RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 ZNF569Q5MCW4 686 aa11.65□□□□□ -0.54
SSH1-203ENST00000546433 HAUS3Q68CZ6 603 aa11.65□□□□□ -0.54
SSH1-203ENST00000546433 SNX14Q9Y5W7 946 aa11.65□□□□□ -0.54
SSH1-203ENST00000546433 TECPR2O15040 1411 aa11.65□□□□□ -0.54
SSH1-203ENST00000546433 SGSM2O43147 1006 aa11.65□□□□□ -0.54
SSH1-203ENST00000546433 ECM2O94769 699 aaPredicted RBP11.65□□□□□ -0.54
SSH1-203ENST00000546433 EPB41P11171 864 aaKnown RBP11.65□□□□□ -0.54
SSH1-203ENST00000546433 ATP2A2P16615 1042 aaKnown RBP11.65□□□□□ -0.54
SSH1-203ENST00000546433 GSTA5Q7RTV2 222 aa11.65□□□□□ -0.54
SSH1-203ENST00000546433 LZTS2Q9BRK4 669 aa11.65□□□□□ -0.54
SSH1-203ENST00000546433 GUCA1BQ9UMX6 200 aa11.65□□□□□ -0.54
SSH1-203ENST00000546433 KAT6BQ8WYB5 2073 aa11.65□□□□□ -0.54
SSH1-203ENST00000546433 MCM6Q14566 821 aa11.65□□□□□ -0.54
SSH1-203ENST00000546433 MFSD14BQ5SR56 506 aa11.65□□□□□ -0.54
SSH1-203ENST00000546433 HELBQ8NG08 1087 aaPredicted RBP11.65□□□□□ -0.54
SSH1-203ENST00000546433 TCHPQ9BT92 498 aa11.65□□□□□ -0.54
SSH1-203ENST00000546433 FRMD4BQ9Y2L6 1034 aa11.65□□□□□ -0.54
SSH1-203ENST00000546433 KIAA1524Q8TCG1 905 aa11.65□□□□□ -0.55
SSH1-203ENST00000546433 STX17P56962 302 aa11.64□□□□□ -0.55
SSH1-203ENST00000546433 FBF1Q8TES7 1133 aa11.64□□□□□ -0.55
SSH1-203ENST00000546433 NUP58Q9BVL2 599 aa11.64□□□□□ -0.55
SSH1-203ENST00000546433 KBTBD3Q8NAB2 608 aa11.64□□□□□ -0.55
SSH1-203ENST00000546433 USP40Q9NVE5 1235 aa11.64□□□□□ -0.55
SSH1-203ENST00000546433 IMPACTQ9P2X3 320 aa11.64□□□□□ -0.55
SSH1-203ENST00000546433 VWA3AA6NCI4 1184 aa11.64□□□□□ -0.55
SSH1-203ENST00000546433 EEF2P13639 858 aaKnown RBP11.64□□□□□ -0.55
SSH1-203ENST00000546433 MAP3K9P80192 1104 aa11.64□□□□□ -0.55
SSH1-203ENST00000546433 XAGE2Q96GT9 111 aa11.64□□□□□ -0.55
SSH1-203ENST00000546433 COA1Q9GZY4 146 aa11.64□□□□□ -0.55
SSH1-203ENST00000546433 RNF216Q9NWF9 866 aaPredicted RBP11.64□□□□□ -0.55
SSH1-203ENST00000546433 IBTKQ9P2D0 1353 aaPredicted RBP11.64□□□□□ -0.55
SSH1-203ENST00000546433 DKC1O60832 514 aaKnown RBP eCLIP11.64□□□□□ -0.55
SSH1-203ENST00000546433 UBXN2AP68543 259 aa11.64□□□□□ -0.55
SSH1-203ENST00000546433 MLKLQ8NB16 471 aa11.64□□□□□ -0.55
SSH1-203ENST00000546433 KIFAP3Q92845 792 aa11.64□□□□□ -0.55
SSH1-203ENST00000546433 USP19O94966 1318 aa11.64□□□□□ -0.55
SSH1-203ENST00000546433 SEMA3EO15041 775 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 FMNL1O95466 1100 aaPredicted RBP11.63□□□□□ -0.55
SSH1-203ENST00000546433 SEL1L2Q5TEA6 688 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 G2E3Q7L622 706 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 NBPF11Q86T75 865 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 ATG3Q9NT62 314 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 KCNH3Q9ULD8 1083 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 KCNQ4P56696 695 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 ATP6V0A2Q9Y487 856 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 ZNF804BA4D1E1 1349 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 TCP10L2B9ZVM9 353 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 M0QZ92 97 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 PLSCR1O15162 318 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 CALUO43852 315 aaPredicted RBP11.63□□□□□ -0.55
SSH1-203ENST00000546433 CCDC26Q8TAB7 109 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 TM6SF1Q9BZW5 370 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.63□□□□□ -0.55
SSH1-203ENST00000546433 CNTNAP4Q9C0A0 1308 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 PHLPP1O60346 1717 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 A0A1B0GVL5 298 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 B4E1Z4 1266 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 USP17L8P0C7I0 530 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 CNGA1P29973 690 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 ARID5AQ03989 594 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 CYP26C1Q6V0L0 522 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 SYT10Q6XYQ8 523 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 HDXQ7Z353 690 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 SPATA24Q86W54 205 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 CCDC50Q8IVM0 306 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 ERO1AQ96HE7 468 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 NOC4LQ9BVI4 516 aaKnown RBP11.63□□□□□ -0.55
SSH1-203ENST00000546433 CSRNP2Q9H175 543 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 LZTFL1Q9NQ48 299 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 TRIM35Q9UPQ4 493 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 LRRIQ1Q96JM4 1722 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 NEXMIFQ5QGS0 1516 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 KARSQ15046 597 aaKnown RBP11.63□□□□□ -0.55
SSH1-203ENST00000546433 C9orf131Q5VYM1 1079 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 RGS22Q8NE09 1264 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 IQCDQ96DY2 449 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 CTNND2Q9UQB3 1225 aa11.63□□□□□ -0.55
SSH1-203ENST00000546433 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.63□□□□□ -0.55
SSH1-203ENST00000546433 RAD17O75943 681 aa11.62□□□□□ -0.55
SSH1-203ENST00000546433 ZNF174Q15697 407 aa11.62□□□□□ -0.55
SSH1-203ENST00000546433 CCDC122Q5T0U0 273 aa11.62□□□□□ -0.55
SSH1-203ENST00000546433 POTEAQ6S8J7 498 aa11.62□□□□□ -0.55
SSH1-203ENST00000546433 KRT26Q7Z3Y9 468 aa11.62□□□□□ -0.55
SSH1-203ENST00000546433 MARCH10Q8NA82 808 aaPredicted RBP11.62□□□□□ -0.55
SSH1-203ENST00000546433 ATRIPQ8WXE1 791 aa11.62□□□□□ -0.55
SSH1-203ENST00000546433 COA7Q96BR5 231 aa11.62□□□□□ -0.55
SSH1-203ENST00000546433 GPAA1O43292 621 aa11.62□□□□□ -0.55
SSH1-203ENST00000546433 ATP5DP30049 168 aa11.62□□□□□ -0.55
SSH1-203ENST00000546433 CALCOCO2Q13137 446 aa11.62□□□□□ -0.55
SSH1-203ENST00000546433 LETM2Q2VYF4 491 aa11.62□□□□□ -0.55
SSH1-203ENST00000546433 KRT25Q7Z3Z0 450 aa11.62□□□□□ -0.55
SSH1-203ENST00000546433 CCDC14Q49A88 953 aa11.62□□□□□ -0.55
SSH1-203ENST00000546433 DBNDD2Q9BQY9 259 aa11.62□□□□□ -0.55
SSH1-203ENST00000546433 DSCC1Q9BVC3 393 aa11.62□□□□□ -0.55
SSH1-203ENST00000546433 EXOC7Q9UPT5 735 aa11.62□□□□□ -0.55
SSH1-203ENST00000546433 VEGFAP15692 232 aaPredicted RBP11.62□□□□□ -0.55
SSH1-203ENST00000546433 CCT6AP40227 531 aaKnown RBP11.62□□□□□ -0.55
SSH1-203ENST00000546433 CLUL1Q15846 466 aa11.62□□□□□ -0.55
SSH1-203ENST00000546433 A0A0G2JLW4 131 aa11.61□□□□□ -0.55
SSH1-203ENST00000546433 TMEM110-MUSTN1A8MSY1 372 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms