RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 EIF6P56537 245 aaKnown RBP11.79□□□□□ -0.52
GTF2A1-204ENST00000556268 NFE2L2Q16236 605 aa11.79□□□□□ -0.52
GTF2A1-204ENST00000556268 CLP1Q92989 425 aaKnown RBP11.79□□□□□ -0.52
GTF2A1-204ENST00000556268 RBM17Q96I25 401 aaKnown RBP11.79□□□□□ -0.52
GTF2A1-204ENST00000556268 DDX21Q9NR30 783 aaKnown RBP eCLIP11.79□□□□□ -0.525e-8■□□□□ 8.1
GTF2A1-204ENST00000556268 LRFN2Q9ULH4 789 aa11.79□□□□□ -0.52
GTF2A1-204ENST00000556268 ABCC12Q96J65 1359 aa11.79□□□□□ -0.52
GTF2A1-204ENST00000556268 IBTKQ9P2D0 1353 aaPredicted RBP11.79□□□□□ -0.52
GTF2A1-204ENST00000556268 CACNA1SQ13698 1873 aa11.78□□□□□ -0.52
GTF2A1-204ENST00000556268 ADAMTSL1Q8N6G6 1762 aa11.78□□□□□ -0.52
GTF2A1-204ENST00000556268 NTSR2O95665 410 aa11.78□□□□□ -0.52
GTF2A1-204ENST00000556268 GPTP24298 496 aa11.78□□□□□ -0.52
GTF2A1-204ENST00000556268 EPS15P42566 896 aa11.78□□□□□ -0.52
GTF2A1-204ENST00000556268 CST9Q5W186 159 aa11.78□□□□□ -0.52
GTF2A1-204ENST00000556268 USP50Q70EL3 339 aaPredicted RBP11.78□□□□□ -0.52
GTF2A1-204ENST00000556268 BTBD6Q96KE9 485 aa11.78□□□□□ -0.52
GTF2A1-204ENST00000556268 MKNK1Q9BUB5 465 aa11.78□□□□□ -0.52
GTF2A1-204ENST00000556268 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.78□□□□□ -0.528e-14■■■■■ 76.9
GTF2A1-204ENST00000556268 WDR33Q9C0J8 1336 aaKnown RBP11.78□□□□□ -0.52
GTF2A1-204ENST00000556268 HOXB4P17483 251 aaPredicted RBP11.77□□□□□ -0.53
GTF2A1-204ENST00000556268 LBX1P52954 281 aa11.77□□□□□ -0.53
GTF2A1-204ENST00000556268 MAP2K1Q02750 393 aaPredicted RBP11.77□□□□□ -0.53
GTF2A1-204ENST00000556268 KIF6Q6ZMV9 814 aa11.77□□□□□ -0.53
GTF2A1-204ENST00000556268 BEND7Q8N7W2 519 aaPredicted RBP11.77□□□□□ -0.53
GTF2A1-204ENST00000556268 RPGRQ92834 1020 aaKnown RBP11.77□□□□□ -0.53
GTF2A1-204ENST00000556268 THUMPD2Q9BTF0 503 aaKnown RBP11.77□□□□□ -0.53
GTF2A1-204ENST00000556268 RTFDC1Q9BY42 306 aaPredicted RBP11.77□□□□□ -0.53
GTF2A1-204ENST00000556268 PNNQ9H307 717 aaKnown RBP11.77□□□□□ -0.53
GTF2A1-204ENST00000556268 BABAM1Q9NWV8 329 aa11.77□□□□□ -0.53
GTF2A1-204ENST00000556268 PGAP2Q9UHJ9 254 aa11.77□□□□□ -0.53
GTF2A1-204ENST00000556268 ATP6V0A2Q9Y487 856 aa11.77□□□□□ -0.53
GTF2A1-204ENST00000556268 COL4A5P29400 1685 aa11.76□□□□□ -0.53
GTF2A1-204ENST00000556268 PHF20L1A8MW92 1017 aa11.76□□□□□ -0.53
GTF2A1-204ENST00000556268 SIN3BO75182 1162 aa11.76□□□□□ -0.53
GTF2A1-204ENST00000556268 BBOX1O75936 387 aa11.76□□□□□ -0.53
GTF2A1-204ENST00000556268 NEFMP07197 916 aa11.76□□□□□ -0.53
GTF2A1-204ENST00000556268 HSPA8P11142 646 aaKnown RBP11.76□□□□□ -0.53
GTF2A1-204ENST00000556268 MYL6BP14649 208 aa11.76□□□□□ -0.53
GTF2A1-204ENST00000556268 IDH3AP50213 366 aa11.76□□□□□ -0.53
GTF2A1-204ENST00000556268 C11orf91Q3C1V1 193 aa11.76□□□□□ -0.53
GTF2A1-204ENST00000556268 PARP10Q53GL7 1025 aa11.76□□□□□ -0.53
GTF2A1-204ENST00000556268 COX20Q5RI15 118 aa11.76□□□□□ -0.53
GTF2A1-204ENST00000556268 KANK3Q6NY19 840 aa11.76□□□□□ -0.53
GTF2A1-204ENST00000556268 CHSY3Q70JA7 882 aa11.76□□□□□ -0.53
GTF2A1-204ENST00000556268 PPP1R42Q7Z4L9 355 aa11.76□□□□□ -0.53
GTF2A1-204ENST00000556268 SLC51AQ86UW1 340 aa11.76□□□□□ -0.53
GTF2A1-204ENST00000556268 GDF11O95390 407 aa11.75□□□□□ -0.53
GTF2A1-204ENST00000556268 GRNP28799 593 aaKnown RBP11.75□□□□□ -0.53
GTF2A1-204ENST00000556268 FMR1Q06787 632 aaKnown RBP eCLIP11.75□□□□□ -0.53
GTF2A1-204ENST00000556268 CXCL9Q07325 125 aa11.75□□□□□ -0.53
GTF2A1-204ENST00000556268 CAPN12Q6ZSI9 719 aa11.75□□□□□ -0.53
GTF2A1-204ENST00000556268 SP8Q8IXZ3 490 aa11.75□□□□□ -0.53
GTF2A1-204ENST00000556268 MDFIQ99750 246 aa11.75□□□□□ -0.53
GTF2A1-204ENST00000556268 INPP5BP32019 993 aa11.74□□□□□ -0.53
GTF2A1-204ENST00000556268 DGKGP49619 791 aa11.74□□□□□ -0.53
GTF2A1-204ENST00000556268 TMEM151AQ8N4L1 468 aa11.74□□□□□ -0.53
GTF2A1-204ENST00000556268 COL26A1Q96A83 441 aa11.74□□□□□ -0.53
GTF2A1-204ENST00000556268 UTP14AQ9BVJ6 771 aaKnown RBP11.74□□□□□ -0.53
GTF2A1-204ENST00000556268 SAP130Q9H0E3 1048 aa11.74□□□□□ -0.53
GTF2A1-204ENST00000556268 GPRC5DQ9NZD1 345 aa11.74□□□□□ -0.53
GTF2A1-204ENST00000556268 MKL2Q9ULH7 1088 aa11.74□□□□□ -0.53
GTF2A1-204ENST00000556268 ZNRF3Q9ULT6 936 aa11.74□□□□□ -0.53
GTF2A1-204ENST00000556268 NUP98P52948 1817 aa11.74□□□□□ -0.53
GTF2A1-204ENST00000556268 ELOA3CA0A087WX78 387 aaPredicted RBP11.73□□□□□ -0.53
GTF2A1-204ENST00000556268 ELOA3DA6NLF2 546 aaPredicted RBP11.73□□□□□ -0.53
GTF2A1-204ENST00000556268 TCERG1O14776 1098 aaKnown RBP11.73□□□□□ -0.53
GTF2A1-204ENST00000556268 MICAL2O94851 1124 aa11.73□□□□□ -0.53
GTF2A1-204ENST00000556268 MAP2K2P36507 400 aa11.73□□□□□ -0.53
GTF2A1-204ENST00000556268 PROSER3Q2NL68 480 aa11.73□□□□□ -0.53
GTF2A1-204ENST00000556268 ELOA3BQ3SY89 546 aa11.73□□□□□ -0.53
GTF2A1-204ENST00000556268 NIM1KQ8IY84 436 aa11.73□□□□□ -0.53
GTF2A1-204ENST00000556268 ELOA3Q8NG57 546 aa11.73□□□□□ -0.53
GTF2A1-204ENST00000556268 TNFRSF25Q93038 417 aa11.73□□□□□ -0.53
GTF2A1-204ENST00000556268 BHMTQ93088 406 aa11.73□□□□□ -0.53
GTF2A1-204ENST00000556268 CAPNS2Q96L46 248 aa11.73□□□□□ -0.53
GTF2A1-204ENST00000556268 GPR101Q96P66 508 aaPredicted RBP11.73□□□□□ -0.53
GTF2A1-204ENST00000556268 ADARB2Q9NS39 739 aaKnown RBP11.73□□□□□ -0.53
GTF2A1-204ENST00000556268 ABT1Q9ULW3 272 aaKnown RBP11.73□□□□□ -0.53
GTF2A1-204ENST00000556268 LTBP1Q14766 1721 aa11.72□□□□□ -0.53
GTF2A1-204ENST00000556268 TRAF5O00463 557 aa11.72□□□□□ -0.53
GTF2A1-204ENST00000556268 PPIP5K2O43314 1243 aa11.72□□□□□ -0.53
GTF2A1-204ENST00000556268 EPB42P16452 691 aa11.72□□□□□ -0.53
GTF2A1-204ENST00000556268 ATP2B4P23634 1241 aa11.72□□□□□ -0.53
GTF2A1-204ENST00000556268 ECE1P42892 770 aa11.72□□□□□ -0.53
GTF2A1-204ENST00000556268 ARSDP51689 593 aa11.72□□□□□ -0.53
GTF2A1-204ENST00000556268 TCIRG1Q13488 830 aa11.72□□□□□ -0.53
GTF2A1-204ENST00000556268 C16orf46Q6P387 395 aa11.72□□□□□ -0.53
GTF2A1-204ENST00000556268 ERICH6Q7L0X2 663 aa11.72□□□□□ -0.53
GTF2A1-204ENST00000556268 NLRP10Q86W26 655 aa11.72□□□□□ -0.53
GTF2A1-204ENST00000556268 SUPT20HQ8NEM7 779 aa11.72□□□□□ -0.53
GTF2A1-204ENST00000556268 IFT43Q96FT9 208 aa11.72□□□□□ -0.53
GTF2A1-204ENST00000556268 ABHD8Q96I13 439 aa11.72□□□□□ -0.53
GTF2A1-204ENST00000556268 HHIPL1Q96JK4 782 aa11.72□□□□□ -0.53
GTF2A1-204ENST00000556268 TSPYL4Q9UJ04 414 aa11.72□□□□□ -0.53
GTF2A1-204ENST00000556268 ABCC4O15439 1325 aa11.71□□□□□ -0.53
GTF2A1-204ENST00000556268 ADARB2-AS1A8MUL3 147 aa11.71□□□□□ -0.53
GTF2A1-204ENST00000556268 EIF2S2P20042 333 aaKnown RBP11.71□□□□□ -0.53
GTF2A1-204ENST00000556268 RIPK4P57078 832 aa11.71□□□□□ -0.53
GTF2A1-204ENST00000556268 KIAA2012Q0VF49 1180 aa11.71□□□□□ -0.53
GTF2A1-204ENST00000556268 AOC3Q16853 763 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms