RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 SYTL4Q96C24 671 aaPredicted RBP9.68□□□□□ -0.86
PPFIA2-220ENST00000550584 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.68□□□□□ -0.86
PPFIA2-220ENST00000550584 ZNF711Q9Y462 761 aa9.68□□□□□ -0.86
PPFIA2-220ENST00000550584 TTC21AQ8NDW8 1320 aa9.68□□□□□ -0.86
PPFIA2-220ENST00000550584 TADA3O75528 432 aa9.68□□□□□ -0.86
PPFIA2-220ENST00000550584 MAN1A1P33908 653 aa9.68□□□□□ -0.86
PPFIA2-220ENST00000550584 VPS41P49754 854 aa9.68□□□□□ -0.86
PPFIA2-220ENST00000550584 CUL4AQ13619 759 aa9.68□□□□□ -0.86
PPFIA2-220ENST00000550584 AGGF1Q8N302 714 aaeCLIP9.68□□□□□ -0.86
PPFIA2-220ENST00000550584 LRRC43Q8N309 656 aa9.68□□□□□ -0.86
PPFIA2-220ENST00000550584 SGSM3Q96HU1 749 aa9.68□□□□□ -0.86
PPFIA2-220ENST00000550584 SOS1Q07889 1333 aaPredicted RBP9.68□□□□□ -0.86
PPFIA2-220ENST00000550584 REREQ9P2R6 1566 aa9.68□□□□□ -0.86
PPFIA2-220ENST00000550584 TPD52L2O43399 206 aaKnown RBP9.68□□□□□ -0.86
PPFIA2-220ENST00000550584 SPAG7O75391 227 aa9.68□□□□□ -0.86
PPFIA2-220ENST00000550584 BAG2O95816 211 aa9.68□□□□□ -0.86
PPFIA2-220ENST00000550584 NDUFA5Q16718 116 aa9.68□□□□□ -0.86
PPFIA2-220ENST00000550584 SLC9C1Q4G0N8 1177 aa9.68□□□□□ -0.86
PPFIA2-220ENST00000550584 LRIG3Q6UXM1 1119 aa9.68□□□□□ -0.86
PPFIA2-220ENST00000550584 OPTNQ96CV9 577 aa9.68□□□□□ -0.86
PPFIA2-220ENST00000550584 ANO9A1A5B4 782 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 KLC3Q6P597 504 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 CCDC84Q86UT8 332 aaPredicted RBP9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 RETREG2Q8NC44 543 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 TRIM63Q969Q1 353 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 ZBTB10Q96DT7 871 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 UNC45AQ9H3U1 944 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 VCPKMTQ9H867 229 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 DIABLOQ9NR28 239 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 ATG3Q9NT62 314 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 EXOC6BQ9Y2D4 811 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 HECW1Q76N89 1606 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 CHMP2AO43633 222 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 CPP00450 1065 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 METAP2P50579 478 aaKnown RBP eCLIP9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 Q4G0T1 1027 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 PREPLQ4J6C6 727 aaPredicted RBP9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 ZC3H18Q86VM9 953 aaKnown RBP9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 ANKRD35Q8N283 1001 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 SH2D4AQ9H788 454 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 TRPC6Q9Y210 931 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 STAT6P42226 847 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 ROR2Q01974 943 aaKnown RBP9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 ARHGEF25Q86VW2 580 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 CROCCP3Q8IVE0 287 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 AIDAQ96BJ3 306 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 EFHD1Q9BUP0 239 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 SEPT10Q9P0V9 454 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 RBM8AQ9Y5S9 174 aaKnown RBP9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 THOC2Q8NI27 1593 aaKnown RBP9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 EEF1DP29692 281 aaKnown RBP9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 SNX1Q13596 522 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 CCDC14Q49A88 953 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 MSANTD4Q8NCY6 345 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 TRAPPC9Q96Q05 1148 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 TTC1Q99614 292 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 LARP6Q9BRS8 491 aaKnown RBP9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 SLC40A1Q9NP59 571 aa9.67□□□□□ -0.86
PPFIA2-220ENST00000550584 NUTM2BA6NNL0 878 aaPredicted RBP9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 NUTM2EB1AL46 878 aaPredicted RBP9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 CASP14P31944 242 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 UBA7P41226 1012 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 CTCFP49711 727 aaPredicted RBP9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 AP2B1P63010 937 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 TBC1D1Q86TI0 1168 aaPredicted RBP9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 HIC2Q96JB3 615 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 MSH6P52701 1360 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 SCAF11Q99590 1463 aaKnown RBP9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 H0YC42 278 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 CAND2O75155 1236 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 GHRP10912 638 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 HSPA6P17066 643 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 KRT9P35527 623 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 MAGEA1P43355 309 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 CCDC138Q96M89 665 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 AMOTL2Q9Y2J4 779 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 PDS5BQ9NTI5 1447 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 CTNND1O60716 968 aaKnown RBP9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 BHMTQ93088 406 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 ARHGAP42A6NI28 874 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 ZNF213O14771 459 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 HDAC4P56524 1084 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 ANO1Q5XXA6 986 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 USP37Q86T82 979 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 TRIML2Q8N7C3 387 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 SNX29Q8TEQ0 813 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 ALG1Q9BT22 464 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 FAM96AQ9H5X1 160 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 IL1RAPL2Q9NP60 686 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 NSD3Q9BZ95 1437 aa9.66□□□□□ -0.86
PPFIA2-220ENST00000550584 POTEB3A0JP26 581 aa9.65□□□□□ -0.86
PPFIA2-220ENST00000550584 PFKFB2O60825 505 aa9.65□□□□□ -0.86
PPFIA2-220ENST00000550584 ZNF202O95125 648 aa9.65□□□□□ -0.86
PPFIA2-220ENST00000550584 POLR3DP05423 398 aaPredicted RBP9.65□□□□□ -0.86
PPFIA2-220ENST00000550584 H2AFXP16104 143 aaPredicted RBP9.65□□□□□ -0.86
PPFIA2-220ENST00000550584 GYS2P54840 703 aa9.65□□□□□ -0.86
PPFIA2-220ENST00000550584 FBXW10Q5XX13 1052 aa9.65□□□□□ -0.86
PPFIA2-220ENST00000550584 POTEBQ6S5H4 581 aa9.65□□□□□ -0.86
PPFIA2-220ENST00000550584 DHX58Q96C10 678 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms