RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 APOBRQ0VD83 1088 aa11.89□□□□□ -0.51
MMP19-209ENST00000552872 AXDND1Q5T1B0 1012 aaPredicted RBP11.89□□□□□ -0.51
MMP19-209ENST00000552872 MAP1SQ66K74 1059 aaPredicted RBP11.89□□□□□ -0.51
MMP19-209ENST00000552872 MB21D2Q8IYB1 491 aaPredicted RBP11.89□□□□□ -0.51
MMP19-209ENST00000552872 NECAB1Q8N987 351 aa11.89□□□□□ -0.51
MMP19-209ENST00000552872 NCOA7Q8NI08 942 aa11.89□□□□□ -0.51
MMP19-209ENST00000552872 GPT2Q8TD30 523 aa11.89□□□□□ -0.51
MMP19-209ENST00000552872 BRF1Q92994 677 aa11.89□□□□□ -0.51
MMP19-209ENST00000552872 ADARB2Q9NS39 739 aaKnown RBP11.89□□□□□ -0.51
MMP19-209ENST00000552872 DCAF8L1A6NGE4 600 aa11.88□□□□□ -0.51
MMP19-209ENST00000552872 SPDYE4A6NLX3 237 aa11.88□□□□□ -0.51
MMP19-209ENST00000552872 PTMAP06454 111 aaKnown RBP11.88□□□□□ -0.51
MMP19-209ENST00000552872 ANAPC15P60006 121 aa11.88□□□□□ -0.51
MMP19-209ENST00000552872 TFAP4Q01664 338 aa11.88□□□□□ -0.51
MMP19-209ENST00000552872 TRDNQ13061 729 aa11.88□□□□□ -0.51
MMP19-209ENST00000552872 TOB2Q14106 344 aaPredicted RBP11.88□□□□□ -0.51
MMP19-209ENST00000552872 STAG1Q8WVM7 1258 aa11.88□□□□□ -0.51
MMP19-209ENST00000552872 TAF1DQ9H5J8 278 aaPredicted RBP11.88□□□□□ -0.51
MMP19-209ENST00000552872 CWC22Q9HCG8 908 aaKnown RBP11.88□□□□□ -0.51
MMP19-209ENST00000552872 CGNQ9P2M7 1197 aaKnown RBP11.88□□□□□ -0.51
MMP19-209ENST00000552872 SERPINB13Q9UIV8 391 aa11.88□□□□□ -0.51
MMP19-209ENST00000552872 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.88□□□□□ -0.51
MMP19-209ENST00000552872 BAZ2BQ9UIF8 2168 aaKnown RBP11.88□□□□□ -0.51
MMP19-209ENST00000552872 TSPY2A6NKD2 308 aa11.87□□□□□ -0.51
MMP19-209ENST00000552872 TRAF5O00463 557 aa11.87□□□□□ -0.51
MMP19-209ENST00000552872 AKR1B1P15121 316 aa11.87□□□□□ -0.51
MMP19-209ENST00000552872 GIMAP6Q6P9H5 292 aa11.87□□□□□ -0.51
MMP19-209ENST00000552872 AMOTL1Q8IY63 956 aa11.87□□□□□ -0.51
MMP19-209ENST00000552872 MTMR14Q8NCE2 650 aa11.87□□□□□ -0.51
MMP19-209ENST00000552872 TTC14Q96N46 770 aa11.87□□□□□ -0.51
MMP19-209ENST00000552872 GLIS2Q9BZE0 524 aaPredicted RBP11.87□□□□□ -0.51
MMP19-209ENST00000552872 RBM27Q9P2N5 1060 aaKnown RBP11.87□□□□□ -0.51
MMP19-209ENST00000552872 SYCE3A1L190 88 aa11.87□□□□□ -0.51
MMP19-209ENST00000552872 PRPF40AO75400 957 aaKnown RBP11.87□□□□□ -0.51
MMP19-209ENST00000552872 RASA1P20936 1047 aa11.87□□□□□ -0.51
MMP19-209ENST00000552872 SHMT1P34896 483 aa11.87□□□□□ -0.51
MMP19-209ENST00000552872 PSEN1P49768 467 aa11.87□□□□□ -0.51
MMP19-209ENST00000552872 ATP2B2Q01814 1243 aa11.87□□□□□ -0.51
MMP19-209ENST00000552872 SBK1Q52WX2 424 aa11.87□□□□□ -0.51
MMP19-209ENST00000552872 MOB2Q70IA6 237 aa11.87□□□□□ -0.51
MMP19-209ENST00000552872 DHX32Q7L7V1 743 aaKnown RBP11.87□□□□□ -0.51
MMP19-209ENST00000552872 TPCN1Q9ULQ1 816 aa11.87□□□□□ -0.51
MMP19-209ENST00000552872 KIF3AQ9Y496 699 aa11.87□□□□□ -0.51
MMP19-209ENST00000552872 ZMYM6O95789 1325 aa11.87□□□□□ -0.51
MMP19-209ENST00000552872 RAD21O60216 631 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 HLA-DOAP06340 250 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 EXOSC10Q01780 885 aaKnown RBP11.86□□□□□ -0.51
MMP19-209ENST00000552872 TSGA10IPQ3SY00 556 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 USP48Q86UV5 1035 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 FAM151AQ8WW52 585 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 TEPSINQ96N21 525 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 TRIM34Q9BYJ4 488 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 ZNF408Q9H9D4 720 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 NCOA5Q9HCD5 579 aaKnown RBP11.86□□□□□ -0.51
MMP19-209ENST00000552872 TMEM63CQ9P1W3 806 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 ANAPC4Q9UJX5 808 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.86□□□□□ -0.51
MMP19-209ENST00000552872 IFIT3O14879 490 aaKnown RBP11.86□□□□□ -0.51
MMP19-209ENST00000552872 MBD3O95983 291 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 TSPY3P0CV98 308 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 TSPY8P0CW00 308 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 PSMA5P28066 241 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 CCT2P78371 535 aaKnown RBP11.86□□□□□ -0.51
MMP19-209ENST00000552872 PDE4BQ07343 736 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 PKP1Q13835 747 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 KRT32Q14532 448 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 C16orf86Q6ZW13 317 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 KRT26Q7Z3Y9 468 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 TTC6Q86TZ1 520 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 CMTR1Q8N1G2 835 aaKnown RBP11.86□□□□□ -0.51
MMP19-209ENST00000552872 PDCL2Q8N4E4 241 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 CHAMP1Q96JM3 812 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 L3MBTL3Q96JM7 780 aaPredicted RBP11.86□□□□□ -0.51
MMP19-209ENST00000552872 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.86□□□□□ -0.51
MMP19-209ENST00000552872 IL17RBQ9NRM6 502 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 PI4KBQ9UBF8 816 aa11.86□□□□□ -0.51
MMP19-209ENST00000552872 IGSF3O75054 1194 aa11.85□□□□□ -0.51
MMP19-209ENST00000552872 GABPAQ06546 454 aa11.85□□□□□ -0.51
MMP19-209ENST00000552872 TMEM67Q5HYA8 995 aa11.85□□□□□ -0.51
MMP19-209ENST00000552872 STX8Q9UNK0 236 aa11.85□□□□□ -0.51
MMP19-209ENST00000552872 TNKSO95271 1327 aa11.85□□□□□ -0.51
MMP19-209ENST00000552872 ST18O60284 1047 aa11.85□□□□□ -0.51
MMP19-209ENST00000552872 DGKZQ13574 1117 aa11.85□□□□□ -0.51
MMP19-209ENST00000552872 ME3Q16798 604 aa11.85□□□□□ -0.51
MMP19-209ENST00000552872 TMED8Q6PL24 325 aaPredicted RBP11.85□□□□□ -0.51
MMP19-209ENST00000552872 ZNF444Q8N0Y2 327 aaPredicted RBP11.85□□□□□ -0.51
MMP19-209ENST00000552872 ZKSCAN4Q969J2 545 aaPredicted RBP11.85□□□□□ -0.51
MMP19-209ENST00000552872 PGAP2Q9UHJ9 254 aa11.85□□□□□ -0.51
MMP19-209ENST00000552872 BRCA2P51587 3418 aa11.84□□□□□ -0.51
MMP19-209ENST00000552872 EPB41L2O43491 1005 aaKnown RBP11.84□□□□□ -0.51
MMP19-209ENST00000552872 ENTPD3O75355 529 aa11.84□□□□□ -0.51
MMP19-209ENST00000552872 SLC3A2P08195 630 aaKnown RBP11.84□□□□□ -0.51
MMP19-209ENST00000552872 FAM193AP78312 1265 aa11.84□□□□□ -0.51
MMP19-209ENST00000552872 NFXL1Q6ZNB6 911 aa11.84□□□□□ -0.51
MMP19-209ENST00000552872 ZNF771Q7L3S4 317 aaPredicted RBP11.84□□□□□ -0.51
MMP19-209ENST00000552872 CERS3Q8IU89 383 aa11.84□□□□□ -0.51
MMP19-209ENST00000552872 CCDC82Q8N4S0 544 aa11.84□□□□□ -0.51
MMP19-209ENST00000552872 ENAHQ8N8S7 591 aaPredicted RBP11.84□□□□□ -0.51
MMP19-209ENST00000552872 ESR2Q92731 530 aa11.84□□□□□ -0.51
MMP19-209ENST00000552872 DCPSQ96C86 337 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms