RNA–Protein interactions for RNA: ENST00000547706.1

RPAP3-204, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 2

Gene RPAP3, Length 420 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-204ENST00000547706 NEDD1Q8NHV4 660 aa16.72■□□□□ 0.27
RPAP3-204ENST00000547706 BRI3BPQ8WY22 251 aa16.72■□□□□ 0.27
RPAP3-204ENST00000547706 KIAA1683Q9H0B3 1180 aa16.72■□□□□ 0.27
RPAP3-204ENST00000547706 ARHGEF10LQ9HCE6 1279 aa16.72■□□□□ 0.27
RPAP3-204ENST00000547706 MYH4Q9Y623 1939 aa16.72■□□□□ 0.27
RPAP3-204ENST00000547706 SMIM22K7EJ46 135 aa16.71■□□□□ 0.27
RPAP3-204ENST00000547706 PABPC4Q13310 644 aaKnown RBP eCLIP16.71■□□□□ 0.27
RPAP3-204ENST00000547706 SEPT2Q15019 361 aa16.71■□□□□ 0.27
RPAP3-204ENST00000547706 USP17L2Q6R6M4 530 aa16.71■□□□□ 0.27
RPAP3-204ENST00000547706 C12orf42Q96LP6 360 aa16.71■□□□□ 0.27
RPAP3-204ENST00000547706 CNNM2Q9H8M5 875 aa16.71■□□□□ 0.27
RPAP3-204ENST00000547706 TMOD4Q9NZQ9 345 aa16.71■□□□□ 0.27
RPAP3-204ENST00000547706 CEP350Q5VT06 3117 aa16.7■□□□□ 0.26
RPAP3-204ENST00000547706 TRIM75PA6NK02 468 aa16.7■□□□□ 0.26
RPAP3-204ENST00000547706 TSPY3P0CV98 308 aa16.7■□□□□ 0.26
RPAP3-204ENST00000547706 TSPY8P0CW00 308 aa16.7■□□□□ 0.26
RPAP3-204ENST00000547706 PTH1RQ03431 593 aa16.7■□□□□ 0.26
RPAP3-204ENST00000547706 ICA1Q05084 483 aa16.7■□□□□ 0.26
RPAP3-204ENST00000547706 CTDSPL2Q05D32 466 aa16.7■□□□□ 0.26
RPAP3-204ENST00000547706 CCDC178Q5BJE1 867 aa16.7■□□□□ 0.26
RPAP3-204ENST00000547706 PTPN18Q99952 460 aa16.7■□□□□ 0.26
RPAP3-204ENST00000547706 LSG1Q9H089 658 aaKnown RBP16.7■□□□□ 0.26
RPAP3-204ENST00000547706 TCP11L1Q9NUJ3 509 aa16.7■□□□□ 0.26
RPAP3-204ENST00000547706 RNF186Q9NXI6 227 aa16.7■□□□□ 0.26
RPAP3-204ENST00000547706 NYAP2Q9P242 653 aa16.7■□□□□ 0.26
RPAP3-204ENST00000547706 IGKV6D-41A0A0C4DH26 115 aa16.69■□□□□ 0.26
RPAP3-204ENST00000547706 IGF2BP3O00425 579 aaKnown RBP eCLIP16.69■□□□□ 0.26
RPAP3-204ENST00000547706 REC8O95072 547 aa16.69■□□□□ 0.26
RPAP3-204ENST00000547706 HSPA1AP0DMV8 641 aaKnown RBP16.69■□□□□ 0.26
RPAP3-204ENST00000547706 HSPA1BP0DMV9 641 aaKnown RBP16.69■□□□□ 0.26
RPAP3-204ENST00000547706 MOGSQ13724 837 aa16.69■□□□□ 0.26
RPAP3-204ENST00000547706 LPAR1Q92633 364 aa16.69■□□□□ 0.26
RPAP3-204ENST00000547706 KRT23Q9C075 422 aa16.69■□□□□ 0.26
RPAP3-204ENST00000547706 AGTPBP1Q9UPW5 1226 aa16.69■□□□□ 0.26
RPAP3-204ENST00000547706 TMX2Q9Y320 296 aa16.69■□□□□ 0.26
RPAP3-204ENST00000547706 TSPY2A6NKD2 308 aa16.68■□□□□ 0.26
RPAP3-204ENST00000547706 BTBD19C9JJ37 291 aa16.68■□□□□ 0.26
RPAP3-204ENST00000547706 PRDM1O75626 825 aa16.68■□□□□ 0.26
RPAP3-204ENST00000547706 HOXA7P31268 230 aaPredicted RBP16.68■□□□□ 0.26
RPAP3-204ENST00000547706 CTCFP49711 727 aaPredicted RBP16.68■□□□□ 0.26
RPAP3-204ENST00000547706 HAND2P61296 217 aa16.68■□□□□ 0.26
RPAP3-204ENST00000547706 TFAP4Q01664 338 aa16.68■□□□□ 0.26
RPAP3-204ENST00000547706 MTMR2Q13614 643 aa16.68■□□□□ 0.26
RPAP3-204ENST00000547706 RNF20Q5VTR2 975 aa16.68■□□□□ 0.26
RPAP3-204ENST00000547706 ESR2Q92731 530 aa16.68■□□□□ 0.26
RPAP3-204ENST00000547706 MKL1Q969V6 931 aa16.68■□□□□ 0.26
RPAP3-204ENST00000547706 FEZ1Q99689 392 aa16.68■□□□□ 0.26
RPAP3-204ENST00000547706 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.68■□□□□ 0.26
RPAP3-204ENST00000547706 ZFYVE28Q9HCC9 887 aa16.68■□□□□ 0.26
RPAP3-204ENST00000547706 ANO2Q9NQ90 1003 aa16.68■□□□□ 0.26
RPAP3-204ENST00000547706 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.68■□□□□ 0.26
RPAP3-204ENST00000547706 PNMA3Q9UL41 463 aa16.68■□□□□ 0.26
RPAP3-204ENST00000547706 RANBP6O60518 1105 aaKnown RBP16.67■□□□□ 0.26
RPAP3-204ENST00000547706 TRPA1O75762 1119 aa16.67■□□□□ 0.26
RPAP3-204ENST00000547706 TTLL1O95922 423 aa16.67■□□□□ 0.26
RPAP3-204ENST00000547706 NOVP48745 357 aa16.67■□□□□ 0.26
RPAP3-204ENST00000547706 HMGCS2P54868 508 aa16.67■□□□□ 0.26
RPAP3-204ENST00000547706 TRDNQ13061 729 aa16.67■□□□□ 0.26
RPAP3-204ENST00000547706 SHROOM1Q2M3G4 852 aaPredicted RBP16.67■□□□□ 0.26
RPAP3-204ENST00000547706 GPAT2Q6NUI2 795 aa16.67■□□□□ 0.26
RPAP3-204ENST00000547706 GADL1Q6ZQY3 521 aa16.67■□□□□ 0.26
RPAP3-204ENST00000547706 CCDC84Q86UT8 332 aaPredicted RBP16.67■□□□□ 0.26
RPAP3-204ENST00000547706 STK11IPQ8N1F8 1099 aa16.67■□□□□ 0.26
RPAP3-204ENST00000547706 FAM43AQ8N2R8 423 aa16.67■□□□□ 0.26
RPAP3-204ENST00000547706 TTC14Q96N46 770 aa16.67■□□□□ 0.26
RPAP3-204ENST00000547706 NBPF3Q9H094 633 aa16.67■□□□□ 0.26
RPAP3-204ENST00000547706 MTMR4Q9NYA4 1195 aa16.67■□□□□ 0.26
RPAP3-204ENST00000547706 RBM8AQ9Y5S9 174 aaKnown RBP16.67■□□□□ 0.26
RPAP3-204ENST00000547706 PDHXO00330 501 aa16.66■□□□□ 0.26
RPAP3-204ENST00000547706 CYP21A2P08686 494 aa16.66■□□□□ 0.26
RPAP3-204ENST00000547706 EEF2P13639 858 aaKnown RBP16.66■□□□□ 0.26
RPAP3-204ENST00000547706 NECTIN1Q15223 517 aa16.66■□□□□ 0.26
RPAP3-204ENST00000547706 TAF1CQ15572 869 aaPredicted RBP16.66■□□□□ 0.26
RPAP3-204ENST00000547706 SIAH1Q8IUQ4 282 aa16.66■□□□□ 0.26
RPAP3-204ENST00000547706 TBC1D10CQ8IV04 446 aa16.66■□□□□ 0.26
RPAP3-204ENST00000547706 PARK7Q99497 189 aaKnown RBP16.66■□□□□ 0.26
RPAP3-204ENST00000547706 GOPCQ9HD26 462 aa16.66■□□□□ 0.26
RPAP3-204ENST00000547706 TOMM22Q9NS69 142 aa16.66■□□□□ 0.26
RPAP3-204ENST00000547706 OSBPP22059 807 aa16.65■□□□□ 0.26
RPAP3-204ENST00000547706 IQCA1Q86XH1 822 aa16.65■□□□□ 0.26
RPAP3-204ENST00000547706 ACER1Q8TDN7 264 aa16.65■□□□□ 0.26
RPAP3-204ENST00000547706 GTF3C2Q8WUA4 911 aaPredicted RBP16.65■□□□□ 0.26
RPAP3-204ENST00000547706 CEP95Q96GE4 821 aa16.65■□□□□ 0.26
RPAP3-204ENST00000547706 VCPKMTQ9H867 229 aa16.65■□□□□ 0.26
RPAP3-204ENST00000547706 EMILIN3Q9NT22 766 aa16.65■□□□□ 0.26
RPAP3-204ENST00000547706 TACC3Q9Y6A5 838 aa16.65■□□□□ 0.26
RPAP3-204ENST00000547706 A0A1W2PRG0 241 aa16.64■□□□□ 0.25
RPAP3-204ENST00000547706 TLR2O60603 784 aa16.64■□□□□ 0.25
RPAP3-204ENST00000547706 TSGA10IPQ3SY00 556 aa16.64■□□□□ 0.25
RPAP3-204ENST00000547706 FAM47AQ5JRC9 791 aa16.64■□□□□ 0.25
RPAP3-204ENST00000547706 RRP12Q5JTH9 1297 aaKnown RBP16.64■□□□□ 0.25
RPAP3-204ENST00000547706 NCOA7Q8NI08 942 aa16.64■□□□□ 0.25
RPAP3-204ENST00000547706 MTA3Q9BTC8 594 aa16.64■□□□□ 0.25
RPAP3-204ENST00000547706 USP17L15C9J2P7 530 aa16.63■□□□□ 0.25
RPAP3-204ENST00000547706 USP17L13C9JLJ4 530 aa16.63■□□□□ 0.25
RPAP3-204ENST00000547706 USP17L11C9JVI0 530 aa16.63■□□□□ 0.25
RPAP3-204ENST00000547706 USP17L18D6R9N7 530 aa16.63■□□□□ 0.25
RPAP3-204ENST00000547706 USP17L22D6RA61 530 aa16.63■□□□□ 0.25
RPAP3-204ENST00000547706 USP17L17D6RBQ6 530 aa16.63■□□□□ 0.25
RPAP3-204ENST00000547706 USP17L19D6RCP7 530 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms