RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 SENP2Q9HC62 589 aa27.21■■□□□ 1.95
STRN3-207ENST00000555358 ANGEL1Q9UNK9 670 aaKnown RBP27.21■■□□□ 1.95
STRN3-207ENST00000555358 RRP12Q5JTH9 1297 aaKnown RBP27.21■■□□□ 1.95
STRN3-207ENST00000555358 DPP8Q6V1X1 898 aaPredicted RBP27.21■■□□□ 1.95
STRN3-207ENST00000555358 L2HGDHQ9H9P8 463 aa27.21■■□□□ 1.95
STRN3-207ENST00000555358 EVX2Q03828 476 aa27.2■■□□□ 1.95
STRN3-207ENST00000555358 ALG1Q9BT22 464 aa27.2■■□□□ 1.95
STRN3-207ENST00000555358 TOMM22Q9NS69 142 aa27.2■■□□□ 1.95
STRN3-207ENST00000555358 SH2B2O14492 632 aaPredicted RBP27.2■■□□□ 1.94
STRN3-207ENST00000555358 FANCCQ00597 558 aa27.2■■□□□ 1.94
STRN3-207ENST00000555358 DHX8Q14562 1220 aaKnown RBP27.2■■□□□ 1.94
STRN3-207ENST00000555358 PTPAQ15257 358 aa27.2■■□□□ 1.94
STRN3-207ENST00000555358 PPP6R2O75170 966 aa27.19■■□□□ 1.94
STRN3-207ENST00000555358 LMOD1P29536 600 aaPredicted RBP27.19■■□□□ 1.94
STRN3-207ENST00000555358 SYKP43405 635 aa27.19■■□□□ 1.94
STRN3-207ENST00000555358 ELF2Q15723 593 aa27.19■■□□□ 1.94
STRN3-207ENST00000555358 SHC4Q6S5L8 630 aa27.19■■□□□ 1.94
STRN3-207ENST00000555358 CRNKL1Q9BZJ0 848 aaKnown RBP27.19■■□□□ 1.94
STRN3-207ENST00000555358 FAM237AA0A1B0GTK4 181 aa27.18■■□□□ 1.94
STRN3-207ENST00000555358 ATP1A3P13637 1013 aa27.18■■□□□ 1.94
STRN3-207ENST00000555358 METAP2P50579 478 aaKnown RBP eCLIP27.18■■□□□ 1.94
STRN3-207ENST00000555358 MFSD14BQ5SR56 506 aa27.18■■□□□ 1.94
STRN3-207ENST00000555358 KRT40Q6A162 431 aa27.18■■□□□ 1.94
STRN3-207ENST00000555358 IGDCC4Q8TDY8 1250 aa27.18■■□□□ 1.94
STRN3-207ENST00000555358 DCP1AQ9NPI6 582 aaPredicted RBP27.18■■□□□ 1.94
STRN3-207ENST00000555358 ZNF219Q9P2Y4 722 aaPredicted RBP27.18■■□□□ 1.94
STRN3-207ENST00000555358 ISM2Q6H9L7 571 aa27.18■■□□□ 1.94
STRN3-207ENST00000555358 CTR9Q6PD62 1173 aa27.18■■□□□ 1.94
STRN3-207ENST00000555358 FBXO38Q6PIJ6 1188 aa27.18■■□□□ 1.94
STRN3-207ENST00000555358 MAP3K14Q99558 947 aa27.18■■□□□ 1.94
STRN3-207ENST00000555358 KRT23Q9C075 422 aa27.18■■□□□ 1.94
STRN3-207ENST00000555358 CNNM2Q9H8M5 875 aa27.18■■□□□ 1.94
STRN3-207ENST00000555358 ANAPC4Q9UJX5 808 aa27.18■■□□□ 1.94
STRN3-207ENST00000555358 USP17L12C9JPN9 530 aa27.17■■□□□ 1.94
STRN3-207ENST00000555358 USP17L21D6R901 530 aa27.17■■□□□ 1.94
STRN3-207ENST00000555358 KIF20AO95235 890 aa27.17■■□□□ 1.94
STRN3-207ENST00000555358 STYK1Q6J9G0 422 aa27.17■■□□□ 1.94
STRN3-207ENST00000555358 ZC3H12CQ9C0D7 883 aaKnown RBP27.17■■□□□ 1.94
STRN3-207ENST00000555358 CDC27P30260 824 aa27.17■■□□□ 1.94
STRN3-207ENST00000555358 GTF2IP78347 998 aa27.17■■□□□ 1.94
STRN3-207ENST00000555358 DOK7Q18PE1 504 aa27.16■■□□□ 1.94
STRN3-207ENST00000555358 CCDC93Q567U6 631 aa27.16■■□□□ 1.94
STRN3-207ENST00000555358 TMED8Q6PL24 325 aaPredicted RBP27.16■■□□□ 1.94
STRN3-207ENST00000555358 APOA5Q6Q788 366 aa27.16■■□□□ 1.94
STRN3-207ENST00000555358 TMEM87BQ96K49 555 aa27.16■■□□□ 1.94
STRN3-207ENST00000555358 ZKSCAN3Q9BRR0 538 aa27.16■■□□□ 1.94
STRN3-207ENST00000555358 FAM53CQ9NYF3 392 aa27.16■■□□□ 1.94
STRN3-207ENST00000555358 CDKL5O76039 1030 aa27.16■■□□□ 1.94
STRN3-207ENST00000555358 RXRAP19793 462 aa27.16■■□□□ 1.94
STRN3-207ENST00000555358 COA1Q9GZY4 146 aa27.16■■□□□ 1.94
STRN3-207ENST00000555358 TMX4Q9H1E5 349 aaPredicted RBP27.16■■□□□ 1.94
STRN3-207ENST00000555358 LY9Q9HBG7 655 aa27.16■■□□□ 1.94
STRN3-207ENST00000555358 TMEM67Q5HYA8 995 aa27.15■■□□□ 1.94
STRN3-207ENST00000555358 RESP18Q5W5W9 173 aa27.15■■□□□ 1.94
STRN3-207ENST00000555358 SYT10Q6XYQ8 523 aa27.15■■□□□ 1.94
STRN3-207ENST00000555358 SH3RF3Q8TEJ3 882 aaPredicted RBP27.15■■□□□ 1.94
STRN3-207ENST00000555358 GSTO1P78417 241 aa27.14■■□□□ 1.94
STRN3-207ENST00000555358 NTRK3Q16288 839 aa27.14■■□□□ 1.94
STRN3-207ENST00000555358 JMYQ8N9B5 988 aa27.14■■□□□ 1.94
STRN3-207ENST00000555358 PHKBQ93100 1093 aa27.14■■□□□ 1.94
STRN3-207ENST00000555358 RNF41Q9H4P4 317 aaPredicted RBP27.14■■□□□ 1.94
STRN3-207ENST00000555358 FAM205AQ6ZU69 1335 aa27.14■■□□□ 1.94
STRN3-207ENST00000555358 IFIT3O14879 490 aaKnown RBP27.14■■□□□ 1.94
STRN3-207ENST00000555358 GABPB1Q06547 395 aaPredicted RBP27.14■■□□□ 1.94
STRN3-207ENST00000555358 PNOCQ13519 176 aa27.14■■□□□ 1.94
STRN3-207ENST00000555358 DPF2Q92785 391 aa27.14■■□□□ 1.94
STRN3-207ENST00000555358 ATP8A2Q9NTI2 1148 aa27.14■■□□□ 1.94
STRN3-207ENST00000555358 LAMB1P07942 1786 aa27.13■■□□□ 1.93
STRN3-207ENST00000555358 CYP2D6P10635 497 aa27.13■■□□□ 1.93
STRN3-207ENST00000555358 MYL5Q02045 173 aa27.13■■□□□ 1.93
STRN3-207ENST00000555358 SLC4A8Q2Y0W8 1093 aa27.13■■□□□ 1.93
STRN3-207ENST00000555358 RTFDC1Q9BY42 306 aaPredicted RBP27.13■■□□□ 1.93
STRN3-207ENST00000555358 TUBB4AP04350 444 aa27.13■■□□□ 1.93
STRN3-207ENST00000555358 NRDCO43847 1150 aa27.12■■□□□ 1.93
STRN3-207ENST00000555358 RANBP6O60518 1105 aaKnown RBP27.12■■□□□ 1.93
STRN3-207ENST00000555358 IGSF3O75054 1194 aa27.12■■□□□ 1.93
STRN3-207ENST00000555358 PRDM1O75626 825 aa27.12■■□□□ 1.93
STRN3-207ENST00000555358 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.12■■□□□ 1.93
STRN3-207ENST00000555358 FAM217BQ9NTX9 383 aaPredicted RBP27.12■■□□□ 1.93
STRN3-207ENST00000555358 CDK5RAP2Q96SN8 1893 aa27.12■■□□□ 1.93
STRN3-207ENST00000555358 METTL16Q86W50 562 aaKnown RBP27.12■■□□□ 1.93
STRN3-207ENST00000555358 MICU3Q86XE3 530 aa27.12■■□□□ 1.93
STRN3-207ENST00000555358 TBC1D22AQ8WUA7 517 aa27.12■■□□□ 1.93
STRN3-207ENST00000555358 CLIC6Q96NY7 704 aa27.12■■□□□ 1.93
STRN3-207ENST00000555358 MYL10Q9BUA6 226 aa27.12■■□□□ 1.93
STRN3-207ENST00000555358 TMX1Q9H3N1 280 aa27.12■■□□□ 1.93
STRN3-207ENST00000555358 CPLX2Q6PUV4 134 aaKnown RBP27.11■■□□□ 1.93
STRN3-207ENST00000555358 NFXL1Q6ZNB6 911 aa27.11■■□□□ 1.93
STRN3-207ENST00000555358 LRRN4CLQ8ND94 238 aa27.11■■□□□ 1.93
STRN3-207ENST00000555358 MXD3Q9BW11 206 aa27.11■■□□□ 1.93
STRN3-207ENST00000555358 LDHCP07864 332 aa27.1■■□□□ 1.93
STRN3-207ENST00000555358 USP17L8P0C7I0 530 aa27.1■■□□□ 1.93
STRN3-207ENST00000555358 UBASH3AP57075 661 aa27.1■■□□□ 1.93
STRN3-207ENST00000555358 PPP4CP60510 307 aa27.1■■□□□ 1.93
STRN3-207ENST00000555358 SGMS1Q86VZ5 419 aa27.1■■□□□ 1.93
STRN3-207ENST00000555358 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.1■■□□□ 1.93
STRN3-207ENST00000555358 MKRN1Q9UHC7 482 aaKnown RBP27.1■■□□□ 1.93
STRN3-207ENST00000555358 ZBTB43O43298 467 aa27.1■■□□□ 1.93
STRN3-207ENST00000555358 BAG3O95817 575 aa27.1■■□□□ 1.93
STRN3-207ENST00000555358 BTDP43251 543 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms