RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 ZKSCAN3Q9BRR0 538 aa16.65■□□□□ 0.26
LETMD1-209ENST00000547318 CSRNP2Q9H175 543 aa16.65■□□□□ 0.26
LETMD1-209ENST00000547318 MINDY4BA8MYZ0 360 aa16.65■□□□□ 0.26
LETMD1-209ENST00000547318 NR5A1Q13285 461 aa16.65■□□□□ 0.26
LETMD1-209ENST00000547318 TUBB2AQ13885 445 aa16.65■□□□□ 0.26
LETMD1-209ENST00000547318 ELF2Q15723 593 aa16.65■□□□□ 0.26
LETMD1-209ENST00000547318 PKN1Q16512 942 aa16.65■□□□□ 0.26
LETMD1-209ENST00000547318 KMT5BQ4FZB7 885 aa16.65■□□□□ 0.26
LETMD1-209ENST00000547318 SLC10A5Q5PT55 438 aa16.65■□□□□ 0.26
LETMD1-209ENST00000547318 CCDC51Q96ER9 411 aa16.65■□□□□ 0.26
LETMD1-209ENST00000547318 TUBB2BQ9BVA1 445 aa16.65■□□□□ 0.26
LETMD1-209ENST00000547318 ATP8A2Q9NTI2 1148 aa16.65■□□□□ 0.26
LETMD1-209ENST00000547318 INTS13Q9NVM9 706 aa16.65■□□□□ 0.26
LETMD1-209ENST00000547318 PRDM4Q9UKN5 801 aa16.65■□□□□ 0.26
LETMD1-209ENST00000547318 PPP2R2CQ9Y2T4 447 aa16.65■□□□□ 0.26
LETMD1-209ENST00000547318 MYH2Q9UKX2 1941 aa16.64■□□□□ 0.25
LETMD1-209ENST00000547318 ATP8B1O43520 1251 aa16.64■□□□□ 0.25
LETMD1-209ENST00000547318 GTF2E1P29083 439 aaPredicted RBP16.64■□□□□ 0.25
LETMD1-209ENST00000547318 TUBB4BP68371 445 aa16.64■□□□□ 0.25
LETMD1-209ENST00000547318 BMS1Q14692 1282 aaKnown RBP16.64■□□□□ 0.25
LETMD1-209ENST00000547318 NR1I3Q14994 352 aa16.64■□□□□ 0.25
LETMD1-209ENST00000547318 FILIP1LQ4L180 1135 aa16.64■□□□□ 0.25
LETMD1-209ENST00000547318 TMTC3Q6ZXV5 915 aa16.64■□□□□ 0.25
LETMD1-209ENST00000547318 ARPP21Q9UBL0 812 aaPredicted RBP16.64■□□□□ 0.25
LETMD1-209ENST00000547318 CASZ1Q86V15 1759 aa16.64■□□□□ 0.25
LETMD1-209ENST00000547318 TROAPQ12815 778 aa16.63■□□□□ 0.25
LETMD1-209ENST00000547318 SBK1Q52WX2 424 aa16.63■□□□□ 0.25
LETMD1-209ENST00000547318 CCDC178Q5BJE1 867 aa16.63■□□□□ 0.25
LETMD1-209ENST00000547318 FBXO38Q6PIJ6 1188 aa16.63■□□□□ 0.25
LETMD1-209ENST00000547318 MNS1Q8NEH6 495 aa16.63■□□□□ 0.25
LETMD1-209ENST00000547318 CTCFLQ8NI51 663 aaPredicted RBP16.63■□□□□ 0.25
LETMD1-209ENST00000547318 PKNOX2Q96KN3 472 aa16.63■□□□□ 0.25
LETMD1-209ENST00000547318 ABCF2Q9UG63 623 aa16.63■□□□□ 0.25
LETMD1-209ENST00000547318 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.63■□□□□ 0.25
LETMD1-209ENST00000547318 ITIH6Q6UXX5 1313 aa16.63■□□□□ 0.25
LETMD1-209ENST00000547318 SPDYE4A6NLX3 237 aa16.63■□□□□ 0.25
LETMD1-209ENST00000547318 CALML3P27482 149 aa16.63■□□□□ 0.25
LETMD1-209ENST00000547318 ATP2C1P98194 919 aaPredicted RBP16.63■□□□□ 0.25
LETMD1-209ENST00000547318 SPAG1Q07617 926 aa16.63■□□□□ 0.25
LETMD1-209ENST00000547318 BARGINQ6ZT62 677 aa16.63■□□□□ 0.25
LETMD1-209ENST00000547318 TC2NQ8N9U0 490 aa16.63■□□□□ 0.25
LETMD1-209ENST00000547318 UBXN4Q92575 508 aa16.63■□□□□ 0.25
LETMD1-209ENST00000547318 TNFRSF25Q93038 417 aa16.63■□□□□ 0.25
LETMD1-209ENST00000547318 CRNKL1Q9BZJ0 848 aaKnown RBP16.63■□□□□ 0.25
LETMD1-209ENST00000547318 NYXQ9GZU5 481 aa16.63■□□□□ 0.25
LETMD1-209ENST00000547318 ANKRD2Q9GZV1 360 aa16.63■□□□□ 0.25
LETMD1-209ENST00000547318 SH3GLB2Q9NR46 395 aa16.63■□□□□ 0.25
LETMD1-209ENST00000547318 COL1A1P02452 1464 aaPredicted RBP16.63■□□□□ 0.25
LETMD1-209ENST00000547318 MYH13Q9UKX3 1938 aa16.63■□□□□ 0.25
LETMD1-209ENST00000547318 SYNRGQ9UMZ2 1314 aa16.63■□□□□ 0.25
LETMD1-209ENST00000547318 TMEM232C9JQI7 657 aa16.62■□□□□ 0.25
LETMD1-209ENST00000547318 UBE2Q2LH0YL09 131 aa16.62■□□□□ 0.25
LETMD1-209ENST00000547318 FOXN1O15353 648 aa16.62■□□□□ 0.25
LETMD1-209ENST00000547318 PRR29P0C7W0 189 aa16.62■□□□□ 0.25
LETMD1-209ENST00000547318 FMR1Q06787 632 aaKnown RBP eCLIP16.62■□□□□ 0.25
LETMD1-209ENST00000547318 ARL6IP4Q66PJ3 421 aaKnown RBP16.62■□□□□ 0.25
LETMD1-209ENST00000547318 FBXO33Q7Z6M2 555 aa16.62■□□□□ 0.25
LETMD1-209ENST00000547318 OXER1Q8TDS5 423 aa16.62■□□□□ 0.25
LETMD1-209ENST00000547318 SDR42E1Q8WUS8 393 aa16.62■□□□□ 0.25
LETMD1-209ENST00000547318 RMND1Q9NWS8 449 aa16.62■□□□□ 0.25
LETMD1-209ENST00000547318 MYH14Q7Z406 1995 aaKnown RBP16.62■□□□□ 0.25
LETMD1-209ENST00000547318 AKR1B15C9JRZ8 316 aaPredicted RBP16.62■□□□□ 0.25
LETMD1-209ENST00000547318 KIF5BP33176 963 aa16.62■□□□□ 0.25
LETMD1-209ENST00000547318 GRIN1Q05586 938 aa16.62■□□□□ 0.25
LETMD1-209ENST00000547318 ITPK1Q13572 414 aa16.62■□□□□ 0.25
LETMD1-209ENST00000547318 TTC38Q5R3I4 469 aa16.62■□□□□ 0.25
LETMD1-209ENST00000547318 ADGRA1Q86SQ6 560 aa16.62■□□□□ 0.25
LETMD1-209ENST00000547318 IQUBQ8NA54 791 aa16.62■□□□□ 0.25
LETMD1-209ENST00000547318 PAGE5Q96GU1 130 aa16.62■□□□□ 0.25
LETMD1-209ENST00000547318 COL24A1Q17RW2 1714 aa16.61■□□□□ 0.25
LETMD1-209ENST00000547318 CNTNAP5Q8WYK1 1306 aa16.61■□□□□ 0.25
LETMD1-209ENST00000547318 VWA3AA6NCI4 1184 aa16.61■□□□□ 0.25
LETMD1-209ENST00000547318 SNAP23O00161 211 aa16.61■□□□□ 0.25
LETMD1-209ENST00000547318 CASQ1P31415 396 aa16.61■□□□□ 0.25
LETMD1-209ENST00000547318 DPYDQ12882 1025 aa16.61■□□□□ 0.25
LETMD1-209ENST00000547318 CUL4BQ13620 913 aa16.61■□□□□ 0.25
LETMD1-209ENST00000547318 TRIM14Q14142 442 aa16.61■□□□□ 0.25
LETMD1-209ENST00000547318 NAA30Q147X3 362 aaPredicted RBP16.61■□□□□ 0.25
LETMD1-209ENST00000547318 SPECC1Q5M775 1068 aa16.61■□□□□ 0.25
LETMD1-209ENST00000547318 CDKAL1Q5VV42 579 aa16.61■□□□□ 0.25
LETMD1-209ENST00000547318 VPS54Q9P1Q0 977 aa16.61■□□□□ 0.25
LETMD1-209ENST00000547318 CCDC88AQ3V6T2 1871 aa16.6■□□□□ 0.25
LETMD1-209ENST00000547318 CCDC175P0C221 793 aa16.6■□□□□ 0.25
LETMD1-209ENST00000547318 CTR9Q6PD62 1173 aa16.6■□□□□ 0.25
LETMD1-209ENST00000547318 PPFIBP1Q86W92 1011 aa16.6■□□□□ 0.25
LETMD1-209ENST00000547318 CNGA4Q8IV77 575 aa16.6■□□□□ 0.25
LETMD1-209ENST00000547318 DHX58Q96C10 678 aa16.6■□□□□ 0.25
LETMD1-209ENST00000547318 MINPP1Q9UNW1 487 aa16.6■□□□□ 0.25
LETMD1-209ENST00000547318 PARP3Q9Y6F1 533 aa16.6■□□□□ 0.25
LETMD1-209ENST00000547318 CNTNAP4Q9C0A0 1308 aa16.6■□□□□ 0.25
LETMD1-209ENST00000547318 MYL1P05976 194 aa16.6■□□□□ 0.25
LETMD1-209ENST00000547318 FECHP22830 423 aa16.6■□□□□ 0.25
LETMD1-209ENST00000547318 JAKMIP3Q5VZ66 844 aa16.6■□□□□ 0.25
LETMD1-209ENST00000547318 SPTY2D1Q68D10 685 aaPredicted RBP16.6■□□□□ 0.25
LETMD1-209ENST00000547318 GALNT17Q6IS24 598 aa16.6■□□□□ 0.25
LETMD1-209ENST00000547318 ANKRD20A12PQ8NF67 263 aa16.6■□□□□ 0.25
LETMD1-209ENST00000547318 SYMPKQ92797 1274 aaKnown RBP16.6■□□□□ 0.25
LETMD1-209ENST00000547318 V9GY48 417 aaPredicted RBP16.6■□□□□ 0.25
LETMD1-209ENST00000547318 TADA3O75528 432 aa16.59■□□□□ 0.25
LETMD1-209ENST00000547318 SCG2P13521 617 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms