RNA–Protein interactions for RNA: ENST00000549258.5

SLC38A2-208, Transcript of solute carrier family 38 member 2, human

TSL 2

Gene SLC38A2, Length 4,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A2-208	ENST00000549258	SPTLC2	O15270	562 aa		4.6	□□□□□ -1.67
SLC38A2-208	ENST00000549258	SKAP2	O75563	359 aa	Predicted RBP	4.6	□□□□□ -1.67
SLC38A2-208	ENST00000549258	VIL1	P09327	827 aa	Known RBP	4.6	□□□□□ -1.67
SLC38A2-208	ENST00000549258	CCDC159	P0C7I6	412 aa		4.6	□□□□□ -1.67
SLC38A2-208	ENST00000549258	NAA25	Q14CX7	972 aa		4.6	□□□□□ -1.67
SLC38A2-208	ENST00000549258	FAM98C	Q17RN3	349 aa	Known RBP	4.6	□□□□□ -1.67
SLC38A2-208	ENST00000549258	MAP7D1	Q3KQU3	841 aa		4.6	□□□□□ -1.67
SLC38A2-208	ENST00000549258		Q4G0T1	1027 aa		4.6	□□□□□ -1.67
SLC38A2-208	ENST00000549258	TTC39B	Q5VTQ0	682 aa	Predicted RBP	4.6	□□□□□ -1.67
SLC38A2-208	ENST00000549258	CPLX2	Q6PUV4	134 aa	Known RBP	4.6	□□□□□ -1.67
SLC38A2-208	ENST00000549258	GTF3C6	Q969F1	213 aa		4.6	□□□□□ -1.67
SLC38A2-208	ENST00000549258	GSDMA	Q96QA5	445 aa		4.6	□□□□□ -1.67
SLC38A2-208	ENST00000549258	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
SLC38A2-208	ENST00000549258	RBSN	Q9H1K0	784 aa		4.6	□□□□□ -1.67
SLC38A2-208	ENST00000549258	ZNF304	Q9HCX3	659 aa		4.6	□□□□□ -1.67
SLC38A2-208	ENST00000549258	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.6	□□□□□ -1.67
SLC38A2-208	ENST00000549258	SMG1	Q96Q15	3661 aa	Known RBP	4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	SOCS7	O14512	581 aa		4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	TBCA	O75347	108 aa	Known RBP	4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	TMEM62	Q0P6H9	643 aa		4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	PTPRO	Q16827	1216 aa		4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	ZNF397	Q8NF99	534 aa	Predicted RBP	4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	ZFPM2	Q8WW38	1151 aa		4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	ZNF512B	Q96KM6	892 aa	Predicted RBP	4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	ZMAT2	Q96NC0	199 aa	Known RBP	4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	XPO4	Q9C0E2	1151 aa	Known RBP	4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	HELLS	Q9NRZ9	838 aa		4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	MRGBP	Q9NV56	204 aa		4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	NLRP2	Q9NX02	1062 aa		4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	SSX2IP	Q9Y2D8	614 aa		4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	LY75	O60449	1722 aa		4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	CTIF	O43310	598 aa	Known RBP	4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	MTRF1	O75570	445 aa	Known RBP	4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	HOXD10	P28358	340 aa		4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	ITIH3	Q06033	890 aa		4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	RABL6	Q3YEC7	729 aa	Predicted RBP	4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	NAA16	Q6N069	864 aa	Predicted RBP	4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	CWC27	Q6UX04	472 aa	Known RBP	4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	IQCA1	Q86XH1	822 aa		4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	GBP7	Q8N8V2	638 aa	Predicted RBP	4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.59	□□□□□ -1.67	5e-11	■■■■■ 38.3
SLC38A2-208	ENST00000549258	PDLIM2	Q96JY6	352 aa		4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	AS3MT	Q9HBK9	375 aa		4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	SPO11	Q9Y5K1	396 aa		4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	NWD2	Q9ULI1	1742 aa		4.59	□□□□□ -1.67
SLC38A2-208	ENST00000549258	HSPA1A	P0DMV8	641 aa	Known RBP	4.59	□□□□□ -1.68
SLC38A2-208	ENST00000549258	HSPA1B	P0DMV9	641 aa	Known RBP	4.59	□□□□□ -1.68
SLC38A2-208	ENST00000549258	WTAP	Q15007	396 aa		4.59	□□□□□ -1.68
SLC38A2-208	ENST00000549258	CCDC144B	Q3MJ40	725 aa		4.59	□□□□□ -1.68
SLC38A2-208	ENST00000549258	MTHFD1L	Q6UB35	978 aa		4.59	□□□□□ -1.68
SLC38A2-208	ENST00000549258	ARHGAP22	Q7Z5H3	698 aa		4.59	□□□□□ -1.68
SLC38A2-208	ENST00000549258	RPAP2	Q8IXW5	612 aa	Predicted RBP	4.59	□□□□□ -1.68
SLC38A2-208	ENST00000549258	LARGE2	Q8N3Y3	721 aa		4.59	□□□□□ -1.68
SLC38A2-208	ENST00000549258	TCP11	Q8WWU5	503 aa		4.59	□□□□□ -1.68
SLC38A2-208	ENST00000549258	DHX38	Q92620	1227 aa	Known RBP	4.59	□□□□□ -1.68
SLC38A2-208	ENST00000549258	ACSBG1	Q96GR2	724 aa		4.59	□□□□□ -1.68
SLC38A2-208	ENST00000549258	ANTXR1	Q9H6X2	564 aa		4.59	□□□□□ -1.68
SLC38A2-208	ENST00000549258	PDRG1	Q9NUG6	133 aa		4.59	□□□□□ -1.68
SLC38A2-208	ENST00000549258	HOXC10	Q9NYD6	342 aa		4.59	□□□□□ -1.68
SLC38A2-208	ENST00000549258	COL14A1	Q05707	1796 aa	Known RBP	4.59	□□□□□ -1.68
SLC38A2-208	ENST00000549258	CEMIP	Q8WUJ3	1361 aa		4.59	□□□□□ -1.68
SLC38A2-208	ENST00000549258	NDUFB5	O43674	189 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	IBSP	P21815	317 aa	Predicted RBP	4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	TMPO	P42166	694 aa	Known RBP	4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	SNX32	Q86XE0	403 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	ERC1	Q8IUD2	1116 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	KCNN1	Q92952	543 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	EXOC4	Q96A65	974 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	SPDL1	Q96EA4	605 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	SPATA17	Q96L03	361 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	IER2	Q9BTL4	223 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	BRD8	Q9H0E9	1235 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	PHAX	Q9H814	394 aa	Known RBP	4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	USP16	Q9Y5T5	823 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	IVNS1ABP	Q9Y6Y0	642 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	UBR3	Q6ZT12	1888 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	NBPF26	B4DH59	902 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	SGSM2	O43147	1006 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	OPA1	O60313	960 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	VIM	P08670	466 aa	Known RBP	4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	SCG2	P13521	617 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	FKBP5	Q13451	457 aa	Predicted RBP	4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	SYCP1	Q15431	976 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	SKIV2L	Q15477	1246 aa	Known RBP	4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	NBPF14	Q5TI25	921 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	TADA2B	Q86TJ2	420 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	SLC7A5P1	Q8MH63	180 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	NBPF15	Q8N660	670 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	GSDMB	Q8TAX9	411 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	GIMAP1	Q8WWP7	306 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	IP6K1	Q92551	441 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	IL17RA	Q96F46	866 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	EPAS1	Q99814	870 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	C2orf49	Q9BVC5	232 aa	Predicted RBP	4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	ATP6V0A2	Q9Y487	856 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	TNRC6C	Q9HCJ0	1690 aa	Known RBP	4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258		H0Y3Z8	333 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258		M0R2C6	588 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	ATF3	P18847	181 aa		4.58	□□□□□ -1.68
SLC38A2-208	ENST00000549258	LMAN1	P49257	510 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms