RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 TFAP4Q01664 338 aa16.38■□□□□ 0.21
TUBB3-202ENST00000553656 ATP2B2Q01814 1243 aa16.38■□□□□ 0.21
TUBB3-202ENST00000553656 TRDNQ13061 729 aa16.38■□□□□ 0.21
TUBB3-202ENST00000553656 MTMR2Q13614 643 aa16.38■□□□□ 0.21
TUBB3-202ENST00000553656 FAM47AQ5JRC9 791 aa16.38■□□□□ 0.21
TUBB3-202ENST00000553656 PPP4R3BQ5MIZ7 849 aa16.38■□□□□ 0.21
TUBB3-202ENST00000553656 RNF20Q5VTR2 975 aa16.38■□□□□ 0.21
TUBB3-202ENST00000553656 GADL1Q6ZQY3 521 aa16.38■□□□□ 0.21
TUBB3-202ENST00000553656 ESR2Q92731 530 aa16.38■□□□□ 0.21
TUBB3-202ENST00000553656 CNNM2Q9H8M5 875 aa16.38■□□□□ 0.21
TUBB3-202ENST00000553656 A0A0G2JLL6 359 aaPredicted RBP16.37■□□□□ 0.21
TUBB3-202ENST00000553656 TESPA1A2RU30 521 aaPredicted RBP16.37■□□□□ 0.21
TUBB3-202ENST00000553656 ALDH1A1P00352 501 aa16.37■□□□□ 0.21
TUBB3-202ENST00000553656 FGRP09769 529 aa16.37■□□□□ 0.21
TUBB3-202ENST00000553656 GUCY1A2P33402 732 aa16.37■□□□□ 0.21
TUBB3-202ENST00000553656 USP14P54578 494 aa16.37■□□□□ 0.21
TUBB3-202ENST00000553656 BACE1P56817 501 aa16.37■□□□□ 0.21
TUBB3-202ENST00000553656 PRRT2Q7Z6L0 340 aaPredicted RBP16.37■□□□□ 0.21
TUBB3-202ENST00000553656 IFNL1Q8IU54 200 aa16.37■□□□□ 0.21
TUBB3-202ENST00000553656 NEDD1Q8NHV4 660 aa16.37■□□□□ 0.21
TUBB3-202ENST00000553656 BRI3BPQ8WY22 251 aa16.37■□□□□ 0.21
TUBB3-202ENST00000553656 KRT23Q9C075 422 aa16.37■□□□□ 0.21
TUBB3-202ENST00000553656 INCENPQ9NQS7 918 aa16.37■□□□□ 0.21
TUBB3-202ENST00000553656 PLIN4Q96Q06 1357 aa16.37■□□□□ 0.21
TUBB3-202ENST00000553656 PHIPQ8WWQ0 1821 aa16.36■□□□□ 0.21
TUBB3-202ENST00000553656 CA12O43570 354 aa16.36■□□□□ 0.21
TUBB3-202ENST00000553656 CYP21A2P08686 494 aa16.36■□□□□ 0.21
TUBB3-202ENST00000553656 HMGCS2P54868 508 aa16.36■□□□□ 0.21
TUBB3-202ENST00000553656 USP17L2Q6R6M4 530 aa16.36■□□□□ 0.21
TUBB3-202ENST00000553656 RALYLQ86SE5 291 aaKnown RBP16.36■□□□□ 0.21
TUBB3-202ENST00000553656 NBPF3Q9H094 633 aa16.36■□□□□ 0.21
TUBB3-202ENST00000553656 KIAA1683Q9H0B3 1180 aa16.36■□□□□ 0.21
TUBB3-202ENST00000553656 EEF2P13639 858 aaKnown RBP16.35■□□□□ 0.21
TUBB3-202ENST00000553656 PABPC4Q13310 644 aaKnown RBP eCLIP16.35■□□□□ 0.21
TUBB3-202ENST00000553656 ZYXQ15942 572 aaKnown RBP16.35■□□□□ 0.21
TUBB3-202ENST00000553656 CLEC10AQ8IUN9 316 aa16.35■□□□□ 0.21
TUBB3-202ENST00000553656 PROCA1Q8NCQ7 364 aaPredicted RBP16.35■□□□□ 0.21
TUBB3-202ENST00000553656 ACER1Q8TDN7 264 aa16.35■□□□□ 0.21
TUBB3-202ENST00000553656 CEP95Q96GE4 821 aa16.35■□□□□ 0.21
TUBB3-202ENST00000553656 ZCCHC17Q9NP64 241 aaKnown RBP16.35■□□□□ 0.21
TUBB3-202ENST00000553656 WBP1LQ9NX94 342 aa16.35■□□□□ 0.21
TUBB3-202ENST00000553656 NEDD4P46934 1319 aa16.35■□□□□ 0.21
TUBB3-202ENST00000553656 B4E1Z4 1266 aa16.34■□□□□ 0.21
TUBB3-202ENST00000553656 BTBD19C9JJ37 291 aa16.34■□□□□ 0.21
TUBB3-202ENST00000553656 IGF2BP3O00425 579 aaKnown RBP eCLIP16.34■□□□□ 0.21
TUBB3-202ENST00000553656 TTLL1O95922 423 aa16.34■□□□□ 0.21
TUBB3-202ENST00000553656 SH3D19Q5HYK7 790 aa16.34■□□□□ 0.21
TUBB3-202ENST00000553656 CREB3L3Q68CJ9 461 aa16.34■□□□□ 0.21
TUBB3-202ENST00000553656 ANKRD23Q86SG2 305 aa16.34■□□□□ 0.21
TUBB3-202ENST00000553656 IQCA1Q86XH1 822 aa16.34■□□□□ 0.21
TUBB3-202ENST00000553656 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.34■□□□□ 0.21
TUBB3-202ENST00000553656 SAGE1Q9NXZ1 904 aa16.34■□□□□ 0.21
TUBB3-202ENST00000553656 NYAP2Q9P242 653 aa16.34■□□□□ 0.21
TUBB3-202ENST00000553656 AGTPBP1Q9UPW5 1226 aa16.34■□□□□ 0.21
TUBB3-202ENST00000553656 SLC27A2O14975 620 aa16.33■□□□□ 0.2
TUBB3-202ENST00000553656 RAD21O60216 631 aa16.33■□□□□ 0.2
TUBB3-202ENST00000553656 KDM4AO75164 1064 aa16.33■□□□□ 0.2
TUBB3-202ENST00000553656 TRPA1O75762 1119 aa16.33■□□□□ 0.2
TUBB3-202ENST00000553656 HSPA1AP0DMV8 641 aaKnown RBP16.33■□□□□ 0.2
TUBB3-202ENST00000553656 HSPA1BP0DMV9 641 aaKnown RBP16.33■□□□□ 0.2
TUBB3-202ENST00000553656 ZKSCAN1P17029 563 aaPredicted RBP16.33■□□□□ 0.2
TUBB3-202ENST00000553656 FAM43AQ8N2R8 423 aa16.33■□□□□ 0.2
TUBB3-202ENST00000553656 NCOA7Q8NI08 942 aa16.33■□□□□ 0.2
TUBB3-202ENST00000553656 PTPN18Q99952 460 aa16.33■□□□□ 0.2
TUBB3-202ENST00000553656 GOPCQ9HD26 462 aa16.33■□□□□ 0.2
TUBB3-202ENST00000553656 RNF186Q9NXI6 227 aa16.33■□□□□ 0.2
TUBB3-202ENST00000553656 MTMR4Q9NYA4 1195 aa16.33■□□□□ 0.2
TUBB3-202ENST00000553656 CLIP2Q9UDT6 1046 aa16.33■□□□□ 0.2
TUBB3-202ENST00000553656 PNMA3Q9UL41 463 aa16.33■□□□□ 0.2
TUBB3-202ENST00000553656 STX8Q9UNK0 236 aa16.33■□□□□ 0.2
TUBB3-202ENST00000553656 TMX2Q9Y320 296 aa16.33■□□□□ 0.2
TUBB3-202ENST00000553656 TACC3Q9Y6A5 838 aa16.33■□□□□ 0.2
TUBB3-202ENST00000553656 GREB1LQ9C091 1923 aaPredicted RBP16.33■□□□□ 0.2
TUBB3-202ENST00000553656 IGKV6D-41A0A0C4DH26 115 aa16.32■□□□□ 0.2
TUBB3-202ENST00000553656 A0A1W2PRG0 241 aa16.32■□□□□ 0.2
TUBB3-202ENST00000553656 E7EWF7 191 aa16.32■□□□□ 0.2
TUBB3-202ENST00000553656 PDHXO00330 501 aa16.32■□□□□ 0.2
TUBB3-202ENST00000553656 EPB41L2O43491 1005 aaKnown RBP16.32■□□□□ 0.2
TUBB3-202ENST00000553656 PTPRFP10586 1907 aa16.32■□□□□ 0.2
TUBB3-202ENST00000553656 MCCP23508 829 aa16.32■□□□□ 0.2
TUBB3-202ENST00000553656 NECTIN1Q15223 517 aa16.32■□□□□ 0.2
TUBB3-202ENST00000553656 TAF1CQ15572 869 aaPredicted RBP16.32■□□□□ 0.2
TUBB3-202ENST00000553656 CCDC178Q5BJE1 867 aa16.32■□□□□ 0.2
TUBB3-202ENST00000553656 LPAR1Q92633 364 aa16.32■□□□□ 0.2
TUBB3-202ENST00000553656 C12orf42Q96LP6 360 aa16.32■□□□□ 0.2
TUBB3-202ENST00000553656 PARK7Q99497 189 aaKnown RBP16.32■□□□□ 0.2
TUBB3-202ENST00000553656 UBAC1Q9BSL1 405 aa16.32■□□□□ 0.2
TUBB3-202ENST00000553656 SLC45A1Q9Y2W3 748 aa16.32■□□□□ 0.2
TUBB3-202ENST00000553656 LOC285556D6RIA3 1793 aa16.31■□□□□ 0.2
TUBB3-202ENST00000553656 OSBPP22059 807 aa16.31■□□□□ 0.2
TUBB3-202ENST00000553656 IRX3P78415 501 aaPredicted RBP16.31■□□□□ 0.2
TUBB3-202ENST00000553656 DGKZQ13574 1117 aa16.31■□□□□ 0.2
TUBB3-202ENST00000553656 MOGSQ13724 837 aa16.31■□□□□ 0.2
TUBB3-202ENST00000553656 KRT32Q14532 448 aa16.31■□□□□ 0.2
TUBB3-202ENST00000553656 LRRC47Q8N1G4 583 aaKnown RBP16.31■□□□□ 0.2
TUBB3-202ENST00000553656 VCPKMTQ9H867 229 aa16.31■□□□□ 0.2
TUBB3-202ENST00000553656 ZFYVE28Q9HCC9 887 aa16.31■□□□□ 0.2
TUBB3-202ENST00000553656 EMILIN3Q9NT22 766 aa16.31■□□□□ 0.2
TUBB3-202ENST00000553656 TCP11L1Q9NUJ3 509 aa16.31■□□□□ 0.2
TUBB3-202ENST00000553656 SYNPO2Q9UMS6 1093 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms