RNA–Protein interactions for RNA: ENST00000552562.1

CBX5-205, Transcript of chromobox 5, humanhuman

TSL 4

Gene CBX5, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-205ENST00000552562 VGLL4Q14135 290 aa9.43□□□□□ -0.9
CBX5-205ENST00000552562 MAP3K11Q16584 847 aa9.43□□□□□ -0.9
CBX5-205ENST00000552562 VARS2Q5ST30 1063 aaKnown RBP9.43□□□□□ -0.9
CBX5-205ENST00000552562 RNF20Q5VTR2 975 aa9.43□□□□□ -0.9
CBX5-205ENST00000552562 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.43□□□□□ -0.9
CBX5-205ENST00000552562 ZNF444Q8N0Y2 327 aaPredicted RBP9.43□□□□□ -0.9
CBX5-205ENST00000552562 STAG1Q8WVM7 1258 aa9.43□□□□□ -0.9
CBX5-205ENST00000552562 RNF166Q96A37 237 aaPredicted RBP9.43□□□□□ -0.9
CBX5-205ENST00000552562 ELP3Q9H9T3 547 aa9.43□□□□□ -0.9
CBX5-205ENST00000552562 ABT1Q9ULW3 272 aaKnown RBP9.43□□□□□ -0.9
CBX5-205ENST00000552562 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.43□□□□□ -0.9
CBX5-205ENST00000552562 B4E1Z4 1266 aa9.42□□□□□ -0.9
CBX5-205ENST00000552562 RANBP6O60518 1105 aaKnown RBP9.42□□□□□ -0.9
CBX5-205ENST00000552562 FGRP09769 529 aa9.42□□□□□ -0.9
CBX5-205ENST00000552562 CAP2P40123 477 aa9.42□□□□□ -0.9
CBX5-205ENST00000552562 APLP1P51693 650 aa9.42□□□□□ -0.9
CBX5-205ENST00000552562 C1QTNF8P60827 252 aa9.42□□□□□ -0.9
CBX5-205ENST00000552562 FKBP1BP68106 108 aa9.42□□□□□ -0.9
CBX5-205ENST00000552562 HTRA3P83110 453 aa9.42□□□□□ -0.9
CBX5-205ENST00000552562 TFAP4Q01664 338 aa9.42□□□□□ -0.9
CBX5-205ENST00000552562 COL9A3Q14050 684 aaPredicted RBP9.42□□□□□ -0.9
CBX5-205ENST00000552562 RAB3GAP1Q15042 981 aa9.42□□□□□ -0.9
CBX5-205ENST00000552562 ABCB5Q2M3G0 1257 aa9.42□□□□□ -0.9
CBX5-205ENST00000552562 LDLRAD1Q5T700 205 aa9.42□□□□□ -0.9
CBX5-205ENST00000552562 SAPCD2Q86UD0 394 aa9.42□□□□□ -0.9
CBX5-205ENST00000552562 CLEC10AQ8IUN9 316 aa9.42□□□□□ -0.9
CBX5-205ENST00000552562 ANKRD13AQ8IZ07 590 aa9.42□□□□□ -0.9
CBX5-205ENST00000552562 SCYL3Q8IZE3 742 aa9.42□□□□□ -0.9
CBX5-205ENST00000552562 BACH2Q9BYV9 841 aa9.42□□□□□ -0.9
CBX5-205ENST00000552562 RNF41Q9H4P4 317 aaPredicted RBP9.42□□□□□ -0.9
CBX5-205ENST00000552562 ZNF287Q9HBT7 754 aa9.42□□□□□ -0.9
CBX5-205ENST00000552562 CSADQ9Y600 493 aa9.42□□□□□ -0.9
CBX5-205ENST00000552562 SNCAIPQ9Y6H5 919 aa9.42□□□□□ -0.9
CBX5-205ENST00000552562 TLL2Q9Y6L7 1015 aa9.42□□□□□ -0.9
CBX5-205ENST00000552562 AK9Q5TCS8 1911 aa9.42□□□□□ -0.9
CBX5-205ENST00000552562 NAV1Q8NEY1 1877 aa9.42□□□□□ -0.9
CBX5-205ENST00000552562 ECM29Q5VYK3 1845 aa9.41□□□□□ -0.9
CBX5-205ENST00000552562 TSPY2A6NKD2 308 aa9.41□□□□□ -0.9
CBX5-205ENST00000552562 EPB41L2O43491 1005 aaKnown RBP9.41□□□□□ -0.9
CBX5-205ENST00000552562 ORC4O43929 436 aa9.41□□□□□ -0.9
CBX5-205ENST00000552562 CTNND1O60716 968 aaKnown RBP9.41□□□□□ -0.9
CBX5-205ENST00000552562 EIF5BO60841 1220 aaKnown RBP9.41□□□□□ -0.9
CBX5-205ENST00000552562 KDM4AO75164 1064 aa9.41□□□□□ -0.9
CBX5-205ENST00000552562 TSPY3P0CV98 308 aa9.41□□□□□ -0.9
CBX5-205ENST00000552562 TSPY8P0CW00 308 aa9.41□□□□□ -0.9
CBX5-205ENST00000552562 ZKSCAN1P17029 563 aaPredicted RBP9.41□□□□□ -0.9
CBX5-205ENST00000552562 MCCP23508 829 aa9.41□□□□□ -0.9
CBX5-205ENST00000552562 SEPT2Q15019 361 aa9.41□□□□□ -0.9
CBX5-205ENST00000552562 ADCK5Q3MIX3 580 aa9.41□□□□□ -0.9
CBX5-205ENST00000552562 NOL9Q5SY16 702 aaKnown RBP9.41□□□□□ -0.9
CBX5-205ENST00000552562 GPR153Q6NV75 609 aa9.41□□□□□ -0.9
CBX5-205ENST00000552562 CHST3Q7LGC8 479 aa9.41□□□□□ -0.9
CBX5-205ENST00000552562 RALYLQ86SE5 291 aaKnown RBP9.41□□□□□ -0.9
CBX5-205ENST00000552562 CCDC17Q96LX7 622 aa9.41□□□□□ -0.9
CBX5-205ENST00000552562 ZKSCAN3Q9BRR0 538 aa9.41□□□□□ -0.9
CBX5-205ENST00000552562 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.41□□□□□ -0.9
CBX5-205ENST00000552562 CABP5Q9NP86 173 aa9.41□□□□□ -0.9
CBX5-205ENST00000552562 PICK1Q9NRD5 415 aa9.41□□□□□ -0.9
CBX5-205ENST00000552562 ZBTB21Q9ULJ3 1066 aa9.41□□□□□ -0.9
CBX5-205ENST00000552562 SNX14Q9Y5W7 946 aa9.41□□□□□ -0.9
CBX5-205ENST00000552562 NMT2O60551 498 aa9.4□□□□□ -0.9
CBX5-205ENST00000552562 ASNSP08243 561 aa9.4□□□□□ -0.9
CBX5-205ENST00000552562 PCP11498 1178 aaKnown RBP9.4□□□□□ -0.9
CBX5-205ENST00000552562 CPA1P15085 419 aa9.4□□□□□ -0.9
CBX5-205ENST00000552562 PTPRAP18433 802 aa9.4□□□□□ -0.9
CBX5-205ENST00000552562 GUCY1A2P33402 732 aa9.4□□□□□ -0.9
CBX5-205ENST00000552562 ATP2B2Q01814 1243 aa9.4□□□□□ -0.9
CBX5-205ENST00000552562 TRDNQ13061 729 aa9.4□□□□□ -0.9
CBX5-205ENST00000552562 GRM1Q13255 1194 aa9.4□□□□□ -0.9
CBX5-205ENST00000552562 TMEM179Q6ZVK1 233 aa9.4□□□□□ -0.9
CBX5-205ENST00000552562 PAXIP1Q6ZW49 1069 aaPredicted RBP9.4□□□□□ -0.9
CBX5-205ENST00000552562 CYB5R4Q7L1T6 521 aa9.4□□□□□ -0.9
CBX5-205ENST00000552562 NEDD1Q8NHV4 660 aa9.4□□□□□ -0.9
CBX5-205ENST00000552562 NCOA7Q8NI08 942 aa9.4□□□□□ -0.9
CBX5-205ENST00000552562 ESR2Q92731 530 aa9.4□□□□□ -0.9
CBX5-205ENST00000552562 KCNB2Q92953 911 aa9.4□□□□□ -0.9
CBX5-205ENST00000552562 OPTNQ96CV9 577 aa9.4□□□□□ -0.9
CBX5-205ENST00000552562 SLC10A4Q96EP9 437 aa9.4□□□□□ -0.9
CBX5-205ENST00000552562 JAKMIP1Q96N16 626 aaKnown RBP9.4□□□□□ -0.9
CBX5-205ENST00000552562 NEK1Q96PY6 1258 aa9.4□□□□□ -0.9
CBX5-205ENST00000552562 C22orf23Q9BZE7 217 aa9.4□□□□□ -0.9
CBX5-205ENST00000552562 KRT23Q9C075 422 aa9.4□□□□□ -0.9
CBX5-205ENST00000552562 ZSWIM5Q9P217 1185 aa9.4□□□□□ -0.9
CBX5-205ENST00000552562 TAOK2Q9UL54 1235 aa9.4□□□□□ -0.9
CBX5-205ENST00000552562 ZHX2Q9Y6X8 837 aa9.4□□□□□ -0.9
CBX5-205ENST00000552562 SIPA1L1O43166 1804 aa9.4□□□□□ -0.91
CBX5-205ENST00000552562 GJA5P36382 358 aa9.39□□□□□ -0.91
CBX5-205ENST00000552562 ZNF157P51786 506 aaPredicted RBP9.39□□□□□ -0.91
CBX5-205ENST00000552562 TSGA10IPQ3SY00 556 aa9.39□□□□□ -0.91
CBX5-205ENST00000552562 RGMBQ6NW40 437 aa9.39□□□□□ -0.91
CBX5-205ENST00000552562 CEP95Q96GE4 821 aa9.39□□□□□ -0.91
CBX5-205ENST00000552562 TCEANC2Q96MN5 208 aa9.39□□□□□ -0.91
CBX5-205ENST00000552562 CNNM2Q9H8M5 875 aa9.39□□□□□ -0.91
CBX5-205ENST00000552562 UPF2Q9HAU5 1272 aaKnown RBP9.39□□□□□ -0.91
CBX5-205ENST00000552562 IL17RBQ9NRM6 502 aa9.39□□□□□ -0.91
CBX5-205ENST00000552562 FOCADQ5VW36 1801 aa9.39□□□□□ -0.91
CBX5-205ENST00000552562 PAPPA2Q9BXP8 1791 aa9.39□□□□□ -0.91
CBX5-205ENST00000552562 CDK5RAP2Q96SN8 1893 aa9.38□□□□□ -0.91
CBX5-205ENST00000552562 IGKV6D-41A0A0C4DH26 115 aa9.38□□□□□ -0.91
CBX5-205ENST00000552562 A0A1W2PRG0 241 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms