RNA–Protein interactions for RNA: ENST00000546026.1

CIT-218, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-218ENST00000546026 MYOZ2Q9NPC6 264 aa11.84□□□□□ -0.51
CIT-218ENST00000546026 TOP1P11387 765 aaKnown RBP11.83□□□□□ -0.52
CIT-218ENST00000546026 KIF5BP33176 963 aa11.83□□□□□ -0.52
CIT-218ENST00000546026 GMPSP49915 693 aaPredicted RBP11.83□□□□□ -0.52
CIT-218ENST00000546026 GNAQP50148 359 aa11.83□□□□□ -0.52
CIT-218ENST00000546026 MCTP1Q6DN14 999 aa11.83□□□□□ -0.52
CIT-218ENST00000546026 CDC37L1Q7L3B6 337 aa11.83□□□□□ -0.52
CIT-218ENST00000546026 NBPF11Q86T75 865 aa11.83□□□□□ -0.52
CIT-218ENST00000546026 ZSCAN29Q8IWY8 852 aaPredicted RBP11.83□□□□□ -0.52
CIT-218ENST00000546026 PNMA1Q8ND90 353 aa11.83□□□□□ -0.52
CIT-218ENST00000546026 TMEM47Q9BQJ4 181 aa11.83□□□□□ -0.52
CIT-218ENST00000546026 RNF26Q9BY78 433 aaPredicted RBP11.83□□□□□ -0.52
CIT-218ENST00000546026 TRIM34Q9BYJ4 488 aa11.83□□□□□ -0.52
CIT-218ENST00000546026 MTMR4Q9NYA4 1195 aa11.83□□□□□ -0.52
CIT-218ENST00000546026 DICER1Q9UPY3 1922 aaKnown RBP11.83□□□□□ -0.52
CIT-218ENST00000546026 TCP10L2B9ZVM9 353 aa11.82□□□□□ -0.52
CIT-218ENST00000546026 WNT10BO00744 389 aa11.82□□□□□ -0.52
CIT-218ENST00000546026 PRPF3O43395 683 aaKnown RBP11.82□□□□□ -0.52
CIT-218ENST00000546026 DEXIO95424 95 aa11.82□□□□□ -0.52
CIT-218ENST00000546026 AKR1B1P15121 316 aa11.82□□□□□ -0.52
CIT-218ENST00000546026 TNNI2P48788 182 aa11.82□□□□□ -0.52
CIT-218ENST00000546026 RESTQ13127 1097 aa11.82□□□□□ -0.52
CIT-218ENST00000546026 GRM4Q14833 912 aa11.82□□□□□ -0.52
CIT-218ENST00000546026 TMTC3Q6ZXV5 915 aa11.82□□□□□ -0.52
CIT-218ENST00000546026 FBXO18Q8NFZ0 1043 aa11.82□□□□□ -0.52
CIT-218ENST00000546026 C8orf76Q96K31 380 aa11.82□□□□□ -0.52
CIT-218ENST00000546026 ALG1Q9BT22 464 aa11.82□□□□□ -0.52
CIT-218ENST00000546026 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.82□□□□□ -0.52
CIT-218ENST00000546026 SLC26A6Q9BXS9 759 aa11.82□□□□□ -0.52
CIT-218ENST00000546026 HERC5Q9UII4 1024 aaKnown RBP11.82□□□□□ -0.52
CIT-218ENST00000546026 CNOT7Q9UIV1 285 aaKnown RBP11.82□□□□□ -0.52
CIT-218ENST00000546026 GJA3Q9Y6H8 435 aa11.82□□□□□ -0.52
CIT-218ENST00000546026 SIPA1L1O43166 1804 aa11.81□□□□□ -0.52
CIT-218ENST00000546026 CNTNAP1P78357 1384 aa11.81□□□□□ -0.52
CIT-218ENST00000546026 CLRN2A0PK11 232 aa11.81□□□□□ -0.52
CIT-218ENST00000546026 H7C1D1 291 aa11.81□□□□□ -0.52
CIT-218ENST00000546026 TBC1D12O60347 775 aa11.81□□□□□ -0.52
CIT-218ENST00000546026 SMARCA1P28370 1054 aa11.81□□□□□ -0.52
CIT-218ENST00000546026 AKAP17AQ02040 695 aaKnown RBP11.81□□□□□ -0.52
CIT-218ENST00000546026 FUT2Q10981 343 aa11.81□□□□□ -0.52
CIT-218ENST00000546026 CSPP1Q1MSJ5 1256 aa11.81□□□□□ -0.52
CIT-218ENST00000546026 CERKLQ49MI3 558 aaPredicted RBP11.81□□□□□ -0.52
CIT-218ENST00000546026 ATL3Q6DD88 541 aa11.81□□□□□ -0.52
CIT-218ENST00000546026 MICALL2Q8IY33 904 aa11.81□□□□□ -0.52
CIT-218ENST00000546026 GPC2Q8N158 579 aa11.81□□□□□ -0.52
CIT-218ENST00000546026 PHKBQ93100 1093 aa11.81□□□□□ -0.52
CIT-218ENST00000546026 CEP95Q96GE4 821 aa11.81□□□□□ -0.52
CIT-218ENST00000546026 LZTS2Q9BRK4 669 aa11.81□□□□□ -0.52
CIT-218ENST00000546026 DNAJC18Q9H819 358 aa11.81□□□□□ -0.52
CIT-218ENST00000546026 LMBRD1Q9NUN5 540 aa11.81□□□□□ -0.52
CIT-218ENST00000546026 RBM27Q9P2N5 1060 aaKnown RBP11.81□□□□□ -0.52
CIT-218ENST00000546026 STX8Q9UNK0 236 aa11.81□□□□□ -0.52
CIT-218ENST00000546026 MYH8P13535 1937 aa11.81□□□□□ -0.52
CIT-218ENST00000546026 TRAK2O60296 914 aa11.8□□□□□ -0.52
CIT-218ENST00000546026 TTLL1O95922 423 aa11.8□□□□□ -0.52
CIT-218ENST00000546026 MAP3K10Q02779 954 aa11.8□□□□□ -0.52
CIT-218ENST00000546026 TNFAIP1Q13829 316 aa11.8□□□□□ -0.52
CIT-218ENST00000546026 TRIM29Q14134 588 aa11.8□□□□□ -0.52
CIT-218ENST00000546026 NBPF9Q3BBW0 867 aa11.8□□□□□ -0.52
CIT-218ENST00000546026 FERMT3Q86UX7 667 aa11.8□□□□□ -0.52
CIT-218ENST00000546026 TMEM87AQ8NBN3 555 aa11.8□□□□□ -0.52
CIT-218ENST00000546026 MKL1Q969V6 931 aa11.8□□□□□ -0.52
CIT-218ENST00000546026 CSRNP1Q96S65 589 aa11.8□□□□□ -0.52
CIT-218ENST00000546026 VEZTQ9HBM0 779 aa11.8□□□□□ -0.52
CIT-218ENST00000546026 NYAP2Q9P242 653 aa11.8□□□□□ -0.52
CIT-218ENST00000546026 SBF1O95248 1867 aa11.8□□□□□ -0.52
CIT-218ENST00000546026 ZNF541Q9H0D2 1346 aa11.8□□□□□ -0.52
CIT-218ENST00000546026 GREB1LQ9C091 1923 aaPredicted RBP11.8□□□□□ -0.52
CIT-218ENST00000546026 SHTN1A0MZ66 631 aa11.79□□□□□ -0.52
CIT-218ENST00000546026 PALM3A6NDB9 673 aaPredicted RBP11.79□□□□□ -0.52
CIT-218ENST00000546026 PPFIA3O75145 1194 aa11.79□□□□□ -0.52
CIT-218ENST00000546026 XBP1P17861 261 aa11.79□□□□□ -0.52
CIT-218ENST00000546026 KRT85P78386 507 aa11.79□□□□□ -0.52
CIT-218ENST00000546026 KRT40Q6A162 431 aa11.79□□□□□ -0.52
CIT-218ENST00000546026 TMEM179Q6ZVK1 233 aa11.79□□□□□ -0.52
CIT-218ENST00000546026 BRAPQ7Z569 592 aa11.79□□□□□ -0.52
CIT-218ENST00000546026 SRBD1Q8N5C6 995 aaKnown RBP11.79□□□□□ -0.52
CIT-218ENST00000546026 KANSL2Q9H9L4 492 aa11.79□□□□□ -0.52
CIT-218ENST00000546026 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.79□□□□□ -0.52
CIT-218ENST00000546026 PGAP2Q9UHJ9 254 aa11.79□□□□□ -0.52
CIT-218ENST00000546026 MAD2L2Q9UI95 211 aa11.79□□□□□ -0.52
CIT-218ENST00000546026 V9GY48 417 aaPredicted RBP11.79□□□□□ -0.52
CIT-218ENST00000546026 MPHOSPH10O00566 681 aaKnown RBP11.78□□□□□ -0.52
CIT-218ENST00000546026 PRPF40AO75400 957 aaKnown RBP11.78□□□□□ -0.52
CIT-218ENST00000546026 PLEKHA8P1O95397 391 aa11.78□□□□□ -0.52
CIT-218ENST00000546026 PARP1P09874 1014 aaKnown RBP11.78□□□□□ -0.52
CIT-218ENST00000546026 GUCY1B3Q02153 619 aa11.78□□□□□ -0.52
CIT-218ENST00000546026 DNM1Q05193 864 aaKnown RBP11.78□□□□□ -0.52
CIT-218ENST00000546026 ABCB5Q2M3G0 1257 aa11.78□□□□□ -0.52
CIT-218ENST00000546026 KIF4BQ2VIQ3 1234 aa11.78□□□□□ -0.52
CIT-218ENST00000546026 RBM26Q5T8P6 1007 aaKnown RBP11.78□□□□□ -0.52
CIT-218ENST00000546026 CMTR1Q8N1G2 835 aaKnown RBP11.78□□□□□ -0.52
CIT-218ENST00000546026 CCDC82Q8N4S0 544 aa11.78□□□□□ -0.52
CIT-218ENST00000546026 ZNF396Q96N95 335 aaPredicted RBP11.78□□□□□ -0.52
CIT-218ENST00000546026 SCAND2PQ9GZW5 306 aaPredicted RBP11.78□□□□□ -0.52
CIT-218ENST00000546026 CABP5Q9NP86 173 aa11.78□□□□□ -0.52
CIT-218ENST00000546026 GPRC5DQ9NZD1 345 aa11.78□□□□□ -0.52
CIT-218ENST00000546026 CLIP2Q9UDT6 1046 aa11.78□□□□□ -0.52
CIT-218ENST00000546026 CFAP45Q9UL16 551 aa11.78□□□□□ -0.52
CIT-218ENST00000546026 SYNPO2Q9UMS6 1093 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms