RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 IFNL3Q8IZI9 196 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 AIDAQ96BJ3 306 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 AATFQ9NY61 560 aaKnown RBP eCLIP9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 MYO5AQ9Y4I1 1855 aaKnown RBP9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 COL1A1P02452 1464 aaPredicted RBP9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 USP27XA6NNY8 438 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 LDHBP07195 334 aaKnown RBP9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 IARSP41252 1262 aaKnown RBP9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 CEP135Q66GS9 1140 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 TMC4Q7Z404 712 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 FILIP1Q7Z7B0 1213 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 ADGRA1Q86SQ6 560 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 CCAR2Q8N163 923 aaKnown RBP9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 CCDC150Q8NCX0 1101 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 HSD3B7Q9H2F3 369 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 CNNM2Q9H8M5 875 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 PODXL2Q9NZ53 605 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 PCDHAC2Q9Y5I4 1007 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 TACC3Q9Y6A5 838 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 GOLGA8AA7E2F4 631 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 PRKAB2O43741 272 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 MBD4O95243 580 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 FMNL1O95466 1100 aaPredicted RBP9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 IFNAR1P17181 557 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 SYKP43405 635 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 RCAN1P53805 252 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 MECOMQ03112 1051 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 ZRSR1Q15695 479 aaKnown RBP9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 SMAP1Q8IYB5 467 aaPredicted RBP9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 RTKN2Q8IZC4 609 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 PDCL2Q8N4E4 241 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 PHKBQ93100 1093 aa9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 XPO4Q9C0E2 1151 aaKnown RBP9.32□□□□□ -0.92
RAB3IP-215ENST00000551641 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 GSG1L2A8MUP6 293 aa9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 NFKBIEO00221 500 aa9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 YBX3P16989 372 aaKnown RBP eCLIP9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 MARCKSP29966 332 aaPredicted RBP9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 TPM4P67936 248 aa9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 TMEM67Q5HYA8 995 aa9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 MICU3Q86XE3 530 aa9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 CCDC112Q8NEF3 446 aa9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 JDP2Q8WYK2 163 aa9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 KRT23Q9C075 422 aa9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 ZSWIM5Q9P217 1185 aa9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 NRXN2Q9P2S2 1712 aa9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 KIF2AO00139 706 aaPredicted RBP9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 MYO1BO43795 1136 aa9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 CUTAO60888 179 aa9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 GNAT2P19087 354 aa9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 RXRAP19793 462 aa9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 AKNAD1Q5T1N1 836 aa9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 NIM1KQ8IY84 436 aa9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 SDR42E1Q8WUS8 393 aa9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 STAG1Q8WVM7 1258 aa9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 ZMYND15Q9H091 742 aa9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 NAPBQ9H115 298 aa9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 IFNKQ9P0W0 207 aa9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 TTF2Q9UNY4 1162 aaKnown RBP9.31□□□□□ -0.92
RAB3IP-215ENST00000551641 YDJCA8MPS7 323 aa9.3□□□□□ -0.92
RAB3IP-215ENST00000551641 CACNB3P54284 484 aa9.3□□□□□ -0.92
RAB3IP-215ENST00000551641 PTPN14Q15678 1187 aa9.3□□□□□ -0.92
RAB3IP-215ENST00000551641 ARMCX5Q6P1M9 558 aa9.3□□□□□ -0.92
RAB3IP-215ENST00000551641 CERS5Q8N5B7 392 aa9.3□□□□□ -0.92
RAB3IP-215ENST00000551641 WASF1Q92558 559 aa9.3□□□□□ -0.92
RAB3IP-215ENST00000551641 COA1Q9GZY4 146 aa9.3□□□□□ -0.92
RAB3IP-215ENST00000551641 SLC12A7Q9Y666 1083 aa9.3□□□□□ -0.92
RAB3IP-215ENST00000551641 SHTN1A0MZ66 631 aa9.3□□□□□ -0.92
RAB3IP-215ENST00000551641 BIN1O00499 593 aa9.3□□□□□ -0.92
RAB3IP-215ENST00000551641 SSRP1Q08945 709 aaKnown RBP9.3□□□□□ -0.92
RAB3IP-215ENST00000551641 PICALMQ13492 652 aa9.3□□□□□ -0.92
RAB3IP-215ENST00000551641 TRIM29Q14134 588 aa9.3□□□□□ -0.92
RAB3IP-215ENST00000551641 PPP4R3BQ5MIZ7 849 aa9.3□□□□□ -0.92
RAB3IP-215ENST00000551641 LCORLQ8N3X6 602 aa9.3□□□□□ -0.92
RAB3IP-215ENST00000551641 MORC2Q9Y6X9 1032 aaPredicted RBP9.3□□□□□ -0.92
RAB3IP-215ENST00000551641 QSER1Q2KHR3 1735 aa9.3□□□□□ -0.92
RAB3IP-215ENST00000551641 IFIT3O14879 490 aaKnown RBP9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 MMP1P03956 469 aa9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 FANCCQ00597 558 aa9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 E4F1Q66K89 784 aaPredicted RBP9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 NFXL1Q6ZNB6 911 aa9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 METTL16Q86W50 562 aaKnown RBP9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 NOSTRINQ8IVI9 506 aa9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 INCENPQ9NQS7 918 aa9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 TOMM22Q9NS69 142 aa9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 TAOK2Q9UL54 1235 aa9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 PSMD14O00487 310 aa9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 SMC2O95347 1197 aa9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 KCNA4P22459 653 aa9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 PRELPP51888 382 aa9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 MDM2Q00987 491 aaPredicted RBP9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 MYL5Q02045 173 aa9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 CTDSPL2Q05D32 466 aa9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 KRBA2Q6ZNG9 492 aa9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 MFSD6Q6ZSS7 791 aa9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 WDR66Q8TBY9 1149 aa9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 ZNF384Q8TF68 577 aa9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 MYL10Q9BUA6 226 aa9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 FOXP1Q9H334 677 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms