RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 NT5DC1Q5TFE4 455 aa17.79■□□□□ 0.44
BRF1-212ENST00000547562 PKNOX2Q96KN3 472 aa17.79■□□□□ 0.44
BRF1-212ENST00000547562 CSRNP2Q9H175 543 aa17.79■□□□□ 0.44
BRF1-212ENST00000547562 SERTAD1Q9UHV2 236 aa17.79■□□□□ 0.44
BRF1-212ENST00000547562 PAXBP1Q9Y5B6 917 aa17.79■□□□□ 0.44
BRF1-212ENST00000547562 CNTNAP5Q8WYK1 1306 aa17.78■□□□□ 0.44
BRF1-212ENST00000547562 MYO1BO43795 1136 aa17.78■□□□□ 0.44
BRF1-212ENST00000547562 NMT2O60551 498 aa17.78■□□□□ 0.44
BRF1-212ENST00000547562 EARS2Q5JPH6 523 aaKnown RBP17.78■□□□□ 0.44
BRF1-212ENST00000547562 SPTY2D1Q68D10 685 aaPredicted RBP17.78■□□□□ 0.44
BRF1-212ENST00000547562 ARMCX5Q6P1M9 558 aa17.78■□□□□ 0.44
BRF1-212ENST00000547562 ZNF710Q8N1W2 664 aa17.78■□□□□ 0.44
BRF1-212ENST00000547562 CTIFO43310 598 aaKnown RBP17.78■□□□□ 0.44
BRF1-212ENST00000547562 CYP2D6P10635 497 aa17.78■□□□□ 0.44
BRF1-212ENST00000547562 PDE4BQ07343 736 aa17.78■□□□□ 0.44
BRF1-212ENST00000547562 FAM47AQ5JRC9 791 aa17.78■□□□□ 0.44
BRF1-212ENST00000547562 NYAP1Q6ZVC0 841 aa17.78■□□□□ 0.44
BRF1-212ENST00000547562 DZIP1Q86YF9 867 aaKnown RBP17.78■□□□□ 0.44
BRF1-212ENST00000547562 CCAR2Q8N163 923 aaKnown RBP17.78■□□□□ 0.44
BRF1-212ENST00000547562 CTCFLQ8NI51 663 aaPredicted RBP17.78■□□□□ 0.44
BRF1-212ENST00000547562 BRMS1Q9HCU9 246 aa17.78■□□□□ 0.44
BRF1-212ENST00000547562 MAN1B1Q9UKM7 699 aa17.78■□□□□ 0.44
BRF1-212ENST00000547562 JAG2Q9Y219 1238 aa17.78■□□□□ 0.44
BRF1-212ENST00000547562 NPHP1O15259 732 aa17.77■□□□□ 0.44
BRF1-212ENST00000547562 CBFA2T2O43439 604 aa17.77■□□□□ 0.44
BRF1-212ENST00000547562 ACTN4O43707 911 aaKnown RBP17.77■□□□□ 0.44
BRF1-212ENST00000547562 SFPQP23246 707 aaKnown RBP eCLIP17.77■□□□□ 0.44
BRF1-212ENST00000547562 SARSP49591 514 aaKnown RBP17.77■□□□□ 0.44
BRF1-212ENST00000547562 FAM182BQ5T319 152 aa17.77■□□□□ 0.44
BRF1-212ENST00000547562 KANK3Q6NY19 840 aa17.77■□□□□ 0.44
BRF1-212ENST00000547562 SERPINC1P01008 464 aa17.77■□□□□ 0.43
BRF1-212ENST00000547562 PRR29P0C7W0 189 aa17.77■□□□□ 0.43
BRF1-212ENST00000547562 UBASH3AP57075 661 aa17.77■□□□□ 0.43
BRF1-212ENST00000547562 NPY5RQ15761 445 aa17.77■□□□□ 0.43
BRF1-212ENST00000547562 CEP135Q66GS9 1140 aa17.77■□□□□ 0.43
BRF1-212ENST00000547562 USP49Q70CQ1 688 aa17.77■□□□□ 0.43
BRF1-212ENST00000547562 SRBD1Q8N5C6 995 aaKnown RBP17.77■□□□□ 0.43
BRF1-212ENST00000547562 TNFRSF25Q93038 417 aa17.77■□□□□ 0.43
BRF1-212ENST00000547562 PTPN14Q15678 1187 aa17.76■□□□□ 0.43
BRF1-212ENST00000547562 PDILTQ8N807 584 aa17.76■□□□□ 0.43
BRF1-212ENST00000547562 SMARCE1Q969G3 411 aa17.76■□□□□ 0.43
BRF1-212ENST00000547562 FANCLQ9NW38 375 aa17.76■□□□□ 0.43
BRF1-212ENST00000547562 TSPY2A6NKD2 308 aa17.76■□□□□ 0.43
BRF1-212ENST00000547562 BMP15O95972 392 aa17.76■□□□□ 0.43
BRF1-212ENST00000547562 RFC4P35249 363 aa17.76■□□□□ 0.43
BRF1-212ENST00000547562 DPF2Q92785 391 aa17.76■□□□□ 0.43
BRF1-212ENST00000547562 MCM9Q9NXL9 1143 aa17.76■□□□□ 0.43
BRF1-212ENST00000547562 ANKIB1Q9P2G1 1089 aa17.76■□□□□ 0.43
BRF1-212ENST00000547562 GRAPQ13588 217 aa17.75■□□□□ 0.43
BRF1-212ENST00000547562 MORC3Q14149 939 aa17.75■□□□□ 0.43
BRF1-212ENST00000547562 TRIML1Q8N9V2 468 aa17.75■□□□□ 0.43
BRF1-212ENST00000547562 MLKLQ8NB16 471 aa17.75■□□□□ 0.43
BRF1-212ENST00000547562 GRAPLQ8TC17 118 aaPredicted RBP17.75■□□□□ 0.43
BRF1-212ENST00000547562 TRMT1Q9NXH9 659 aaKnown RBP17.75■□□□□ 0.43
BRF1-212ENST00000547562 USP21Q9UK80 565 aa17.75■□□□□ 0.43
BRF1-212ENST00000547562 IGSF3O75054 1194 aa17.74■□□□□ 0.43
BRF1-212ENST00000547562 CFAP100Q494V2 611 aa17.74■□□□□ 0.43
BRF1-212ENST00000547562 RCSD1Q6JBY9 416 aa17.74■□□□□ 0.43
BRF1-212ENST00000547562 GRAMD1CQ8IYS0 662 aa17.74■□□□□ 0.43
BRF1-212ENST00000547562 SPATA20Q8TB22 786 aa17.74■□□□□ 0.43
BRF1-212ENST00000547562 WDR66Q8TBY9 1149 aa17.74■□□□□ 0.43
BRF1-212ENST00000547562 FERMT2Q96AC1 680 aa17.74■□□□□ 0.43
BRF1-212ENST00000547562 DACH1Q9UI36 760 aa17.74■□□□□ 0.43
BRF1-212ENST00000547562 LEMD3Q9Y2U8 911 aa17.74■□□□□ 0.43
BRF1-212ENST00000547562 WNT7AO00755 349 aa17.74■□□□□ 0.43
BRF1-212ENST00000547562 LDHBP07195 334 aaKnown RBP17.74■□□□□ 0.43
BRF1-212ENST00000547562 USP17L8P0C7I0 530 aa17.74■□□□□ 0.43
BRF1-212ENST00000547562 KCNJ6P48051 423 aa17.74■□□□□ 0.43
BRF1-212ENST00000547562 TRAPPC3LQ5T215 181 aa17.74■□□□□ 0.43
BRF1-212ENST00000547562 MKRN1Q9UHC7 482 aaKnown RBP17.74■□□□□ 0.43
BRF1-212ENST00000547562 NRDCO43847 1150 aa17.73■□□□□ 0.43
BRF1-212ENST00000547562 SCG2P13521 617 aa17.73■□□□□ 0.43
BRF1-212ENST00000547562 CCDC112Q8NEF3 446 aa17.73■□□□□ 0.43
BRF1-212ENST00000547562 NFIXQ14938 502 aa17.73■□□□□ 0.43
BRF1-212ENST00000547562 PFKFB3Q16875 520 aaPredicted RBP17.73■□□□□ 0.43
BRF1-212ENST00000547562 NOM1Q5C9Z4 860 aaKnown RBP17.73■□□□□ 0.43
BRF1-212ENST00000547562 C12orf60Q5U649 245 aa17.73■□□□□ 0.43
BRF1-212ENST00000547562 E4F1Q66K89 784 aaPredicted RBP17.73■□□□□ 0.43
BRF1-212ENST00000547562 VSTM4Q8IW00 320 aa17.73■□□□□ 0.43
BRF1-212ENST00000547562 ZNF592Q92610 1267 aa17.73■□□□□ 0.43
BRF1-212ENST00000547562 EPSTI1Q96J88 318 aa17.73■□□□□ 0.43
BRF1-212ENST00000547562 NAV1Q8NEY1 1877 aa17.73■□□□□ 0.43
BRF1-212ENST00000547562 A0A087X0B3 334 aa17.72■□□□□ 0.43
BRF1-212ENST00000547562 NT5C2P49902 561 aa17.72■□□□□ 0.43
BRF1-212ENST00000547562 TTC38Q5R3I4 469 aa17.72■□□□□ 0.43
BRF1-212ENST00000547562 SLC51AQ86UW1 340 aa17.72■□□□□ 0.43
BRF1-212ENST00000547562 DHX58Q96C10 678 aa17.72■□□□□ 0.43
BRF1-212ENST00000547562 CCDC34Q96HJ3 373 aa17.72■□□□□ 0.43
BRF1-212ENST00000547562 UBAP1LF5GYI3 381 aa17.72■□□□□ 0.43
BRF1-212ENST00000547562 KIF5BP33176 963 aa17.72■□□□□ 0.43
BRF1-212ENST00000547562 USP5P45974 858 aa17.72■□□□□ 0.43
BRF1-212ENST00000547562 FMR1Q06787 632 aaKnown RBP eCLIP17.72■□□□□ 0.43
BRF1-212ENST00000547562 ZNF174Q15697 407 aa17.72■□□□□ 0.43
BRF1-212ENST00000547562 ZNF827Q17R98 1081 aa17.72■□□□□ 0.43
BRF1-212ENST00000547562 SLC4A8Q2Y0W8 1093 aa17.72■□□□□ 0.43
BRF1-212ENST00000547562 CNBD1Q8NA66 436 aa17.72■□□□□ 0.43
BRF1-212ENST00000547562 ENOX1Q8TC92 643 aaKnown RBP17.72■□□□□ 0.43
BRF1-212ENST00000547562 SYMPKQ92797 1274 aaKnown RBP17.72■□□□□ 0.43
BRF1-212ENST00000547562 XDHP47989 1333 aa17.72■□□□□ 0.43
BRF1-212ENST00000547562 SLFN14P0C7P3 912 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms