RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 RNF41Q9H4P4 317 aaPredicted RBP24.27■■□□□ 1.48
HMGA2-211ENST00000545998 WBP1LQ9NX94 342 aa24.27■■□□□ 1.48
HMGA2-211ENST00000545998 IGKV6D-41A0A0C4DH26 115 aa24.26■■□□□ 1.47
HMGA2-211ENST00000545998 IGF2BP3O00425 579 aaKnown RBP eCLIP24.26■■□□□ 1.477e-8■■■■□ 24.2
HMGA2-211ENST00000545998 CYP21A2P08686 494 aa24.26■■□□□ 1.47
HMGA2-211ENST00000545998 TFAP4Q01664 338 aa24.26■■□□□ 1.47
HMGA2-211ENST00000545998 IFNL1Q8IU54 200 aa24.26■■□□□ 1.47
HMGA2-211ENST00000545998 CLEC10AQ8IUN9 316 aa24.26■■□□□ 1.47
HMGA2-211ENST00000545998 SIAH1Q8IUQ4 282 aa24.26■■□□□ 1.47
HMGA2-211ENST00000545998 NEDD1Q8NHV4 660 aa24.26■■□□□ 1.47
HMGA2-211ENST00000545998 ACER1Q8TDN7 264 aa24.26■■□□□ 1.47
HMGA2-211ENST00000545998 KANSL2Q9H9L4 492 aa24.26■■□□□ 1.47
HMGA2-211ENST00000545998 USP17L10C9JJH3 530 aa24.25■■□□□ 1.47
HMGA2-211ENST00000545998 TSPY3P0CV98 308 aa24.25■■□□□ 1.47
HMGA2-211ENST00000545998 TSPY8P0CW00 308 aa24.25■■□□□ 1.47
HMGA2-211ENST00000545998 ICA1Q05084 483 aa24.25■■□□□ 1.47
HMGA2-211ENST00000545998 MTMR2Q13614 643 aa24.25■■□□□ 1.47
HMGA2-211ENST00000545998 SH3D19Q5HYK7 790 aa24.25■■□□□ 1.47
HMGA2-211ENST00000545998 NEDD4P46934 1319 aa24.25■■□□□ 1.47
HMGA2-211ENST00000545998 MYH4Q9Y623 1939 aa24.25■■□□□ 1.47
HMGA2-211ENST00000545998 RANBP6O60518 1105 aaKnown RBP24.25■■□□□ 1.47
HMGA2-211ENST00000545998 TOMM22Q9NS69 142 aa24.25■■□□□ 1.47
HMGA2-211ENST00000545998 A0A1W2PRG0 241 aa24.24■■□□□ 1.47
HMGA2-211ENST00000545998 TSPY2A6NKD2 308 aa24.24■■□□□ 1.47
HMGA2-211ENST00000545998 C19orf81C9J6K1 198 aa24.24■■□□□ 1.47
HMGA2-211ENST00000545998 BTBD19C9JJ37 291 aa24.24■■□□□ 1.47
HMGA2-211ENST00000545998 HMGCS2P54868 508 aa24.24■■□□□ 1.47
HMGA2-211ENST00000545998 NECTIN1Q15223 517 aa24.24■■□□□ 1.47
HMGA2-211ENST00000545998 RRP12Q5JTH9 1297 aaKnown RBP24.24■■□□□ 1.47
HMGA2-211ENST00000545998 FASTKD5Q7L8L6 764 aaKnown RBP24.24■■□□□ 1.47
HMGA2-211ENST00000545998 NKX2-3Q8TAU0 364 aa24.24■■□□□ 1.47
HMGA2-211ENST00000545998 KIAA1683Q9H0B3 1180 aa24.24■■□□□ 1.47
HMGA2-211ENST00000545998 TAF6LQ9Y6J9 622 aa24.24■■□□□ 1.47
HMGA2-211ENST00000545998 DGKZQ13574 1117 aa24.23■■□□□ 1.47
HMGA2-211ENST00000545998 GPAT2Q6NUI2 795 aa24.23■■□□□ 1.47
HMGA2-211ENST00000545998 FAM43AQ8N2R8 423 aa24.23■■□□□ 1.47
HMGA2-211ENST00000545998 EEF2P13639 858 aaKnown RBP24.22■■□□□ 1.47
HMGA2-211ENST00000545998 NT5C2P49902 561 aa24.22■■□□□ 1.47
HMGA2-211ENST00000545998 GADL1Q6ZQY3 521 aa24.22■■□□□ 1.47
HMGA2-211ENST00000545998 PROCA1Q8NCQ7 364 aaPredicted RBP24.22■■□□□ 1.47
HMGA2-211ENST00000545998 CEP95Q96GE4 821 aa24.22■■□□□ 1.47
HMGA2-211ENST00000545998 ARHGEF10LQ9HCE6 1279 aa24.22■■□□□ 1.47
HMGA2-211ENST00000545998 RNF186Q9NXI6 227 aa24.22■■□□□ 1.47
HMGA2-211ENST00000545998 MTMR4Q9NYA4 1195 aa24.22■■□□□ 1.47
HMGA2-211ENST00000545998 REC8O95072 547 aa24.21■■□□□ 1.47
HMGA2-211ENST00000545998 OTUD7BQ6GQQ9 843 aa24.21■■□□□ 1.47
HMGA2-211ENST00000545998 ANKRD23Q86SG2 305 aa24.21■■□□□ 1.47
HMGA2-211ENST00000545998 ESR2Q92731 530 aa24.21■■□□□ 1.47
HMGA2-211ENST00000545998 FEZ1Q99689 392 aa24.21■■□□□ 1.47
HMGA2-211ENST00000545998 BEGAINQ9BUH8 593 aa24.21■■□□□ 1.47
HMGA2-211ENST00000545998 ZCCHC17Q9NP64 241 aaKnown RBP24.21■■□□□ 1.47
HMGA2-211ENST00000545998 EMILIN3Q9NT22 766 aa24.21■■□□□ 1.47
HMGA2-211ENST00000545998 TMX2Q9Y320 296 aa24.21■■□□□ 1.47
HMGA2-211ENST00000545998 SLC27A2O14975 620 aa24.2■■□□□ 1.47
HMGA2-211ENST00000545998 ALDH1A1P00352 501 aa24.2■■□□□ 1.47
HMGA2-211ENST00000545998 USP14P54578 494 aa24.2■■□□□ 1.47
HMGA2-211ENST00000545998 ZYXQ15942 572 aaKnown RBP24.2■■□□□ 1.47
HMGA2-211ENST00000545998 CREB3L3Q68CJ9 461 aa24.2■■□□□ 1.47
HMGA2-211ENST00000545998 USP17L2Q6R6M4 530 aa24.2■■□□□ 1.47
HMGA2-211ENST00000545998 CNNM2Q9H8M5 875 aa24.2■■□□□ 1.47
HMGA2-211ENST00000545998 IL17RBQ9NRM6 502 aa24.2■■□□□ 1.47
HMGA2-211ENST00000545998 SAGE1Q9NXZ1 904 aa24.2■■□□□ 1.47
HMGA2-211ENST00000545998 NYAP2Q9P242 653 aa24.2■■□□□ 1.47
HMGA2-211ENST00000545998 TRPA1O75762 1119 aa24.2■■□□□ 1.46
HMGA2-211ENST00000545998 TREML2Q5T2D2 321 aa24.2■■□□□ 1.46
HMGA2-211ENST00000545998 C12orf42Q96LP6 360 aa24.2■■□□□ 1.46
HMGA2-211ENST00000545998 KRT23Q9C075 422 aa24.2■■□□□ 1.46
HMGA2-211ENST00000545998 TMOD4Q9NZQ9 345 aa24.2■■□□□ 1.46
HMGA2-211ENST00000545998 AGTPBP1Q9UPW5 1226 aa24.2■■□□□ 1.46
HMGA2-211ENST00000545998 B4E1Z4 1266 aa24.19■■□□□ 1.46
HMGA2-211ENST00000545998 E7EWF7 191 aa24.19■■□□□ 1.46
HMGA2-211ENST00000545998 CA12O43570 354 aa24.19■■□□□ 1.46
HMGA2-211ENST00000545998 NMT2O60551 498 aa24.19■■□□□ 1.46
HMGA2-211ENST00000545998 HSPA1AP0DMV8 641 aaKnown RBP24.19■■□□□ 1.46
HMGA2-211ENST00000545998 HSPA1BP0DMV9 641 aaKnown RBP24.19■■□□□ 1.46
HMGA2-211ENST00000545998 ATP2B2Q01814 1243 aa24.19■■□□□ 1.46
HMGA2-211ENST00000545998 STOX1Q6ZVD7 989 aa24.19■■□□□ 1.46
HMGA2-211ENST00000545998 SH2D4AQ9H788 454 aa24.19■■□□□ 1.46
HMGA2-211ENST00000545998 TCP11L1Q9NUJ3 509 aa24.19■■□□□ 1.46
HMGA2-211ENST00000545998 PDHXO00330 501 aa24.18■■□□□ 1.46
HMGA2-211ENST00000545998 KDM4AO75164 1064 aa24.18■■□□□ 1.46
HMGA2-211ENST00000545998 TTLL1O95922 423 aa24.18■■□□□ 1.46
HMGA2-211ENST00000545998 NOVP48745 357 aa24.18■■□□□ 1.46
HMGA2-211ENST00000545998 MKL1Q969V6 931 aa24.18■■□□□ 1.46
HMGA2-211ENST00000545998 CFHR5Q9BXR6 569 aa24.18■■□□□ 1.46
HMGA2-211ENST00000545998 CLIP2Q9UDT6 1046 aa24.18■■□□□ 1.46
HMGA2-211ENST00000545998 SLC45A1Q9Y2W3 748 aa24.18■■□□□ 1.46
HMGA2-211ENST00000545998 EPB41L2O43491 1005 aaKnown RBP24.17■■□□□ 1.46
HMGA2-211ENST00000545998 PPP4R3BQ5MIZ7 849 aa24.17■■□□□ 1.46
HMGA2-211ENST00000545998 TRDNQ13061 729 aa24.16■■□□□ 1.46
HMGA2-211ENST00000545998 KIAA1755Q5JYT7 1200 aa24.16■■□□□ 1.46
HMGA2-211ENST00000545998 RNF20Q5VTR2 975 aa24.16■■□□□ 1.46
HMGA2-211ENST00000545998 VCPKMTQ9H867 229 aa24.16■■□□□ 1.46
HMGA2-211ENST00000545998 ZSWIM5Q9P217 1185 aa24.16■■□□□ 1.46
HMGA2-211ENST00000545998 VCAM1P19320 739 aa24.16■■□□□ 1.46
HMGA2-211ENST00000545998 SYNPO2Q9UMS6 1093 aa24.16■■□□□ 1.46
HMGA2-211ENST00000545998 FOXN1O15353 648 aa24.15■■□□□ 1.46
HMGA2-211ENST00000545998 TAF1CQ15572 869 aaPredicted RBP24.15■■□□□ 1.46
HMGA2-211ENST00000545998 NCOA7Q8NI08 942 aa24.15■■□□□ 1.46
HMGA2-211ENST00000545998 STX8Q9UNK0 236 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms