RNA–Protein interactions for RNA: ENST00000550436.4

SVOP-203, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-203ENST00000550436 EVX2Q03828 476 aa18.4■□□□□ 0.54
SVOP-203ENST00000550436 CCDC158Q5M9N0 1113 aa18.4■□□□□ 0.54
SVOP-203ENST00000550436 WDR78Q5VTH9 848 aa18.4■□□□□ 0.54
SVOP-203ENST00000550436 TRMT44Q8IYL2 757 aaKnown RBP18.4■□□□□ 0.54
SVOP-203ENST00000550436 TRPV1Q8NER1 839 aa18.4■□□□□ 0.54
SVOP-203ENST00000550436 NPLOC4Q8TAT6 608 aa18.4■□□□□ 0.54
SVOP-203ENST00000550436 EDC3Q96F86 508 aaKnown RBP18.4■□□□□ 0.54
SVOP-203ENST00000550436 FAM161BQ96MY7 647 aa18.4■□□□□ 0.54
SVOP-203ENST00000550436 SENP6Q9GZR1 1112 aaPredicted RBP18.4■□□□□ 0.54
SVOP-203ENST00000550436 CCDC8Q9H0W5 538 aaPredicted RBP18.4■□□□□ 0.54
SVOP-203ENST00000550436 GPR108Q9NPR9 543 aa18.4■□□□□ 0.54
SVOP-203ENST00000550436 DBNLQ9UJU6 430 aaKnown RBP18.4■□□□□ 0.54
SVOP-203ENST00000550436 HLA-DOAP06340 250 aa18.39■□□□□ 0.53
SVOP-203ENST00000550436 OS9Q13438 667 aaPredicted RBP18.39■□□□□ 0.53
SVOP-203ENST00000550436 CATSPERGQ6ZRH7 1159 aa18.39■□□□□ 0.53
SVOP-203ENST00000550436 FEZ1Q99689 392 aa18.39■□□□□ 0.53
SVOP-203ENST00000550436 CWC22Q9HCG8 908 aaKnown RBP18.39■□□□□ 0.53
SVOP-203ENST00000550436 GINM1Q9NU53 330 aa18.39■□□□□ 0.53
SVOP-203ENST00000550436 RABGAP1Q9Y3P9 1069 aa18.39■□□□□ 0.53
SVOP-203ENST00000550436 USP17L15C9J2P7 530 aa18.38■□□□□ 0.53
SVOP-203ENST00000550436 USP17L13C9JLJ4 530 aa18.38■□□□□ 0.53
SVOP-203ENST00000550436 USP17L11C9JVI0 530 aa18.38■□□□□ 0.53
SVOP-203ENST00000550436 USP17L18D6R9N7 530 aa18.38■□□□□ 0.53
SVOP-203ENST00000550436 USP17L22D6RA61 530 aa18.38■□□□□ 0.53
SVOP-203ENST00000550436 USP17L17D6RBQ6 530 aa18.38■□□□□ 0.53
SVOP-203ENST00000550436 USP17L19D6RCP7 530 aa18.38■□□□□ 0.53
SVOP-203ENST00000550436 USP17L20D6RJB6 530 aa18.38■□□□□ 0.53
SVOP-203ENST00000550436 SURF6O75683 361 aaKnown RBP18.38■□□□□ 0.53
SVOP-203ENST00000550436 PTPREP23469 700 aa18.38■□□□□ 0.53
SVOP-203ENST00000550436 CYP2C19P33261 490 aa18.38■□□□□ 0.53
SVOP-203ENST00000550436 USP17L24Q0WX57 530 aa18.38■□□□□ 0.53
SVOP-203ENST00000550436 RAB3GAP1Q15042 981 aa18.38■□□□□ 0.53
SVOP-203ENST00000550436 TATDN1Q6P1N9 297 aa18.38■□□□□ 0.53
SVOP-203ENST00000550436 SSH3Q8TE77 659 aa18.38■□□□□ 0.53
SVOP-203ENST00000550436 C12orf42Q96LP6 360 aa18.38■□□□□ 0.53
SVOP-203ENST00000550436 GUCD1Q96NT3 240 aa18.38■□□□□ 0.53
SVOP-203ENST00000550436 ANTXR1Q9H6X2 564 aa18.38■□□□□ 0.53
SVOP-203ENST00000550436 DNAH12Q6ZR08 3092 aa18.37■□□□□ 0.53
SVOP-203ENST00000550436 IDH1O75874 414 aaKnown RBP18.37■□□□□ 0.53
SVOP-203ENST00000550436 RLBP1P12271 317 aa18.37■□□□□ 0.53
SVOP-203ENST00000550436 VCAM1P19320 739 aa18.37■□□□□ 0.53
SVOP-203ENST00000550436 CNGA1P29973 690 aa18.37■□□□□ 0.53
SVOP-203ENST00000550436 GUCY1A2P33402 732 aa18.37■□□□□ 0.53
SVOP-203ENST00000550436 ATP8B2P98198 1209 aa18.37■□□□□ 0.53
SVOP-203ENST00000550436 FTSJ3Q8IY81 847 aaKnown RBP18.37■□□□□ 0.53
SVOP-203ENST00000550436 MAGEB6Q8N7X4 407 aa18.37■□□□□ 0.53
SVOP-203ENST00000550436 EAF2Q96CJ1 260 aaPredicted RBP18.37■□□□□ 0.53
SVOP-203ENST00000550436 COL25A1Q9BXS0 654 aaPredicted RBP18.37■□□□□ 0.53
SVOP-203ENST00000550436 SLC15A5A6NIM6 579 aa18.36■□□□□ 0.53
SVOP-203ENST00000550436 POTEB2H3BUK9 544 aa18.36■□□□□ 0.53
SVOP-203ENST00000550436 USP5P45974 858 aa18.36■□□□□ 0.53
SVOP-203ENST00000550436 PLCD1P51178 756 aa18.36■□□□□ 0.53
SVOP-203ENST00000550436 MFSD14CQ5VZR4 134 aa18.36■□□□□ 0.53
SVOP-203ENST00000550436 ANO1Q5XXA6 986 aa18.36■□□□□ 0.53
SVOP-203ENST00000550436 GTF3C2Q8WUA4 911 aaPredicted RBP18.36■□□□□ 0.53
SVOP-203ENST00000550436 ZNF512BQ96KM6 892 aaPredicted RBP18.36■□□□□ 0.53
SVOP-203ENST00000550436 DDX20Q9UHI6 824 aaKnown RBP18.36■□□□□ 0.53
SVOP-203ENST00000550436 SPDYE16A6NNV3 312 aaPredicted RBP18.35■□□□□ 0.53
SVOP-203ENST00000550436 SHMT1P34896 483 aa18.35■□□□□ 0.53
SVOP-203ENST00000550436 ATP2B2Q01814 1243 aa18.35■□□□□ 0.53
SVOP-203ENST00000550436 ABCB5Q2M3G0 1257 aa18.35■□□□□ 0.53
SVOP-203ENST00000550436 GJC2Q5T442 439 aaPredicted RBP18.35■□□□□ 0.53
SVOP-203ENST00000550436 KIAA1683Q9H0B3 1180 aa18.35■□□□□ 0.53
SVOP-203ENST00000550436 RPAP3Q9H6T3 665 aaPredicted RBP18.35■□□□□ 0.53
SVOP-203ENST00000550436 SERPINB13Q9UIV8 391 aa18.35■□□□□ 0.53
SVOP-203ENST00000550436 RLFQ13129 1914 aa18.35■□□□□ 0.53
SVOP-203ENST00000550436 LTBP2Q14767 1821 aa18.35■□□□□ 0.53
SVOP-203ENST00000550436 IGHA2P01877 340 aa18.34■□□□□ 0.53
SVOP-203ENST00000550436 RTP1P59025 263 aa18.34■□□□□ 0.53
SVOP-203ENST00000550436 CCNA1P78396 465 aa18.34■□□□□ 0.53
SVOP-203ENST00000550436 GRB14Q14449 540 aa18.34■□□□□ 0.53
SVOP-203ENST00000550436 SEPT2Q15019 361 aa18.34■□□□□ 0.53
SVOP-203ENST00000550436 CERKLQ49MI3 558 aaPredicted RBP18.34■□□□□ 0.53
SVOP-203ENST00000550436 ITPRIPQ8IWB1 547 aa18.34■□□□□ 0.53
SVOP-203ENST00000550436 RCAN3Q9UKA8 241 aa18.34■□□□□ 0.53
SVOP-203ENST00000550436 SMCHD1A6NHR9 2005 aa18.33■□□□□ 0.53
SVOP-203ENST00000550436 A0A1W2PRG0 241 aa18.33■□□□□ 0.52
SVOP-203ENST00000550436 HOXC6P09630 235 aa18.33■□□□□ 0.52
SVOP-203ENST00000550436 KIAA1755Q5JYT7 1200 aa18.33■□□□□ 0.52
SVOP-203ENST00000550436 LPAR1Q92633 364 aa18.33■□□□□ 0.52
SVOP-203ENST00000550436 YTHDC1Q96MU7 727 aaKnown RBP18.33■□□□□ 0.52
SVOP-203ENST00000550436 LBHD1Q9BQE6 289 aaPredicted RBP18.33■□□□□ 0.52
SVOP-203ENST00000550436 UNC80Q8N2C7 3258 aa18.33■□□□□ 0.52
SVOP-203ENST00000550436 LAMA2P24043 3122 aaKnown RBP18.32■□□□□ 0.52
SVOP-203ENST00000550436 GLRX3O76003 335 aaKnown RBP18.32■□□□□ 0.52
SVOP-203ENST00000550436 CYBAP13498 195 aa18.32■□□□□ 0.52
SVOP-203ENST00000550436 PRAMEF19Q5SWL8 479 aa18.32■□□□□ 0.52
SVOP-203ENST00000550436 C9orf50Q5SZB4 431 aa18.32■□□□□ 0.52
SVOP-203ENST00000550436 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.32■□□□□ 0.52
SVOP-203ENST00000550436 PANK1Q8TE04 598 aa18.32■□□□□ 0.52
SVOP-203ENST00000550436 MOV10L1Q9BXT6 1211 aaKnown RBP18.32■□□□□ 0.52
SVOP-203ENST00000550436 EHD4Q9H223 541 aa18.32■□□□□ 0.52
SVOP-203ENST00000550436 ATP11BQ9Y2G3 1177 aa18.32■□□□□ 0.52
SVOP-203ENST00000550436 NOP58Q9Y2X3 529 aaKnown RBP18.32■□□□□ 0.52
SVOP-203ENST00000550436 COBLO75128 1261 aa18.31■□□□□ 0.52
SVOP-203ENST00000550436 USP14P54578 494 aa18.31■□□□□ 0.52
SVOP-203ENST00000550436 SHHQ15465 462 aa18.31■□□□□ 0.52
SVOP-203ENST00000550436 LBX2Q6XYB7 198 aa18.31■□□□□ 0.52
SVOP-203ENST00000550436 RIOK1Q9BRS2 568 aaKnown RBP18.31■□□□□ 0.52
SVOP-203ENST00000550436 IVNS1ABPQ9Y6Y0 642 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms