RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 KAT14Q9H8E8 782 aa16.1■□□□□ 0.17
EFCAB11-212ENST00000556639 VEZTQ9HBM0 779 aa16.1■□□□□ 0.17
EFCAB11-212ENST00000556639 TCP11L1Q9NUJ3 509 aa16.1■□□□□ 0.17
EFCAB11-212ENST00000556639 WNT10BO00744 389 aa16.09■□□□□ 0.17
EFCAB11-212ENST00000556639 NCLP19338 710 aaKnown RBP16.09■□□□□ 0.17
EFCAB11-212ENST00000556639 GMPSP49915 693 aaPredicted RBP16.09■□□□□ 0.17
EFCAB11-212ENST00000556639 ANKS1AQ92625 1134 aa16.09■□□□□ 0.17
EFCAB11-212ENST00000556639 C8orf76Q96K31 380 aa16.09■□□□□ 0.17
EFCAB11-212ENST00000556639 ALG1Q9BT22 464 aa16.09■□□□□ 0.17
EFCAB11-212ENST00000556639 FMNL1O95466 1100 aaPredicted RBP16.08■□□□□ 0.17
EFCAB11-212ENST00000556639 SSRP1Q08945 709 aaKnown RBP16.08■□□□□ 0.17
EFCAB11-212ENST00000556639 FUT2Q10981 343 aa16.08■□□□□ 0.17
EFCAB11-212ENST00000556639 TNIP1Q15025 636 aa16.08■□□□□ 0.17
EFCAB11-212ENST00000556639 CPLX2Q6PUV4 134 aaKnown RBP16.08■□□□□ 0.17
EFCAB11-212ENST00000556639 SAMD7Q7Z3H4 446 aa16.08■□□□□ 0.17
EFCAB11-212ENST00000556639 STAG2Q8N3U4 1231 aa16.08■□□□□ 0.17
EFCAB11-212ENST00000556639 MYOZ2Q9NPC6 264 aa16.08■□□□□ 0.17
EFCAB11-212ENST00000556639 TFIP11Q9UBB9 837 aaKnown RBP16.08■□□□□ 0.17
EFCAB11-212ENST00000556639 MYH8P13535 1937 aa16.08■□□□□ 0.17
EFCAB11-212ENST00000556639 CNTNAP1P78357 1384 aa16.08■□□□□ 0.16
EFCAB11-212ENST00000556639 ASTN2O75129 1339 aaPredicted RBP16.08■□□□□ 0.16
EFCAB11-212ENST00000556639 GADD45BO75293 160 aaPredicted RBP16.08■□□□□ 0.16
EFCAB11-212ENST00000556639 CDKL5O76039 1030 aa16.08■□□□□ 0.16
EFCAB11-212ENST00000556639 SPDYE2Q495Y8 402 aa16.08■□□□□ 0.16
EFCAB11-212ENST00000556639 USP48Q86UV5 1035 aa16.08■□□□□ 0.16
EFCAB11-212ENST00000556639 SRBD1Q8N5C6 995 aaKnown RBP16.08■□□□□ 0.16
EFCAB11-212ENST00000556639 FBXO18Q8NFZ0 1043 aa16.08■□□□□ 0.16
EFCAB11-212ENST00000556639 ZBED3Q96IU2 234 aaPredicted RBP16.08■□□□□ 0.16
EFCAB11-212ENST00000556639 GZF1Q9H116 711 aaPredicted RBP16.08■□□□□ 0.16
EFCAB11-212ENST00000556639 PI4KBQ9UBF8 816 aa16.08■□□□□ 0.16
EFCAB11-212ENST00000556639 GOLGA6L22H0YM25 854 aa16.07■□□□□ 0.16
EFCAB11-212ENST00000556639 FIBPO43427 364 aa16.07■□□□□ 0.16
EFCAB11-212ENST00000556639 DDAH1O94760 285 aa16.07■□□□□ 0.16
EFCAB11-212ENST00000556639 YBX3P16989 372 aaKnown RBP eCLIP16.07■□□□□ 0.16
EFCAB11-212ENST00000556639 PIBF1Q8WXW3 757 aa16.07■□□□□ 0.16
EFCAB11-212ENST00000556639 DHX36Q9H2U1 1008 aaKnown RBP16.07■□□□□ 0.16
EFCAB11-212ENST00000556639 KIF3AQ9Y496 699 aa16.07■□□□□ 0.16
EFCAB11-212ENST00000556639 MPHOSPH10O00566 681 aaKnown RBP16.07■□□□□ 0.16
EFCAB11-212ENST00000556639 ENTPD3O75355 529 aa16.07■□□□□ 0.16
EFCAB11-212ENST00000556639 RCAN1P53805 252 aa16.07■□□□□ 0.16
EFCAB11-212ENST00000556639 JAG1P78504 1218 aa16.07■□□□□ 0.16
EFCAB11-212ENST00000556639 RRP1BQ14684 758 aaKnown RBP16.07■□□□□ 0.16
EFCAB11-212ENST00000556639 SHISA4Q96DD7 197 aa16.07■□□□□ 0.16
EFCAB11-212ENST00000556639 TMEM39BQ9GZU3 492 aa16.07■□□□□ 0.16
EFCAB11-212ENST00000556639 EHD4Q9H223 541 aa16.07■□□□□ 0.16
EFCAB11-212ENST00000556639 SWAP70Q9UH65 585 aa16.07■□□□□ 0.16
EFCAB11-212ENST00000556639 KIF28PB7ZC32 967 aa16.06■□□□□ 0.16
EFCAB11-212ENST00000556639 NPM3O75607 178 aaKnown RBP16.06■□□□□ 0.16
EFCAB11-212ENST00000556639 GOLGA8HP0CJ92 632 aa16.06■□□□□ 0.16
EFCAB11-212ENST00000556639 VEGFAP15692 232 aaPredicted RBP16.06■□□□□ 0.16
EFCAB11-212ENST00000556639 TBC1D10BQ4KMP7 808 aaPredicted RBP16.06■□□□□ 0.16
EFCAB11-212ENST00000556639 MICALL2Q8IY33 904 aa16.06■□□□□ 0.16
EFCAB11-212ENST00000556639 CSRNP1Q96S65 589 aa16.06■□□□□ 0.16
EFCAB11-212ENST00000556639 FTOQ9C0B1 505 aaKnown RBP eCLIP16.06■□□□□ 0.16
EFCAB11-212ENST00000556639 CPVLQ9H3G5 476 aa16.06■□□□□ 0.16
EFCAB11-212ENST00000556639 V9GY48 417 aaPredicted RBP16.06■□□□□ 0.16
EFCAB11-212ENST00000556639 IGKV6D-41A0A0C4DH26 115 aa16.06■□□□□ 0.16
EFCAB11-212ENST00000556639 CCDC196A0A1B0GTZ2 297 aa16.06■□□□□ 0.16
EFCAB11-212ENST00000556639 SLC35G1Q2M3R5 365 aa16.06■□□□□ 0.16
EFCAB11-212ENST00000556639 KRT40Q6A162 431 aa16.06■□□□□ 0.16
EFCAB11-212ENST00000556639 TMTC3Q6ZXV5 915 aa16.06■□□□□ 0.16
EFCAB11-212ENST00000556639 LRRC47Q8N1G4 583 aaKnown RBP16.06■□□□□ 0.16
EFCAB11-212ENST00000556639 MTMR14Q8NCE2 650 aa16.06■□□□□ 0.16
EFCAB11-212ENST00000556639 CTCFLQ8NI51 663 aaPredicted RBP16.06■□□□□ 0.16
EFCAB11-212ENST00000556639 GPT2Q8TD30 523 aa16.06■□□□□ 0.16
EFCAB11-212ENST00000556639 MTMR4Q9NYA4 1195 aa16.06■□□□□ 0.16
EFCAB11-212ENST00000556639 TMOD2Q9NZR1 351 aa16.06■□□□□ 0.16
EFCAB11-212ENST00000556639 CNOT7Q9UIV1 285 aaKnown RBP16.06■□□□□ 0.16
EFCAB11-212ENST00000556639 GDF11O95390 407 aa16.05■□□□□ 0.16
EFCAB11-212ENST00000556639 CALM1P0DP23 149 aa16.05■□□□□ 0.16
EFCAB11-212ENST00000556639 CALM2P0DP24 149 aa16.05■□□□□ 0.16
EFCAB11-212ENST00000556639 CALM3P0DP25 149 aa16.05■□□□□ 0.16
EFCAB11-212ENST00000556639 PKN1Q16512 942 aa16.05■□□□□ 0.16
EFCAB11-212ENST00000556639 MAD2L2Q9UI95 211 aa16.05■□□□□ 0.16
EFCAB11-212ENST00000556639 KCNJ14Q9UNX9 436 aa16.05■□□□□ 0.16
EFCAB11-212ENST00000556639 ATP6V1DQ9Y5K8 247 aa16.05■□□□□ 0.16
EFCAB11-212ENST00000556639 ATRNL1Q5VV63 1379 aa16.05■□□□□ 0.16
EFCAB11-212ENST00000556639 STK36Q9NRP7 1315 aa16.05■□□□□ 0.16
EFCAB11-212ENST00000556639 ZNF280AP59817 542 aaPredicted RBP16.05■□□□□ 0.16
EFCAB11-212ENST00000556639 CLIP2Q9UDT6 1046 aa16.05■□□□□ 0.16
EFCAB11-212ENST00000556639 CNTNAP5Q8WYK1 1306 aa16.04■□□□□ 0.16
EFCAB11-212ENST00000556639 PDIA4P13667 645 aaKnown RBP16.04■□□□□ 0.16
EFCAB11-212ENST00000556639 NOVP48745 357 aa16.04■□□□□ 0.16
EFCAB11-212ENST00000556639 CEBPZQ03701 1054 aaKnown RBP16.04■□□□□ 0.16
EFCAB11-212ENST00000556639 USP17L2Q6R6M4 530 aa16.04■□□□□ 0.16
EFCAB11-212ENST00000556639 TRIM22Q8IYM9 498 aa16.04■□□□□ 0.16
EFCAB11-212ENST00000556639 FAM151AQ8WW52 585 aa16.04■□□□□ 0.16
EFCAB11-212ENST00000556639 RBM28Q9NW13 759 aaKnown RBP16.04■□□□□ 0.16
EFCAB11-212ENST00000556639 DDX49Q9Y6V7 483 aaKnown RBP16.04■□□□□ 0.16
EFCAB11-212ENST00000556639 PLIN4Q96Q06 1357 aa16.04■□□□□ 0.16
EFCAB11-212ENST00000556639 MYH6P13533 1939 aa16.04■□□□□ 0.16
EFCAB11-212ENST00000556639 SBF1O95248 1867 aa16.03■□□□□ 0.16
EFCAB11-212ENST00000556639 LMNB1P20700 586 aa16.03■□□□□ 0.16
EFCAB11-212ENST00000556639 ATP2B2Q01814 1243 aa16.03■□□□□ 0.16
EFCAB11-212ENST00000556639 GRM4Q14833 912 aa16.03■□□□□ 0.16
EFCAB11-212ENST00000556639 CERKLQ49MI3 558 aaPredicted RBP16.03■□□□□ 0.16
EFCAB11-212ENST00000556639 CCDC178Q5BJE1 867 aa16.03■□□□□ 0.16
EFCAB11-212ENST00000556639 TATDN1Q6P1N9 297 aa16.03■□□□□ 0.16
EFCAB11-212ENST00000556639 FOXP4Q8IVH2 680 aaPredicted RBP16.03■□□□□ 0.16
EFCAB11-212ENST00000556639 USP17L5A8MUK1 530 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms