RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 CLEC10AQ8IUN9 316 aa11.77□□□□□ -0.53
LETMD1-234ENST00000552645 TSKSQ9UJT2 592 aa11.77□□□□□ -0.53
LETMD1-234ENST00000552645 ISY1Q9ULR0 285 aaKnown RBP11.77□□□□□ -0.53
LETMD1-234ENST00000552645 MYH4Q9Y623 1939 aa11.77□□□□□ -0.53
LETMD1-234ENST00000552645 ZMYM6O95789 1325 aa11.76□□□□□ -0.53
LETMD1-234ENST00000552645 RANBP6O60518 1105 aaKnown RBP11.76□□□□□ -0.53
LETMD1-234ENST00000552645 RASA1P20936 1047 aa11.76□□□□□ -0.53
LETMD1-234ENST00000552645 HMGCS2P54868 508 aa11.76□□□□□ -0.53
LETMD1-234ENST00000552645 DGKZQ13574 1117 aa11.76□□□□□ -0.53
LETMD1-234ENST00000552645 BECN1Q14457 450 aa11.76□□□□□ -0.53
LETMD1-234ENST00000552645 IMMTQ16891 758 aaKnown RBP11.76□□□□□ -0.53
LETMD1-234ENST00000552645 BRI3BPQ8WY22 251 aa11.76□□□□□ -0.53
LETMD1-234ENST00000552645 MS4A4AQ96JQ5 239 aa11.76□□□□□ -0.53
LETMD1-234ENST00000552645 CCDC17Q96LX7 622 aa11.76□□□□□ -0.53
LETMD1-234ENST00000552645 TSPY2A6NKD2 308 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 IGF2BP3O00425 579 aaKnown RBP eCLIP11.75□□□□□ -0.53
LETMD1-234ENST00000552645 CXCL11O14625 94 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 RAD21O60216 631 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 TSPY3P0CV98 308 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 TSPY8P0CW00 308 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 HSPA1AP0DMV8 641 aaKnown RBP11.75□□□□□ -0.53
LETMD1-234ENST00000552645 HSPA1BP0DMV9 641 aaKnown RBP11.75□□□□□ -0.53
LETMD1-234ENST00000552645 TM4SF4P48230 202 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 INHBEP58166 350 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 TFAP4Q01664 338 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 OTUD7BQ6GQQ9 843 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 MFSD6Q6ZSS7 791 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 IFNL1Q8IU54 200 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 TBC1D10CQ8IV04 446 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 REM2Q8IYK8 340 aaPredicted RBP11.75□□□□□ -0.53
LETMD1-234ENST00000552645 ACER1Q8TDN7 264 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 GINM1Q9NU53 330 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 WBP1LQ9NX94 342 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 ANAPC4Q9UJX5 808 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 TAOK2Q9UL54 1235 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 KCNH4Q9UQ05 1017 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 BTBD19C9JJ37 291 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 USP17L10C9JJH3 530 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 GUCY1A2P33402 732 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 ICA1Q05084 483 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 AKNAD1Q5T1N1 836 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 PTPN18Q99952 460 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 WDR18Q9BV38 432 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 TBC1D2Q9BYX2 928 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 NBPF3Q9H094 633 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 RNF186Q9NXI6 227 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 TMOD4Q9NZQ9 345 aa11.75□□□□□ -0.53
LETMD1-234ENST00000552645 RBM8AQ9Y5S9 174 aaKnown RBP11.75□□□□□ -0.53
LETMD1-234ENST00000552645 U3KPZ7 1027 aaPredicted RBP11.75□□□□□ -0.53
LETMD1-234ENST00000552645 A0A0G2JLL6 359 aaPredicted RBP11.74□□□□□ -0.53
LETMD1-234ENST00000552645 TBC1D8O95759 1140 aa11.74□□□□□ -0.53
LETMD1-234ENST00000552645 BACE1P56817 501 aa11.74□□□□□ -0.53
LETMD1-234ENST00000552645 FASTKD5Q7L8L6 764 aaKnown RBP11.74□□□□□ -0.53
LETMD1-234ENST00000552645 PRRT2Q7Z6L0 340 aaPredicted RBP11.74□□□□□ -0.53
LETMD1-234ENST00000552645 LSG1Q9H089 658 aaKnown RBP11.74□□□□□ -0.53
LETMD1-234ENST00000552645 RNF41Q9H4P4 317 aaPredicted RBP11.74□□□□□ -0.53
LETMD1-234ENST00000552645 KANSL2Q9H9L4 492 aa11.74□□□□□ -0.53
LETMD1-234ENST00000552645 ARHGEF10LQ9HCE6 1279 aa11.74□□□□□ -0.53
LETMD1-234ENST00000552645 TACC3Q9Y6A5 838 aa11.74□□□□□ -0.53
LETMD1-234ENST00000552645 GOLGA6L3A6NEY3 463 aa11.73□□□□□ -0.53
LETMD1-234ENST00000552645 PDHXO00330 501 aa11.73□□□□□ -0.53
LETMD1-234ENST00000552645 FOXN1O15353 648 aa11.73□□□□□ -0.53
LETMD1-234ENST00000552645 EEF2P13639 858 aaKnown RBP11.73□□□□□ -0.53
LETMD1-234ENST00000552645 TAF1CQ15572 869 aaPredicted RBP11.73□□□□□ -0.53
LETMD1-234ENST00000552645 STAG1Q8WVM7 1258 aa11.73□□□□□ -0.53
LETMD1-234ENST00000552645 MAP4K1Q92918 833 aa11.73□□□□□ -0.53
LETMD1-234ENST00000552645 CHMP4CQ96CF2 233 aa11.73□□□□□ -0.53
LETMD1-234ENST00000552645 PDCL3Q9H2J4 239 aa11.73□□□□□ -0.53
LETMD1-234ENST00000552645 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.73□□□□□ -0.53
LETMD1-234ENST00000552645 GREB1LQ9C091 1923 aaPredicted RBP11.73□□□□□ -0.53
LETMD1-234ENST00000552645 LOC285556D6RIA3 1793 aa11.73□□□□□ -0.53
LETMD1-234ENST00000552645 NEDD4P46934 1319 aa11.73□□□□□ -0.53
LETMD1-234ENST00000552645 A0A1W2PRG0 241 aa11.72□□□□□ -0.53
LETMD1-234ENST00000552645 TESPA1A2RU30 521 aaPredicted RBP11.72□□□□□ -0.53
LETMD1-234ENST00000552645 C19orf81C9J6K1 198 aa11.72□□□□□ -0.53
LETMD1-234ENST00000552645 ORC4O43929 436 aa11.72□□□□□ -0.53
LETMD1-234ENST00000552645 NMT2O60551 498 aa11.72□□□□□ -0.53
LETMD1-234ENST00000552645 ALDH1A1P00352 501 aa11.72□□□□□ -0.53
LETMD1-234ENST00000552645 CYP21A2P08686 494 aa11.72□□□□□ -0.53
LETMD1-234ENST00000552645 TREML2Q5T2D2 321 aa11.72□□□□□ -0.53
LETMD1-234ENST00000552645 USP17L2Q6R6M4 530 aa11.72□□□□□ -0.53
LETMD1-234ENST00000552645 SPICE1Q8N0Z3 855 aa11.72□□□□□ -0.53
LETMD1-234ENST00000552645 CEP95Q96GE4 821 aa11.72□□□□□ -0.53
LETMD1-234ENST00000552645 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.72□□□□□ -0.53
LETMD1-234ENST00000552645 CLIP2Q9UDT6 1046 aa11.72□□□□□ -0.53
LETMD1-234ENST00000552645 CASP8AP2Q9UKL3 1982 aa11.72□□□□□ -0.53
LETMD1-234ENST00000552645 B4E1Z4 1266 aa11.71□□□□□ -0.53
LETMD1-234ENST00000552645 CA12O43570 354 aa11.71□□□□□ -0.53
LETMD1-234ENST00000552645 KDM4AO75164 1064 aa11.71□□□□□ -0.53
LETMD1-234ENST00000552645 XRCC6P12956 609 aaKnown RBP eCLIP11.71□□□□□ -0.53
LETMD1-234ENST00000552645 USP14P54578 494 aa11.71□□□□□ -0.53
LETMD1-234ENST00000552645 TRDNQ13061 729 aa11.71□□□□□ -0.53
LETMD1-234ENST00000552645 CRHR2Q13324 411 aa11.71□□□□□ -0.53
LETMD1-234ENST00000552645 MOGSQ13724 837 aa11.71□□□□□ -0.53
LETMD1-234ENST00000552645 SAMD1Q6SPF0 538 aaPredicted RBP11.71□□□□□ -0.53
LETMD1-234ENST00000552645 NEDD1Q8NHV4 660 aa11.71□□□□□ -0.53
LETMD1-234ENST00000552645 ESR2Q92731 530 aa11.71□□□□□ -0.53
LETMD1-234ENST00000552645 ZKSCAN3Q9BRR0 538 aa11.71□□□□□ -0.53
LETMD1-234ENST00000552645 SH2D4AQ9H788 454 aa11.71□□□□□ -0.53
LETMD1-234ENST00000552645 EMILIN3Q9NT22 766 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms