RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 TCP10Q12799 353 aa16.55■□□□□ 0.24
LETMD1-229ENST00000551261 IFFO2Q5TF58 517 aa16.55■□□□□ 0.24
LETMD1-229ENST00000551261 TMEM179Q6ZVK1 233 aa16.55■□□□□ 0.24
LETMD1-229ENST00000551261 NKX2-3Q8TAU0 364 aa16.55■□□□□ 0.24
LETMD1-229ENST00000551261 ZSCAN16Q9H4T2 348 aaPredicted RBP16.55■□□□□ 0.24
LETMD1-229ENST00000551261 IL17RBQ9NRM6 502 aa16.55■□□□□ 0.24
LETMD1-229ENST00000551261 RNF181Q9P0P0 153 aa16.55■□□□□ 0.24
LETMD1-229ENST00000551261 PCDHAC2Q9Y5I4 1007 aa16.55■□□□□ 0.24
LETMD1-229ENST00000551261 CNTNAP1P78357 1384 aa16.54■□□□□ 0.24
LETMD1-229ENST00000551261 PITPNM2Q9BZ72 1349 aa16.54■□□□□ 0.24
LETMD1-229ENST00000551261 JAK2O60674 1132 aa16.54■□□□□ 0.24
LETMD1-229ENST00000551261 DEXIO95424 95 aa16.54■□□□□ 0.24
LETMD1-229ENST00000551261 F13A1P00488 732 aa16.54■□□□□ 0.24
LETMD1-229ENST00000551261 XBP1P17861 261 aa16.54■□□□□ 0.24
LETMD1-229ENST00000551261 SMARCA1P28370 1054 aa16.54■□□□□ 0.24
LETMD1-229ENST00000551261 LMOD1P29536 600 aaPredicted RBP16.54■□□□□ 0.24
LETMD1-229ENST00000551261 CACNB3P54284 484 aa16.54■□□□□ 0.24
LETMD1-229ENST00000551261 SSRP1Q08945 709 aaKnown RBP16.54■□□□□ 0.24
LETMD1-229ENST00000551261 NTRK3Q16288 839 aa16.54■□□□□ 0.24
LETMD1-229ENST00000551261 CSPP1Q1MSJ5 1256 aa16.54■□□□□ 0.24
LETMD1-229ENST00000551261 SLC4A8Q2Y0W8 1093 aa16.54■□□□□ 0.24
LETMD1-229ENST00000551261 KANSL2Q9H9L4 492 aa16.54■□□□□ 0.24
LETMD1-229ENST00000551261 VEZTQ9HBM0 779 aa16.54■□□□□ 0.24
LETMD1-229ENST00000551261 SENP2Q9HC62 589 aa16.54■□□□□ 0.24
LETMD1-229ENST00000551261 MTMR4Q9NYA4 1195 aa16.54■□□□□ 0.24
LETMD1-229ENST00000551261 ORC3Q9UBD5 711 aaPredicted RBP16.54■□□□□ 0.24
LETMD1-229ENST00000551261 STX8Q9UNK0 236 aa16.54■□□□□ 0.24
LETMD1-229ENST00000551261 MTMR6Q9Y217 621 aa16.54■□□□□ 0.24
LETMD1-229ENST00000551261 CLRN2A0PK11 232 aa16.53■□□□□ 0.24
LETMD1-229ENST00000551261 VPS37CA5D8V6 355 aaPredicted RBP16.53■□□□□ 0.24
LETMD1-229ENST00000551261 TCP10L2B9ZVM9 353 aa16.53■□□□□ 0.24
LETMD1-229ENST00000551261 YBX3P16989 372 aaKnown RBP eCLIP16.53■□□□□ 0.24
LETMD1-229ENST00000551261 AKAP17AQ02040 695 aaKnown RBP16.53■□□□□ 0.24
LETMD1-229ENST00000551261 TRIM29Q14134 588 aa16.53■□□□□ 0.24
LETMD1-229ENST00000551261 NFKBIBQ15653 356 aa16.53■□□□□ 0.24
LETMD1-229ENST00000551261 CERKLQ49MI3 558 aaPredicted RBP16.53■□□□□ 0.24
LETMD1-229ENST00000551261 TMTC3Q6ZXV5 915 aa16.53■□□□□ 0.24
LETMD1-229ENST00000551261 SH3BP5LQ7L8J4 393 aa16.53■□□□□ 0.24
LETMD1-229ENST00000551261 NUP133Q8WUM0 1156 aa16.53■□□□□ 0.24
LETMD1-229ENST00000551261 DNAJC18Q9H819 358 aa16.53■□□□□ 0.24
LETMD1-229ENST00000551261 CABP5Q9NP86 173 aa16.53■□□□□ 0.24
LETMD1-229ENST00000551261 FAM217BQ9NTX9 383 aaPredicted RBP16.53■□□□□ 0.24
LETMD1-229ENST00000551261 ZDHHC9Q9Y397 364 aa16.53■□□□□ 0.24
LETMD1-229ENST00000551261 CDC27P30260 824 aa16.52■□□□□ 0.24
LETMD1-229ENST00000551261 MCM4P33991 863 aa16.52■□□□□ 0.24
LETMD1-229ENST00000551261 ADD1P35611 737 aaKnown RBP16.52■□□□□ 0.24
LETMD1-229ENST00000551261 MAP3K10Q02779 954 aa16.52■□□□□ 0.24
LETMD1-229ENST00000551261 GRM4Q14833 912 aa16.52■□□□□ 0.24
LETMD1-229ENST00000551261 ATL3Q6DD88 541 aa16.52■□□□□ 0.24
LETMD1-229ENST00000551261 DPY19L2Q6NUT2 758 aa16.52■□□□□ 0.24
LETMD1-229ENST00000551261 CEP95Q96GE4 821 aa16.52■□□□□ 0.24
LETMD1-229ENST00000551261 C8orf76Q96K31 380 aa16.52■□□□□ 0.24
LETMD1-229ENST00000551261 TMEM47Q9BQJ4 181 aa16.52■□□□□ 0.24
LETMD1-229ENST00000551261 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.52■□□□□ 0.24
LETMD1-229ENST00000551261 NYAP2Q9P242 653 aa16.52■□□□□ 0.24
LETMD1-229ENST00000551261 NMT2O60551 498 aa16.51■□□□□ 0.23
LETMD1-229ENST00000551261 BAG4O95429 457 aaKnown RBP16.51■□□□□ 0.23
LETMD1-229ENST00000551261 AKR1B1P15121 316 aa16.51■□□□□ 0.23
LETMD1-229ENST00000551261 PKP1Q13835 747 aa16.51■□□□□ 0.23
LETMD1-229ENST00000551261 ABCB5Q2M3G0 1257 aa16.51■□□□□ 0.23
LETMD1-229ENST00000551261 NBPF9Q3BBW0 867 aa16.51■□□□□ 0.23
LETMD1-229ENST00000551261 ASPRV1Q53RT3 343 aa16.51■□□□□ 0.23
LETMD1-229ENST00000551261 RBM26Q5T8P6 1007 aaKnown RBP16.51■□□□□ 0.23
LETMD1-229ENST00000551261 ZFPM1Q8IX07 1006 aa16.51■□□□□ 0.23
LETMD1-229ENST00000551261 DDX11Q96FC9 970 aa16.51■□□□□ 0.23
LETMD1-229ENST00000551261 L3MBTL3Q96JM7 780 aaPredicted RBP16.51■□□□□ 0.23
LETMD1-229ENST00000551261 MYL10Q9BUA6 226 aa16.51■□□□□ 0.23
LETMD1-229ENST00000551261 ADARB2Q9NS39 739 aaKnown RBP16.51■□□□□ 0.23
LETMD1-229ENST00000551261 PRPF3O43395 683 aaKnown RBP16.5■□□□□ 0.23
LETMD1-229ENST00000551261 FDPSP14324 419 aaKnown RBP16.5■□□□□ 0.23
LETMD1-229ENST00000551261 GPR162Q16538 588 aa16.5■□□□□ 0.23
LETMD1-229ENST00000551261 GPATCH4Q5T3I0 446 aaKnown RBP16.5■□□□□ 0.23
LETMD1-229ENST00000551261 C9orf131Q5VYM1 1079 aa16.5■□□□□ 0.23
LETMD1-229ENST00000551261 DCAF15Q66K64 600 aa16.5■□□□□ 0.23
LETMD1-229ENST00000551261 BRAPQ7Z569 592 aa16.5■□□□□ 0.23
LETMD1-229ENST00000551261 FBXO18Q8NFZ0 1043 aa16.5■□□□□ 0.23
LETMD1-229ENST00000551261 MKL1Q969V6 931 aa16.5■□□□□ 0.23
LETMD1-229ENST00000551261 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.5■□□□□ 0.23
LETMD1-229ENST00000551261 SH2D4AQ9H788 454 aa16.5■□□□□ 0.23
LETMD1-229ENST00000551261 hCG_1984214I3L0E3 225 aa16.49■□□□□ 0.23
LETMD1-229ENST00000551261 MPHOSPH10O00566 681 aaKnown RBP16.49■□□□□ 0.23
LETMD1-229ENST00000551261 PARP1P09874 1014 aaKnown RBP16.49■□□□□ 0.23
LETMD1-229ENST00000551261 SNHG28P0DPA3 235 aa16.49■□□□□ 0.23
LETMD1-229ENST00000551261 RXRAP19793 462 aa16.49■□□□□ 0.23
LETMD1-229ENST00000551261 RASA3Q14644 834 aa16.49■□□□□ 0.23
LETMD1-229ENST00000551261 NBPF11Q86T75 865 aa16.49■□□□□ 0.23
LETMD1-229ENST00000551261 CCDC144CPQ8IYA2 1237 aa16.49■□□□□ 0.23
LETMD1-229ENST00000551261 ZNF713Q8N859 430 aaPredicted RBP16.49■□□□□ 0.23
LETMD1-229ENST00000551261 ALG1Q9BT22 464 aa16.49■□□□□ 0.23
LETMD1-229ENST00000551261 SPZ1Q9BXG8 430 aa16.49■□□□□ 0.23
LETMD1-229ENST00000551261 SLC26A6Q9BXS9 759 aa16.49■□□□□ 0.23
LETMD1-229ENST00000551261 HACL1Q9UJ83 578 aa16.49■□□□□ 0.23
LETMD1-229ENST00000551261 CNTNAP5Q8WYK1 1306 aa16.48■□□□□ 0.23
LETMD1-229ENST00000551261 ICA1Q05084 483 aa16.48■□□□□ 0.23
LETMD1-229ENST00000551261 SAFBQ15424 915 aaKnown RBP eCLIP16.48■□□□□ 0.23
LETMD1-229ENST00000551261 SKOR2Q2VWA4 1001 aaPredicted RBP16.48■□□□□ 0.23
LETMD1-229ENST00000551261 TBC1D10BQ4KMP7 808 aaPredicted RBP16.48■□□□□ 0.23
LETMD1-229ENST00000551261 CDC37L1Q7L3B6 337 aa16.48■□□□□ 0.23
LETMD1-229ENST00000551261 RAB11FIP4Q86YS3 637 aa16.48■□□□□ 0.23
LETMD1-229ENST00000551261 ARHGEF10LQ9HCE6 1279 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms