RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 C19orf81C9J6K1 198 aa15.07■□□□□ 0
GCN1-204ENST00000548132 GJB1P08034 283 aa15.07■□□□□ 0
GCN1-204ENST00000548132 HOXD10P28358 340 aa15.07■□□□□ 0
GCN1-204ENST00000548132 GJA8P48165 433 aa15.07■□□□□ 0
GCN1-204ENST00000548132 RRP1P56182 461 aaKnown RBP15.07■□□□□ 0
GCN1-204ENST00000548132 IRX3P78415 501 aaPredicted RBP15.07■□□□□ 0
GCN1-204ENST00000548132 TRIM32Q13049 653 aa15.07■□□□□ 0
GCN1-204ENST00000548132 PABPC4Q13310 644 aaKnown RBP eCLIP15.07■□□□□ 0
GCN1-204ENST00000548132 SEPT2Q15019 361 aa15.07■□□□□ 0
GCN1-204ENST00000548132 ZYXQ15942 572 aaKnown RBP15.07■□□□□ 0
GCN1-204ENST00000548132 KIAA1755Q5JYT7 1200 aa15.07■□□□□ 0
GCN1-204ENST00000548132 TTC6Q86TZ1 520 aa15.07■□□□□ 0
GCN1-204ENST00000548132 OTUD7AQ8TE49 926 aaPredicted RBP15.07■□□□□ 0
GCN1-204ENST00000548132 DYNLL2Q96FJ2 89 aa15.07■□□□□ 0
GCN1-204ENST00000548132 KIAA1683Q9H0B3 1180 aa15.07■□□□□ 0
GCN1-204ENST00000548132 PUS7LQ9H0K6 701 aaKnown RBP15.07■□□□□ 0
GCN1-204ENST00000548132 PORCNQ9H237 461 aa15.07■□□□□ 0
GCN1-204ENST00000548132 MCM9Q9NXL9 1143 aa15.07■□□□□ 0
GCN1-204ENST00000548132 RBPJLQ9UBG7 517 aa15.07■□□□□ 0
GCN1-204ENST00000548132 LAMA4Q16363 1823 aa15.06■□□□□ 0
GCN1-204ENST00000548132 LAMA3Q16787 3333 aa15.06■□□□□ 0
GCN1-204ENST00000548132 UBE3CQ15386 1083 aa15.06■□□□□ 0
GCN1-204ENST00000548132 ABCB5Q2M3G0 1257 aa15.06■□□□□ 0
GCN1-204ENST00000548132 CERKLQ49MI3 558 aaPredicted RBP15.06■□□□□ 0
GCN1-204ENST00000548132 USP17L2Q6R6M4 530 aa15.06■□□□□ 0
GCN1-204ENST00000548132 TRIB2Q92519 343 aa15.06■□□□□ 0
GCN1-204ENST00000548132 CHMP4BQ9H444 224 aaKnown RBP15.06■□□□□ 0
GCN1-204ENST00000548132 TMOD4Q9NZQ9 345 aa15.06■□□□□ 0
GCN1-204ENST00000548132 SPDYE16A6NNV3 312 aaPredicted RBP15.05■□□□□ -0
GCN1-204ENST00000548132 AKR1B1P15121 316 aa15.05■□□□□ -0
GCN1-204ENST00000548132 ERVK-9P63128 1117 aa15.05■□□□□ -0
GCN1-204ENST00000548132 ERVK-24P63145 666 aa15.05■□□□□ -0
GCN1-204ENST00000548132 RAB3GAP1Q15042 981 aa15.05■□□□□ -0
GCN1-204ENST00000548132 Q3C1V9 767 aa15.05■□□□□ -0
GCN1-204ENST00000548132 U2AF1L4Q8WU68 220 aaKnown RBP15.05■□□□□ -0
GCN1-204ENST00000548132 USP6NLQ92738 828 aa15.05■□□□□ -0
GCN1-204ENST00000548132 EPB41L4AQ9HCS5 686 aaPredicted RBP15.05■□□□□ -0
GCN1-204ENST00000548132 ECHDC1Q9NTX5 307 aa15.05■□□□□ -0
GCN1-204ENST00000548132 LRRC37A2A6NM11 1700 aa15.05■□□□□ -0
GCN1-204ENST00000548132 ZNFX1Q9P2E3 1918 aaKnown RBP15.05■□□□□ -0
GCN1-204ENST00000548132 MAP3K21Q5TCX8 1036 aa15.04■□□□□ -0
GCN1-204ENST00000548132 LBX2Q6XYB7 198 aa15.04■□□□□ -0
GCN1-204ENST00000548132 SIAH1Q8IUQ4 282 aa15.04■□□□□ -0
GCN1-204ENST00000548132 PI4K2BQ8TCG2 481 aa15.04■□□□□ -0
GCN1-204ENST00000548132 COA7Q96BR5 231 aa15.04■□□□□ -0
GCN1-204ENST00000548132 FEZ1Q99689 392 aa15.04■□□□□ -0
GCN1-204ENST00000548132 CRISPLD2Q9H0B8 497 aa15.04■□□□□ -0
GCN1-204ENST00000548132 RNF208Q9H0X6 261 aa15.04■□□□□ -0
GCN1-204ENST00000548132 HMGCRP04035 888 aa15.03■□□□□ -0
GCN1-204ENST00000548132 POLR3DP05423 398 aaPredicted RBP15.03■□□□□ -0
GCN1-204ENST00000548132 MNX1P50219 401 aaPredicted RBP15.03■□□□□ -0
GCN1-204ENST00000548132 UBXN2AP68543 259 aa15.03■□□□□ -0
GCN1-204ENST00000548132 C12orf60Q5U649 245 aa15.03■□□□□ -0
GCN1-204ENST00000548132 KBTBD3Q8NAB2 608 aa15.03■□□□□ -0
GCN1-204ENST00000548132 PAGR1Q9BTK6 254 aa15.03■□□□□ -0
GCN1-204ENST00000548132 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.03■□□□□ -0
GCN1-204ENST00000548132 BTBD7Q9P203 1132 aa15.03■□□□□ -0
GCN1-204ENST00000548132 LTBP2Q14767 1821 aa15.03■□□□□ -0
GCN1-204ENST00000548132 DNAH12Q6ZR08 3092 aa15.03■□□□□ -0
GCN1-204ENST00000548132 LCTP09848 1927 aa15.02■□□□□ -0
GCN1-204ENST00000548132 FARP2O94887 1054 aaPredicted RBP15.02■□□□□ -0
GCN1-204ENST00000548132 MORN1Q5T089 497 aa15.02■□□□□ -0
GCN1-204ENST00000548132 CATSPERGQ6ZRH7 1159 aa15.02■□□□□ -0
GCN1-204ENST00000548132 C16orf86Q6ZW13 317 aa15.02■□□□□ -0
GCN1-204ENST00000548132 GPR142Q7Z601 462 aa15.02■□□□□ -0
GCN1-204ENST00000548132 DIS3LQ8TF46 1054 aaKnown RBP15.02■□□□□ -0
GCN1-204ENST00000548132 OSBP2Q969R2 916 aa15.02■□□□□ -0
GCN1-204ENST00000548132 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.02■□□□□ -04e-31■■■■■ 28.2
GCN1-204ENST00000548132 RPAP3Q9H6T3 665 aaPredicted RBP15.02■□□□□ -0
GCN1-204ENST00000548132 ATP8A2Q9NTI2 1148 aa15.02■□□□□ -0
GCN1-204ENST00000548132 TAOK2Q9UL54 1235 aa15.02■□□□□ -0
GCN1-204ENST00000548132 USP17L15C9J2P7 530 aa15.01□□□□□ -0.01
GCN1-204ENST00000548132 USP17L13C9JLJ4 530 aa15.01□□□□□ -0.01
GCN1-204ENST00000548132 USP17L11C9JVI0 530 aa15.01□□□□□ -0.01
GCN1-204ENST00000548132 USP17L18D6R9N7 530 aa15.01□□□□□ -0.01
GCN1-204ENST00000548132 USP17L22D6RA61 530 aa15.01□□□□□ -0.01
GCN1-204ENST00000548132 USP17L17D6RBQ6 530 aa15.01□□□□□ -0.01
GCN1-204ENST00000548132 USP17L19D6RCP7 530 aa15.01□□□□□ -0.01
GCN1-204ENST00000548132 USP17L20D6RJB6 530 aa15.01□□□□□ -0.01
GCN1-204ENST00000548132 M0R2C6 588 aa15.01□□□□□ -0.01
GCN1-204ENST00000548132 SGPL1O95470 568 aa15.01□□□□□ -0.01
GCN1-204ENST00000548132 USP14P54578 494 aa15.01□□□□□ -0.01
GCN1-204ENST00000548132 USP17L24Q0WX57 530 aa15.01□□□□□ -0.01
GCN1-204ENST00000548132 CCL14Q16627 93 aa15.01□□□□□ -0.01
GCN1-204ENST00000548132 CTR9Q6PD62 1173 aa15.01□□□□□ -0.01
GCN1-204ENST00000548132 GPRC5AQ8NFJ5 357 aa15.01□□□□□ -0.01
GCN1-204ENST00000548132 GTF3C2Q8WUA4 911 aaPredicted RBP15.01□□□□□ -0.01
GCN1-204ENST00000548132 DEFB118Q96PH6 123 aa15.01□□□□□ -0.01
GCN1-204ENST00000548132 CRBNQ96SW2 442 aa15.01□□□□□ -0.01
GCN1-204ENST00000548132 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.01□□□□□ -0.01
GCN1-204ENST00000548132 BIN2Q9UBW5 565 aaPredicted RBP15.01□□□□□ -0.01
GCN1-204ENST00000548132 SWAP70Q9UH65 585 aa15.01□□□□□ -0.01
GCN1-204ENST00000548132 GSG1L2A8MUP6 293 aa15□□□□□ -0.01
GCN1-204ENST00000548132 USP17L12C9JPN9 530 aa15□□□□□ -0.01
GCN1-204ENST00000548132 USP17L21D6R901 530 aa15□□□□□ -0.01
GCN1-204ENST00000548132 FOXP2O15409 715 aa15□□□□□ -0.01
GCN1-204ENST00000548132 IGHA2P01877 340 aa15□□□□□ -0.01
GCN1-204ENST00000548132 CDK8P49336 464 aa15□□□□□ -0.01
GCN1-204ENST00000548132 TMEM179Q6ZVK1 233 aa15□□□□□ -0.01
GCN1-204ENST00000548132 NKX2-3Q8TAU0 364 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms