RNA–Protein interactions for RNA: ENST00000555778.1

SDR39U1-214, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 608 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-214ENST00000555778 UBXN2AP68543 259 aa16.59■□□□□ 0.25
SDR39U1-214ENST00000555778 USP17L2Q6R6M4 530 aa16.59■□□□□ 0.25
SDR39U1-214ENST00000555778 PUS7LQ9H0K6 701 aaKnown RBP16.59■□□□□ 0.25
SDR39U1-214ENST00000555778 TRIM32Q13049 653 aa16.58■□□□□ 0.24
SDR39U1-214ENST00000555778 TMED8Q6PL24 325 aaPredicted RBP16.58■□□□□ 0.24
SDR39U1-214ENST00000555778 POTEEQ6S8J3 1075 aa16.58■□□□□ 0.24
SDR39U1-214ENST00000555778 STK11IPQ8N1F8 1099 aa16.58■□□□□ 0.24
SDR39U1-214ENST00000555778 PORCNQ9H237 461 aa16.58■□□□□ 0.24
SDR39U1-214ENST00000555778 DCTPP1Q9H773 170 aa16.58■□□□□ 0.24
SDR39U1-214ENST00000555778 CABP5Q9NP86 173 aa16.58■□□□□ 0.24
SDR39U1-214ENST00000555778 GINM1Q9NU53 330 aa16.58■□□□□ 0.24
SDR39U1-214ENST00000555778 MORF4L1Q9UBU8 362 aa16.58■□□□□ 0.24
SDR39U1-214ENST00000555778 PARP14Q460N5 1801 aa16.58■□□□□ 0.24
SDR39U1-214ENST00000555778 CEP290O15078 2479 aa16.58■□□□□ 0.24
SDR39U1-214ENST00000555778 AKR1B1P15121 316 aa16.57■□□□□ 0.24
SDR39U1-214ENST00000555778 HOXA7P31268 230 aaPredicted RBP16.57■□□□□ 0.24
SDR39U1-214ENST00000555778 GPATCH3Q96I76 525 aa16.57■□□□□ 0.24
SDR39U1-214ENST00000555778 RPAP3Q9H6T3 665 aaPredicted RBP16.57■□□□□ 0.24
SDR39U1-214ENST00000555778 SLC4A4Q9Y6R1 1079 aa16.57■□□□□ 0.24
SDR39U1-214ENST00000555778 A0A1W2PRG0 241 aa16.56■□□□□ 0.24
SDR39U1-214ENST00000555778 ERVK-9P63128 1117 aa16.56■□□□□ 0.24
SDR39U1-214ENST00000555778 ERVK-24P63145 666 aa16.56■□□□□ 0.24
SDR39U1-214ENST00000555778 IRF5Q13568 498 aa16.56■□□□□ 0.24
SDR39U1-214ENST00000555778 U2AF1L4Q8WU68 220 aaKnown RBP16.56■□□□□ 0.24
SDR39U1-214ENST00000555778 C12orf42Q96LP6 360 aa16.56■□□□□ 0.24
SDR39U1-214ENST00000555778 KIAA1683Q9H0B3 1180 aa16.56■□□□□ 0.24
SDR39U1-214ENST00000555778 RBPJLQ9UBG7 517 aa16.56■□□□□ 0.24
SDR39U1-214ENST00000555778 RLFQ13129 1914 aa16.56■□□□□ 0.24
SDR39U1-214ENST00000555778 FRMPD3Q5JV73 1810 aa16.56■□□□□ 0.24
SDR39U1-214ENST00000555778 ALPK3Q96L96 1907 aa16.55■□□□□ 0.24
SDR39U1-214ENST00000555778 GREB1LQ9C091 1923 aaPredicted RBP16.55■□□□□ 0.24
SDR39U1-214ENST00000555778 USP17L12C9JPN9 530 aa16.55■□□□□ 0.24
SDR39U1-214ENST00000555778 USP17L21D6R901 530 aa16.55■□□□□ 0.24
SDR39U1-214ENST00000555778 CNMDO75829 334 aa16.55■□□□□ 0.24
SDR39U1-214ENST00000555778 CYP2B6P20813 491 aa16.55■□□□□ 0.24
SDR39U1-214ENST00000555778 GJA8P48165 433 aa16.55■□□□□ 0.24
SDR39U1-214ENST00000555778 UBE3CQ15386 1083 aa16.55■□□□□ 0.24
SDR39U1-214ENST00000555778 Q3C1V9 767 aa16.55■□□□□ 0.24
SDR39U1-214ENST00000555778 KIAA1755Q5JYT7 1200 aa16.55■□□□□ 0.24
SDR39U1-214ENST00000555778 WDR78Q5VTH9 848 aa16.55■□□□□ 0.24
SDR39U1-214ENST00000555778 SAMD1Q6SPF0 538 aaPredicted RBP16.55■□□□□ 0.24
SDR39U1-214ENST00000555778 GPRC5AQ8NFJ5 357 aa16.55■□□□□ 0.24
SDR39U1-214ENST00000555778 TRIB2Q92519 343 aa16.55■□□□□ 0.24
SDR39U1-214ENST00000555778 DEFB118Q96PH6 123 aa16.55■□□□□ 0.24
SDR39U1-214ENST00000555778 TANGO6Q9C0B7 1094 aa16.55■□□□□ 0.24
SDR39U1-214ENST00000555778 COL11A1P12107 1806 aaPredicted RBP16.54■□□□□ 0.24
SDR39U1-214ENST00000555778 USP17L15C9J2P7 530 aa16.54■□□□□ 0.24
SDR39U1-214ENST00000555778 USP17L13C9JLJ4 530 aa16.54■□□□□ 0.24
SDR39U1-214ENST00000555778 USP17L11C9JVI0 530 aa16.54■□□□□ 0.24
SDR39U1-214ENST00000555778 USP17L18D6R9N7 530 aa16.54■□□□□ 0.24
SDR39U1-214ENST00000555778 USP17L22D6RA61 530 aa16.54■□□□□ 0.24
SDR39U1-214ENST00000555778 USP17L17D6RBQ6 530 aa16.54■□□□□ 0.24
SDR39U1-214ENST00000555778 USP17L19D6RCP7 530 aa16.54■□□□□ 0.24
SDR39U1-214ENST00000555778 USP17L20D6RJB6 530 aa16.54■□□□□ 0.24
SDR39U1-214ENST00000555778 M0R2C6 588 aa16.54■□□□□ 0.24
SDR39U1-214ENST00000555778 FARP2O94887 1054 aaPredicted RBP16.54■□□□□ 0.24
SDR39U1-214ENST00000555778 GJB1P08034 283 aa16.54■□□□□ 0.24
SDR39U1-214ENST00000555778 USP14P54578 494 aa16.54■□□□□ 0.24
SDR39U1-214ENST00000555778 ICA1Q05084 483 aa16.54■□□□□ 0.24
SDR39U1-214ENST00000555778 USP17L24Q0WX57 530 aa16.54■□□□□ 0.24
SDR39U1-214ENST00000555778 CCAR1Q8IX12 1150 aaKnown RBP16.54■□□□□ 0.24
SDR39U1-214ENST00000555778 SPICE1Q8N0Z3 855 aa16.54■□□□□ 0.24
SDR39U1-214ENST00000555778 KBTBD3Q8NAB2 608 aa16.54■□□□□ 0.24
SDR39U1-214ENST00000555778 OSBP2Q969R2 916 aa16.54■□□□□ 0.24
SDR39U1-214ENST00000555778 CWC22Q9HCG8 908 aaKnown RBP16.54■□□□□ 0.24
SDR39U1-214ENST00000555778 SPDYE16A6NNV3 312 aaPredicted RBP16.53■□□□□ 0.24
SDR39U1-214ENST00000555778 HMGCRP04035 888 aa16.53■□□□□ 0.24
SDR39U1-214ENST00000555778 ATP2B2Q01814 1243 aa16.53■□□□□ 0.24
SDR39U1-214ENST00000555778 CCL14Q16627 93 aa16.53■□□□□ 0.24
SDR39U1-214ENST00000555778 ZSCAN25Q6NSZ9 544 aa16.53■□□□□ 0.24
SDR39U1-214ENST00000555778 TMEM179Q6ZVK1 233 aa16.53■□□□□ 0.24
SDR39U1-214ENST00000555778 GPR142Q7Z601 462 aa16.53■□□□□ 0.24
SDR39U1-214ENST00000555778 PXYLP1Q8TE99 480 aa16.53■□□□□ 0.24
SDR39U1-214ENST00000555778 DDRGK1Q96HY6 314 aa16.53■□□□□ 0.24
SDR39U1-214ENST00000555778 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.53■□□□□ 0.24
SDR39U1-214ENST00000555778 EPB41L4AQ9HCS5 686 aaPredicted RBP16.53■□□□□ 0.24
SDR39U1-214ENST00000555778 ATP8A2Q9NTI2 1148 aa16.53■□□□□ 0.24
SDR39U1-214ENST00000555778 GJD2Q9UKL4 321 aa16.53■□□□□ 0.24
SDR39U1-214ENST00000555778 CDK8P49336 464 aa16.52■□□□□ 0.24
SDR39U1-214ENST00000555778 C12orf60Q5U649 245 aa16.52■□□□□ 0.24
SDR39U1-214ENST00000555778 CTR9Q6PD62 1173 aa16.52■□□□□ 0.24
SDR39U1-214ENST00000555778 C16orf86Q6ZW13 317 aa16.52■□□□□ 0.24
SDR39U1-214ENST00000555778 AMOTL1Q8IY63 956 aa16.52■□□□□ 0.24
SDR39U1-214ENST00000555778 PI4K2BQ8TCG2 481 aa16.52■□□□□ 0.24
SDR39U1-214ENST00000555778 DIS3LQ8TF46 1054 aaKnown RBP16.52■□□□□ 0.24
SDR39U1-214ENST00000555778 BTBD7Q9P203 1132 aa16.52■□□□□ 0.24
SDR39U1-214ENST00000555778 SWAP70Q9UH65 585 aa16.52■□□□□ 0.24
SDR39U1-214ENST00000555778 MYH4Q9Y623 1939 aa16.51■□□□□ 0.23
SDR39U1-214ENST00000555778 GPAA1O43292 621 aa16.51■□□□□ 0.23
SDR39U1-214ENST00000555778 RAD21O60216 631 aa16.51■□□□□ 0.23
SDR39U1-214ENST00000555778 SLC34A2O95436 690 aa16.51■□□□□ 0.23
SDR39U1-214ENST00000555778 CATSPERGQ6ZRH7 1159 aa16.51■□□□□ 0.23
SDR39U1-214ENST00000555778 NKX2-3Q8TAU0 364 aa16.51■□□□□ 0.23
SDR39U1-214ENST00000555778 SOCS4Q8WXH5 440 aa16.51■□□□□ 0.23
SDR39U1-214ENST00000555778 APPBP2Q92624 585 aa16.51■□□□□ 0.23
SDR39U1-214ENST00000555778 STRBPQ96SI9 672 aaKnown RBP16.51■□□□□ 0.23
SDR39U1-214ENST00000555778 SEC62Q99442 399 aaKnown RBP16.51■□□□□ 0.23
SDR39U1-214ENST00000555778 PAK6Q9NQU5 681 aaPredicted RBP16.51■□□□□ 0.23
SDR39U1-214ENST00000555778 RANBP2P49792 3224 aaKnown RBP16.5■□□□□ 0.23
SDR39U1-214ENST00000555778 H0YGN5 161 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms