RNA–Protein interactions for RNA: ENST00000548086.2

SCN8A-205, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 1,966 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-205ENST00000548086 GLIS2Q9BZE0 524 aaPredicted RBP12.94□□□□□ -0.34
SCN8A-205ENST00000548086 ALDH8A1Q9H2A2 487 aaPredicted RBP12.94□□□□□ -0.34
SCN8A-205ENST00000548086 ZNF287Q9HBT7 754 aa12.94□□□□□ -0.34
SCN8A-205ENST00000548086 PITPNM2Q9BZ72 1349 aa12.94□□□□□ -0.34
SCN8A-205ENST00000548086 KLF18A0A0U1RQI7 1052 aa12.94□□□□□ -0.34
SCN8A-205ENST00000548086 FMR1Q06787 632 aaKnown RBP eCLIP12.94□□□□□ -0.34
SCN8A-205ENST00000548086 WTAPQ15007 396 aa12.94□□□□□ -0.34
SCN8A-205ENST00000548086 MAP1SQ66K74 1059 aaPredicted RBP12.94□□□□□ -0.34
SCN8A-205ENST00000548086 RCSD1Q6JBY9 416 aa12.94□□□□□ -0.34
SCN8A-205ENST00000548086 NFXL1Q6ZNB6 911 aa12.94□□□□□ -0.34
SCN8A-205ENST00000548086 USP48Q86UV5 1035 aa12.94□□□□□ -0.34
SCN8A-205ENST00000548086 SULF1Q8IWU6 871 aa12.94□□□□□ -0.34
SCN8A-205ENST00000548086 CEP95Q96GE4 821 aa12.94□□□□□ -0.34
SCN8A-205ENST00000548086 LMBRD1Q9NUN5 540 aa12.94□□□□□ -0.34
SCN8A-205ENST00000548086 HERC5Q9UII4 1024 aaKnown RBP12.94□□□□□ -0.34
SCN8A-205ENST00000548086 CLEC11AQ9Y240 323 aa12.94□□□□□ -0.34
SCN8A-205ENST00000548086 ZDHHC9Q9Y397 364 aa12.94□□□□□ -0.34
SCN8A-205ENST00000548086 VEGFAP15692 232 aaPredicted RBP12.93□□□□□ -0.34
SCN8A-205ENST00000548086 CCT2P78371 535 aaKnown RBP12.93□□□□□ -0.34
SCN8A-205ENST00000548086 SART3Q15020 963 aaKnown RBP12.93□□□□□ -0.34
SCN8A-205ENST00000548086 ANKRD1Q15327 319 aa12.93□□□□□ -0.34
SCN8A-205ENST00000548086 RASGRP2Q7LDG7 609 aa12.93□□□□□ -0.34
SCN8A-205ENST00000548086 CCDC144CPQ8IYA2 1237 aa12.93□□□□□ -0.34
SCN8A-205ENST00000548086 NEDD1Q8NHV4 660 aa12.93□□□□□ -0.34
SCN8A-205ENST00000548086 NCOA5Q9HCD5 579 aaKnown RBP12.93□□□□□ -0.34
SCN8A-205ENST00000548086 STX8Q9UNK0 236 aa12.93□□□□□ -0.34
SCN8A-205ENST00000548086 GREB1LQ9C091 1923 aaPredicted RBP12.93□□□□□ -0.34
SCN8A-205ENST00000548086 ERICH2A1L162 156 aa12.92□□□□□ -0.34
SCN8A-205ENST00000548086 PPFIA3O75145 1194 aa12.92□□□□□ -0.34
SCN8A-205ENST00000548086 GH2P01242 217 aa12.92□□□□□ -0.34
SCN8A-205ENST00000548086 MCM2P49736 904 aa12.92□□□□□ -0.34
SCN8A-205ENST00000548086 CUL4AQ13619 759 aa12.92□□□□□ -0.34
SCN8A-205ENST00000548086 PKP1Q13835 747 aa12.92□□□□□ -0.34
SCN8A-205ENST00000548086 SEPT2Q15019 361 aa12.92□□□□□ -0.34
SCN8A-205ENST00000548086 IFIT1BQ5T764 474 aaKnown RBP12.92□□□□□ -0.34
SCN8A-205ENST00000548086 APOA5Q6Q788 366 aa12.92□□□□□ -0.34
SCN8A-205ENST00000548086 CCDC84Q86UT8 332 aaPredicted RBP12.92□□□□□ -0.34
SCN8A-205ENST00000548086 PNMA8AQ86V59 439 aaPredicted RBP12.92□□□□□ -0.34
SCN8A-205ENST00000548086 MICU3Q86XE3 530 aa12.92□□□□□ -0.34
SCN8A-205ENST00000548086 CCDC83Q8IWF9 413 aa12.92□□□□□ -0.34
SCN8A-205ENST00000548086 PPP1R9BQ96SB3 815 aa12.92□□□□□ -0.34
SCN8A-205ENST00000548086 MTMR7Q9Y216 660 aa12.92□□□□□ -0.34
SCN8A-205ENST00000548086 GOLGA8BA8MQT2 603 aa12.92□□□□□ -0.34
SCN8A-205ENST00000548086 PDIA3P30101 505 aaKnown RBP12.92□□□□□ -0.34
SCN8A-205ENST00000548086 GUCY1A2P33402 732 aa12.92□□□□□ -0.34
SCN8A-205ENST00000548086 LIFRP42702 1097 aa12.92□□□□□ -0.34
SCN8A-205ENST00000548086 ABCB5Q2M3G0 1257 aa12.92□□□□□ -0.34
SCN8A-205ENST00000548086 FBXL16Q8N461 479 aa12.92□□□□□ -0.34
SCN8A-205ENST00000548086 HPS5Q9UPZ3 1129 aa12.92□□□□□ -0.34
SCN8A-205ENST00000548086 ATAD5Q96QE3 1844 aa12.91□□□□□ -0.34
SCN8A-205ENST00000548086 PLIN4Q96Q06 1357 aa12.91□□□□□ -0.34
SCN8A-205ENST00000548086 IGKV6D-41A0A0C4DH26 115 aa12.91□□□□□ -0.34
SCN8A-205ENST00000548086 CCDC69A6NI79 296 aa12.91□□□□□ -0.34
SCN8A-205ENST00000548086 PHF20L1A8MW92 1017 aa12.91□□□□□ -0.34
SCN8A-205ENST00000548086 TRAF5O00463 557 aa12.91□□□□□ -0.34
SCN8A-205ENST00000548086 TBC1D12O60347 775 aa12.91□□□□□ -0.34
SCN8A-205ENST00000548086 INPP5BP32019 993 aa12.91□□□□□ -0.34
SCN8A-205ENST00000548086 MAP3K10Q02779 954 aa12.91□□□□□ -0.34
SCN8A-205ENST00000548086 SCRN1Q12765 414 aa12.91□□□□□ -0.34
SCN8A-205ENST00000548086 SGMS1Q86VZ5 419 aa12.91□□□□□ -0.34
SCN8A-205ENST00000548086 ZC3H15Q8WU90 426 aaKnown RBP12.91□□□□□ -0.34
SCN8A-205ENST00000548086 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.91□□□□□ -0.34
SCN8A-205ENST00000548086 ATP2B2Q01814 1243 aa12.9□□□□□ -0.34
SCN8A-205ENST00000548086 ZNF654Q8IZM8 581 aa12.9□□□□□ -0.34
SCN8A-205ENST00000548086 LRRC47Q8N1G4 583 aaKnown RBP12.9□□□□□ -0.34
SCN8A-205ENST00000548086 NUP133Q8WUM0 1156 aa12.9□□□□□ -0.34
SCN8A-205ENST00000548086 CDCA5Q96FF9 252 aa12.9□□□□□ -0.34
SCN8A-205ENST00000548086 CCDC17Q96LX7 622 aa12.9□□□□□ -0.34
SCN8A-205ENST00000548086 TMEM47Q9BQJ4 181 aa12.9□□□□□ -0.34
SCN8A-205ENST00000548086 TCP11L1Q9NUJ3 509 aa12.9□□□□□ -0.34
SCN8A-205ENST00000548086 MTMR4Q9NYA4 1195 aa12.9□□□□□ -0.34
SCN8A-205ENST00000548086 PPP2R3BQ9Y5P8 575 aa12.9□□□□□ -0.34
SCN8A-205ENST00000548086 SLC12A7Q9Y666 1083 aa12.9□□□□□ -0.34
SCN8A-205ENST00000548086 MYH4Q9Y623 1939 aa12.9□□□□□ -0.34
SCN8A-205ENST00000548086 CAP2P40123 477 aa12.9□□□□□ -0.34
SCN8A-205ENST00000548086 EVCP57679 992 aa12.9□□□□□ -0.34
SCN8A-205ENST00000548086 MOB2Q70IA6 237 aa12.9□□□□□ -0.34
SCN8A-205ENST00000548086 ZKSCAN4Q969J2 545 aaPredicted RBP12.9□□□□□ -0.34
SCN8A-205ENST00000548086 INTS4Q96HW7 963 aaKnown RBP12.9□□□□□ -0.34
SCN8A-205ENST00000548086 CLIP2Q9UDT6 1046 aa12.9□□□□□ -0.34
SCN8A-205ENST00000548086 ZBTB21Q9ULJ3 1066 aa12.9□□□□□ -0.34
SCN8A-205ENST00000548086 DDX49Q9Y6V7 483 aaKnown RBP12.9□□□□□ -0.34
SCN8A-205ENST00000548086 CDC27P30260 824 aa12.89□□□□□ -0.35
SCN8A-205ENST00000548086 SIAH1Q8IUQ4 282 aa12.89□□□□□ -0.35
SCN8A-205ENST00000548086 GTF3C6Q969F1 213 aa12.89□□□□□ -0.35
SCN8A-205ENST00000548086 ZSCAN31Q96LW9 406 aaPredicted RBP12.89□□□□□ -0.35
SCN8A-205ENST00000548086 WRNIP1Q96S55 665 aa12.89□□□□□ -0.35
SCN8A-205ENST00000548086 MTA3Q9BTC8 594 aa12.89□□□□□ -0.35
SCN8A-205ENST00000548086 ZBTB43O43298 467 aa12.89□□□□□ -0.35
SCN8A-205ENST00000548086 PFKFB2O60825 505 aa12.89□□□□□ -0.35
SCN8A-205ENST00000548086 EEF2P13639 858 aaKnown RBP12.89□□□□□ -0.35
SCN8A-205ENST00000548086 ICA1Q05084 483 aa12.89□□□□□ -0.35
SCN8A-205ENST00000548086 TMEM179Q6ZVK1 233 aa12.89□□□□□ -0.35
SCN8A-205ENST00000548086 CDC37L1Q7L3B6 337 aa12.89□□□□□ -0.35
SCN8A-205ENST00000548086 DGKHQ86XP1 1220 aa12.89□□□□□ -0.35
SCN8A-205ENST00000548086 CMTR1Q8N1G2 835 aaKnown RBP12.89□□□□□ -0.35
SCN8A-205ENST00000548086 PNMA1Q8ND90 353 aa12.89□□□□□ -0.35
SCN8A-205ENST00000548086 ZNF274Q96GC6 653 aaPredicted RBP12.89□□□□□ -0.35
SCN8A-205ENST00000548086 KAT14Q9H8E8 782 aa12.89□□□□□ -0.35
SCN8A-205ENST00000548086 SH2B1Q9NRF2 756 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms