□□□ -1.81
SLIRP-208	ENST00000556956	HFM1	A2PYH4	1435 aa		3.76	□□□□□ -1.81
SLIRP-208	ENST00000556956	FMN1	Q68DA7	1419 aa		3.76	□□□□□ -1.81
SLIRP-208	ENST00000556956	ARID4B	Q4LE39	1312 aa	Predicted RBP	3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	AQR	O60306	1485 aa	Known RBP eCLIP	3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	NCOA2	Q15596	1464 aa		3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	CCDC18	Q5T9S5	1454 aa		3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	MATN3	O15232	486 aa		3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	LIG1	P18858	919 aa		3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	FMR1	Q06787	632 aa	Known RBP eCLIP	3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	CDK5R2	Q13319	367 aa		3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	KIF4B	Q2VIQ3	1234 aa		3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	CCDC184	Q52MB2	194 aa		3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	ANKRD24	Q8TF21	1146 aa		3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	SLC26A8	Q96RN1	970 aa		3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	WDR18	Q9BV38	432 aa		3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	ADAM7	Q9H2U9	754 aa		3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	SLITRK6	Q9H5Y7	841 aa		3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	SSU72	Q9NP77	194 aa	Known RBP	3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	FAM8A1	Q9UBU6	413 aa		3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	PCOLCE2	Q9UKZ9	415 aa		3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	NCOA1	Q15788	1441 aa		3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	FGD6	Q6ZV73	1430 aa		3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	CASKIN1	Q8WXD9	1431 aa		3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	DNMBP	Q6XZF7	1577 aa		3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	CUX1	P39880	1505 aa		3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	PBRM1	Q86U86	1689 aa		3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	CTTNBP2	Q8WZ74	1663 aa		3.75	□□□□□ -1.81
SLIRP-208	ENST00000556956	RNGTT	O60942	597 aa	Known RBP	3.74	□□□□□ -1.81
SLIRP-208	ENST00000556956	SASH1	O94885	1247 aa		3.74	□□□□□ -1.81
SLIRP-208	ENST00000556956	SLPI	P03973	132 aa		3.74	□□□□□ -1.81
SLIRP-208	ENST00000556956	PLP2	Q04941	152 aa		3.74	□□□□□ -1.81
SLIRP-208	ENST00000556956	FAAP100	Q0VG06	881 aa		3.74	□□□□□ -1.81
SLIRP-208	ENST00000556956	NPM2	Q86SE8	214 aa	Known RBP	3.74	□□□□□ -1.81
SLIRP-208	ENST00000556956	SULF2	Q8IWU5	870 aa		3.74	□□□□□ -1.81
SLIRP-208	ENST00000556956	SMYD4	Q8IYR2	804 aa	Predicted RBP	3.74	□□□□□ -1.81
SLIRP-208	ENST00000556956	ACSBG1	Q96GR2	724 aa		3.74	□□□□□ -1.81
SLIRP-208	ENST00000556956	MPHOSPH9	Q99550	1183 aa		3.74	□□□□□ -1.81
SLIRP-208	ENST00000556956	MRI	Q9BWK5	157 aa		3.74	□□□□□ -1.81
SLIRP-208	ENST00000556956	BACH2	Q9BYV9	841 aa		3.74	□□□□□ -1.81
SLIRP-208	ENST00000556956	ZC3H12C	Q9C0D7	883 aa	Known RBP	3.74	□□□□□ -1.81
SLIRP-208	ENST00000556956	CCDC86	Q9H6F5	360 aa	Known RBP	3.74	□□□□□ -1.81
SLIRP-208	ENST00000556956	CBX8	Q9HC52	389 aa		3.74	□□□□□ -1.81
SLIRP-208	ENST00000556956	PICK1	Q9NRD5	415 aa		3.74	□□□□□ -1.81
SLIRP-208	ENST00000556956	CYP8B1	Q9UNU6	501 aa		3.74	□□□□□ -1.81
SLIRP-208	ENST00000556956	MTUS2	Q5JR59	1369 aa		3.74	□□□□□ -1.81
SLIRP-208	ENST00000556956	FGD5	Q6ZNL6	1462 aa		3.73	□□□□□ -1.81
SLIRP-208	ENST00000556956	FYCO1	Q9BQS8	1478 aa		3.73	□□□□□ -1.81
SLIRP-208	ENST00000556956	NAIP	Q13075	1403 aa		3.73	□□□□□ -1.81
SLIRP-208	ENST00000556956	LDHB	P07195	334 aa	Known RBP	3.73	□□□□□ -1.81
SLIRP-208	ENST00000556956	SRF	P11831	508 aa		3.73	□□□□□ -1.81
SLIRP-208	ENST00000556956	ITIH2	P19823	946 aa		3.73	□□□□□ -1.81
SLIRP-208	ENST00000556956	LMNB1	P20700	586 aa		3.73	□□□□□ -1.81
SLIRP-208	ENST00000556956	RRP1	P56182	461 aa	Known RBP	3.73	□□□□□ -1.81
SLIRP-208	ENST00000556956	ERVK-24	P63145	666 aa		3.73	□□□□□ -1.81
SLIRP-208	ENST00000556956	MAP1S	Q66K74	1059 aa	Predicted RBP	3.73	□□□□□ -1.81
SLIRP-208	ENST00000556956	PI16	Q6UXB8	463 aa		3.73	□□□□□ -1.81
SLIRP-208	ENST00000556956	CDC37L1	Q7L3B6	337 aa		3.73	□□□□□ -1.81
SLIRP-208	ENST00000556956	AEBP1	Q8IUX7	1158 aa		3.73	□□□□□ -1.81
SLIRP-208	ENST00000556956	KCT2	Q8NC54	265 aa		3.73	□□□□□ -1.81
SLIRP-208	ENST00000556956	NECAB3	Q96P71	396 aa	Predicted RBP	3.73	□□□□□ -1.81
SLIRP-208	ENST00000556956	FANCD2OS	Q96PS1	177 aa		3.73	□□□□□ -1.81
SLIRP-208	ENST00000556956	TNKS2	Q9H2K2	1166 aa		3.73	□□□□□ -1.81
SLIRP-208	ENST00000556956	MKNK2	Q9HBH9	465 aa		3.73	□□□□□ -1.81
SLIRP-208	ENST00000556956	PPP1R9A	Q9ULJ8	1098 aa		3.73	□□□□□ -1.81
SLIRP-208	ENST00000556956	LAS1L	Q9Y4W2	734 aa	Known RBP	3.73	□□□□□ -1.81
SLIRP-208	ENST00000556956	KIF7	Q2M1P5	1343 aa		3.72	□□□□□ -1.81
SLIRP-208	ENST00000556956	CUL7	Q14999	1698 aa		3.72	□□□□□ -1.81
SLIRP-208	ENST00000556956	TMPRSS2	O15393	492 aa		3.72	□□□□□ -1.81
SLIRP-208	ENST00000556956	PRPF40A	O75400	957 aa	Known RBP	3.72	□□□□□ -1.81
SLIRP-208	ENST00000556956	LEFTY1	O75610	366 aa		3.72	□□□□□ -1.81
SLIRP-208	ENST00000556956	TRIM37	O94972	964 aa		3.72	□□□□□ -1.81
SLIRP-208	ENST00000556956	ECEL1	O95672	775 aa		3.72	□□□□□ -1.81

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