RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 POTEEQ6S8J3 1075 aa13.42□□□□□ -0.26
ABCD4-221ENST00000554453 CATSPERGQ6ZRH7 1159 aa13.42□□□□□ -0.26
ABCD4-221ENST00000554453 ACER1Q8TDN7 264 aa13.42□□□□□ -0.26
ABCD4-221ENST00000554453 SHISA4Q96DD7 197 aa13.42□□□□□ -0.26
ABCD4-221ENST00000554453 ECHDC1Q9NTX5 307 aa13.42□□□□□ -0.26
ABCD4-221ENST00000554453 MBD4O95243 580 aa13.41□□□□□ -0.26
ABCD4-221ENST00000554453 INHAP05111 366 aa13.41□□□□□ -0.26
ABCD4-221ENST00000554453 SEPT2Q15019 361 aa13.41□□□□□ -0.26
ABCD4-221ENST00000554453 UBE2Q1Q7Z7E8 422 aa13.41□□□□□ -0.26
ABCD4-221ENST00000554453 U2AF1L4Q8WU68 220 aaKnown RBP13.41□□□□□ -0.26
ABCD4-221ENST00000554453 GCC1Q96CN9 775 aa13.41□□□□□ -0.26
ABCD4-221ENST00000554453 SWAP70Q9UH65 585 aa13.41□□□□□ -0.26
ABCD4-221ENST00000554453 RABGAP1Q9Y3P9 1069 aa13.41□□□□□ -0.26
ABCD4-221ENST00000554453 PCDHB15Q9Y5E8 787 aa13.41□□□□□ -0.26
ABCD4-221ENST00000554453 PEX10O60683 326 aa13.4□□□□□ -0.26
ABCD4-221ENST00000554453 CYP2D6P10635 497 aa13.4□□□□□ -0.26
ABCD4-221ENST00000554453 XRCC5P13010 732 aaKnown RBP13.4□□□□□ -0.26
ABCD4-221ENST00000554453 MAPK4P31152 587 aa13.4□□□□□ -0.26
ABCD4-221ENST00000554453 ERVK-9P63128 1117 aa13.4□□□□□ -0.26
ABCD4-221ENST00000554453 ERVK-24P63145 666 aa13.4□□□□□ -0.26
ABCD4-221ENST00000554453 EVX2Q03828 476 aa13.4□□□□□ -0.26
ABCD4-221ENST00000554453 C12orf60Q5U649 245 aa13.4□□□□□ -0.26
ABCD4-221ENST00000554453 LBX2Q6XYB7 198 aa13.4□□□□□ -0.26
ABCD4-221ENST00000554453 CCDC17Q96LX7 622 aa13.4□□□□□ -0.26
ABCD4-221ENST00000554453 FEZ1Q99689 392 aa13.4□□□□□ -0.26
ABCD4-221ENST00000554453 NUDT12Q9BQG2 462 aa13.4□□□□□ -0.26
ABCD4-221ENST00000554453 PUS7LQ9H0K6 701 aaKnown RBP13.4□□□□□ -0.26
ABCD4-221ENST00000554453 A0A1W2PRG0 241 aa13.39□□□□□ -0.27
ABCD4-221ENST00000554453 USP17L12C9JPN9 530 aa13.39□□□□□ -0.27
ABCD4-221ENST00000554453 USP17L21D6R901 530 aa13.39□□□□□ -0.27
ABCD4-221ENST00000554453 CHGBP05060 677 aa13.39□□□□□ -0.27
ABCD4-221ENST00000554453 ZYXQ15942 572 aaKnown RBP13.39□□□□□ -0.27
ABCD4-221ENST00000554453 SIAH1Q8IUQ4 282 aa13.39□□□□□ -0.27
ABCD4-221ENST00000554453 KBTBD3Q8NAB2 608 aa13.39□□□□□ -0.27
ABCD4-221ENST00000554453 USP6NLQ92738 828 aa13.39□□□□□ -0.27
ABCD4-221ENST00000554453 DYNLL2Q96FJ2 89 aa13.39□□□□□ -0.27
ABCD4-221ENST00000554453 CRISPLD2Q9H0B8 497 aa13.39□□□□□ -0.27
ABCD4-221ENST00000554453 PAK6Q9NQU5 681 aaPredicted RBP13.39□□□□□ -0.27
ABCD4-221ENST00000554453 HOXC10Q9NYD6 342 aa13.39□□□□□ -0.27
ABCD4-221ENST00000554453 BAZ2AQ9UIF9 1905 aaKnown RBP13.39□□□□□ -0.27
ABCD4-221ENST00000554453 MKI67P46013 3256 aaKnown RBP13.38□□□□□ -0.27
ABCD4-221ENST00000554453 MPHOSPH10O00566 681 aaKnown RBP13.38□□□□□ -0.27
ABCD4-221ENST00000554453 TFRCP02786 760 aaKnown RBP13.38□□□□□ -0.27
ABCD4-221ENST00000554453 HMGCRP04035 888 aa13.38□□□□□ -0.27
ABCD4-221ENST00000554453 VCAM1P19320 739 aa13.38□□□□□ -0.27
ABCD4-221ENST00000554453 CDK8P49336 464 aa13.38□□□□□ -0.27
ABCD4-221ENST00000554453 COG2Q14746 738 aa13.38□□□□□ -0.27
ABCD4-221ENST00000554453 CTR9Q6PD62 1173 aa13.38□□□□□ -0.27
ABCD4-221ENST00000554453 TMEM179Q6ZVK1 233 aa13.38□□□□□ -0.27
ABCD4-221ENST00000554453 SLC44A5Q8NCS7 719 aa13.38□□□□□ -0.27
ABCD4-221ENST00000554453 DDRGK1Q96HY6 314 aa13.38□□□□□ -0.27
ABCD4-221ENST00000554453 GPATCH3Q96I76 525 aa13.38□□□□□ -0.27
ABCD4-221ENST00000554453 STRBPQ96SI9 672 aaKnown RBP13.38□□□□□ -0.27
ABCD4-221ENST00000554453 PORCNQ9H237 461 aa13.38□□□□□ -0.27
ABCD4-221ENST00000554453 SLC4A4Q9Y6R1 1079 aa13.38□□□□□ -0.27
ABCD4-221ENST00000554453 RPTORQ8N122 1335 aa13.38□□□□□ -0.27
ABCD4-221ENST00000554453 CNMDO75829 334 aa13.37□□□□□ -0.27
ABCD4-221ENST00000554453 CYP2B6P20813 491 aa13.37□□□□□ -0.27
ABCD4-221ENST00000554453 CCNA1P78396 465 aa13.37□□□□□ -0.27
ABCD4-221ENST00000554453 MORN1Q5T089 497 aa13.37□□□□□ -0.27
ABCD4-221ENST00000554453 C16orf86Q6ZW13 317 aa13.37□□□□□ -0.27
ABCD4-221ENST00000554453 GPR142Q7Z601 462 aa13.37□□□□□ -0.27
ABCD4-221ENST00000554453 PLEKHH3Q7Z736 793 aa13.37□□□□□ -0.27
ABCD4-221ENST00000554453 CCAR1Q8IX12 1150 aaKnown RBP13.37□□□□□ -0.27
ABCD4-221ENST00000554453 AMOTL1Q8IY63 956 aa13.37□□□□□ -0.27
ABCD4-221ENST00000554453 TRMT44Q8IYL2 757 aaKnown RBP13.37□□□□□ -0.27
ABCD4-221ENST00000554453 SOCS4Q8WXH5 440 aa13.37□□□□□ -0.27
ABCD4-221ENST00000554453 DEFB118Q96PH6 123 aa13.37□□□□□ -0.27
ABCD4-221ENST00000554453 PAGR1Q9BTK6 254 aa13.37□□□□□ -0.27
ABCD4-221ENST00000554453 RPAP3Q9H6T3 665 aaPredicted RBP13.37□□□□□ -0.27
ABCD4-221ENST00000554453 TRIOBPQ9H2D6 2365 aa13.37□□□□□ -0.27
ABCD4-221ENST00000554453 MYH7P12883 1935 aa13.37□□□□□ -0.27
ABCD4-221ENST00000554453 CYP2D7A0A087X1C5 515 aa13.36□□□□□ -0.27
ABCD4-221ENST00000554453 SPDYE16A6NNV3 312 aaPredicted RBP13.36□□□□□ -0.27
ABCD4-221ENST00000554453 GSG1L2A8MUP6 293 aa13.36□□□□□ -0.27
ABCD4-221ENST00000554453 SMIM22K7EJ46 135 aa13.36□□□□□ -0.27
ABCD4-221ENST00000554453 RNF113AO15541 343 aaKnown RBP13.36□□□□□ -0.27
ABCD4-221ENST00000554453 AKR1B1P15121 316 aa13.36□□□□□ -0.27
ABCD4-221ENST00000554453 SBK1Q52WX2 424 aa13.36□□□□□ -0.27
ABCD4-221ENST00000554453 MAP3K21Q5TCX8 1036 aa13.36□□□□□ -0.27
ABCD4-221ENST00000554453 GIMAP6Q6P9H5 292 aa13.36□□□□□ -0.27
ABCD4-221ENST00000554453 TRIB2Q92519 343 aa13.36□□□□□ -0.27
ABCD4-221ENST00000554453 DPF3Q92784 378 aa13.36□□□□□ -0.27
ABCD4-221ENST00000554453 OSBP2Q969R2 916 aa13.36□□□□□ -0.27
ABCD4-221ENST00000554453 HTATIP2Q9BUP3 242 aa13.36□□□□□ -0.27
ABCD4-221ENST00000554453 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.36□□□□□ -0.279e-6■■□□□ 13.2
ABCD4-221ENST00000554453 HMX1Q9NP08 348 aaPredicted RBP13.36□□□□□ -0.27
ABCD4-221ENST00000554453 TMX2Q9Y320 296 aa13.36□□□□□ -0.27
ABCD4-221ENST00000554453 PLXNB2O15031 1838 aa13.35□□□□□ -0.27
ABCD4-221ENST00000554453 GLRX3O76003 335 aaKnown RBP13.35□□□□□ -0.27
ABCD4-221ENST00000554453 FARP2O94887 1054 aaPredicted RBP13.35□□□□□ -0.27
ABCD4-221ENST00000554453 ZFYP08048 801 aaPredicted RBP13.35□□□□□ -0.27
ABCD4-221ENST00000554453 RGS2P41220 211 aa13.35□□□□□ -0.27
ABCD4-221ENST00000554453 RRP1P56182 461 aaKnown RBP13.35□□□□□ -0.27
ABCD4-221ENST00000554453 TRIM32Q13049 653 aa13.35□□□□□ -0.27
ABCD4-221ENST00000554453 HABP4Q5JVS0 413 aaKnown RBP13.35□□□□□ -0.27
ABCD4-221ENST00000554453 APPBP2Q92624 585 aa13.35□□□□□ -0.27
ABCD4-221ENST00000554453 KANSL2Q9H9L4 492 aa13.35□□□□□ -0.27
ABCD4-221ENST00000554453 ARHGEF10LQ9HCE6 1279 aa13.35□□□□□ -0.27
ABCD4-221ENST00000554453 BTBD7Q9P203 1132 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms