RNA–Protein interactions for RNA: ENST00000549094.1

SMPDL3B-206, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 5 BASIC

Gene SMPDL3B, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-206ENST00000549094 MICU3Q86XE3 530 aa15.3■□□□□ 0.04
SMPDL3B-206ENST00000549094 MSL3Q8N5Y2 521 aaKnown RBP15.3■□□□□ 0.04
SMPDL3B-206ENST00000549094 ZBTB38Q8NAP3 1195 aaPredicted RBP15.3■□□□□ 0.04
SMPDL3B-206ENST00000549094 SYT17Q9BSW7 474 aa15.3■□□□□ 0.04
SMPDL3B-206ENST00000549094 MTA3Q9BTC8 594 aa15.3■□□□□ 0.04
SMPDL3B-206ENST00000549094 NYXQ9GZU5 481 aa15.3■□□□□ 0.04
SMPDL3B-206ENST00000549094 FOXP1Q9H334 677 aaPredicted RBP15.3■□□□□ 0.04
SMPDL3B-206ENST00000549094 PSD3Q9NYI0 1048 aa15.3■□□□□ 0.04
SMPDL3B-206ENST00000549094 DOCK2Q92608 1830 aa15.3■□□□□ 0.04
SMPDL3B-206ENST00000549094 MYO5AQ9Y4I1 1855 aaKnown RBP15.3■□□□□ 0.04
SMPDL3B-206ENST00000549094 CDHR2Q9BYE9 1310 aa15.3■□□□□ 0.04
SMPDL3B-206ENST00000549094 TULP2O00295 520 aa15.29■□□□□ 0.04
SMPDL3B-206ENST00000549094 SEMA3EO15041 775 aa15.29■□□□□ 0.04
SMPDL3B-206ENST00000549094 ERLIN1O75477 346 aa15.29■□□□□ 0.04
SMPDL3B-206ENST00000549094 EIF3JO75822 258 aaKnown RBP15.29■□□□□ 0.04
SMPDL3B-206ENST00000549094 UQCRFS1P1P0C7P4 283 aa15.29■□□□□ 0.04
SMPDL3B-206ENST00000549094 IFNAR1P17181 557 aa15.29■□□□□ 0.04
SMPDL3B-206ENST00000549094 PTPREP23469 700 aa15.29■□□□□ 0.04
SMPDL3B-206ENST00000549094 MDM2Q00987 491 aaPredicted RBP15.29■□□□□ 0.04
SMPDL3B-206ENST00000549094 NTRK3Q16288 839 aa15.29■□□□□ 0.04
SMPDL3B-206ENST00000549094 TPTE2Q6XPS3 522 aa15.29■□□□□ 0.04
SMPDL3B-206ENST00000549094 NBPF5PQ86XG9 351 aaPredicted RBP15.29■□□□□ 0.04
SMPDL3B-206ENST00000549094 CCDC12Q8WUD4 166 aaPredicted RBP15.29■□□□□ 0.04
SMPDL3B-206ENST00000549094 FAM89AQ96GI7 184 aa15.29■□□□□ 0.04
SMPDL3B-206ENST00000549094 AIFM3Q96NN9 605 aa15.29■□□□□ 0.04
SMPDL3B-206ENST00000549094 CLIC6Q96NY7 704 aa15.29■□□□□ 0.04
SMPDL3B-206ENST00000549094 CTAGE1Q96RT6 745 aa15.29■□□□□ 0.04
SMPDL3B-206ENST00000549094 NBPF3Q9H094 633 aa15.29■□□□□ 0.04
SMPDL3B-206ENST00000549094 LY9Q9HBG7 655 aa15.29■□□□□ 0.04
SMPDL3B-206ENST00000549094 KIF13BQ9NQT8 1826 aa15.29■□□□□ 0.04
SMPDL3B-206ENST00000549094 SEC31AO94979 1220 aaKnown RBP15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 NTSR2O95665 410 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 MMP1P03956 469 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 TUBBP07437 444 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 GTF2E1P29083 439 aaPredicted RBP15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 CDC27P30260 824 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 SARSP49591 514 aaKnown RBP15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 PDE4BQ07343 736 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 SCARF1Q14162 830 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 METTL24Q5JXM2 366 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 PPFIBP1Q86W92 1011 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 CCDC51Q96ER9 411 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 SLC26A6Q9BXS9 759 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 KRT23Q9C075 422 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 GBP3Q9H0R5 595 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 FBXO2Q9UK22 296 aaPredicted RBP15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 SLC12A7Q9Y666 1083 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 A0A1B0GTH6 734 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 CCDC196A0A1B0GTZ2 297 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 FANCGO15287 622 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 POLR3GO15318 223 aaPredicted RBP15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 KIF5CO60282 957 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 SERPINB2P05120 415 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 CSF1RP07333 972 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 MMP10P09238 476 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 SART3Q15020 963 aaKnown RBP15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 FILIP1LQ4L180 1135 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 TOGARAM2Q6ZUX3 1019 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 SRGAP1Q7Z6B7 1085 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 FAM177A1Q8N128 213 aaPredicted RBP15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 IGDCC4Q8TDY8 1250 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 HNRNPLLQ8WVV9 542 aaKnown RBP15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 PHKBQ93100 1093 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 EXOC4Q96A65 974 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 WDR24Q96S15 920 aa15.28■□□□□ 0.04
SMPDL3B-206ENST00000549094 UTRNP46939 3433 aa15.27■□□□□ 0.04
SMPDL3B-206ENST00000549094 GOLGB1Q14789 3259 aaKnown RBP15.27■□□□□ 0.04
SMPDL3B-206ENST00000549094 B4E1Z4 1266 aa15.27■□□□□ 0.03
SMPDL3B-206ENST00000549094 POLRMTO00411 1230 aaKnown RBP15.27■□□□□ 0.03
SMPDL3B-206ENST00000549094 RANBP6O60518 1105 aaKnown RBP15.27■□□□□ 0.03
SMPDL3B-206ENST00000549094 BMP15O95972 392 aa15.27■□□□□ 0.03
SMPDL3B-206ENST00000549094 APPP05067 770 aa15.27■□□□□ 0.03
SMPDL3B-206ENST00000549094 MCAMP43121 646 aa15.27■□□□□ 0.03
SMPDL3B-206ENST00000549094 CHMP4BP1P59074 171 aa15.27■□□□□ 0.03
SMPDL3B-206ENST00000549094 IRX5P78411 483 aaPredicted RBP15.27■□□□□ 0.03
SMPDL3B-206ENST00000549094 DDR1Q08345 913 aa15.27■□□□□ 0.03
SMPDL3B-206ENST00000549094 SLC9C2Q5TAH2 1124 aa15.27■□□□□ 0.03
SMPDL3B-206ENST00000549094 DHX58Q96C10 678 aa15.27■□□□□ 0.03
SMPDL3B-206ENST00000549094 PARD6BQ9BYG5 372 aa15.27■□□□□ 0.03
SMPDL3B-206ENST00000549094 SYNRGQ9UMZ2 1314 aa15.27■□□□□ 0.03
SMPDL3B-206ENST00000549094 IRS4O14654 1257 aaPredicted RBP15.26■□□□□ 0.03
SMPDL3B-206ENST00000549094 DEXIO95424 95 aa15.26■□□□□ 0.03
SMPDL3B-206ENST00000549094 BMP6P22004 513 aa15.26■□□□□ 0.03
SMPDL3B-206ENST00000549094 HNRNPH2P55795 449 aaKnown RBP15.26■□□□□ 0.03
SMPDL3B-206ENST00000549094 GOLGA8FQ08AF8 430 aa15.26■□□□□ 0.03
SMPDL3B-206ENST00000549094 GOLGA8DPQ0D2H9 430 aa15.26■□□□□ 0.03
SMPDL3B-206ENST00000549094 NR1I3Q14994 352 aa15.26■□□□□ 0.03
SMPDL3B-206ENST00000549094 FOXP4Q8IVH2 680 aaPredicted RBP15.26■□□□□ 0.03
SMPDL3B-206ENST00000549094 DIS3L2Q8IYB7 885 aaKnown RBP15.26■□□□□ 0.03
SMPDL3B-206ENST00000549094 STK11IPQ8N1F8 1099 aa15.26■□□□□ 0.03
SMPDL3B-206ENST00000549094 CNBD1Q8NA66 436 aa15.26■□□□□ 0.03
SMPDL3B-206ENST00000549094 AIDAQ96BJ3 306 aa15.26■□□□□ 0.03
SMPDL3B-206ENST00000549094 ACBD3Q9H3P7 528 aa15.26■□□□□ 0.03
SMPDL3B-206ENST00000549094 SERTAD1Q9UHV2 236 aa15.26■□□□□ 0.03
SMPDL3B-206ENST00000549094 SRPRBQ9Y5M8 271 aaKnown RBP15.26■□□□□ 0.03
SMPDL3B-206ENST00000549094 ITIH6Q6UXX5 1313 aa15.26■□□□□ 0.03
SMPDL3B-206ENST00000549094 IFIT3O14879 490 aaKnown RBP15.25■□□□□ 0.03
SMPDL3B-206ENST00000549094 PDE6AP16499 860 aa15.25■□□□□ 0.03
SMPDL3B-206ENST00000549094 ARID4AP29374 1257 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms