RNA–Protein interactions for RNA: ENST00000544216.7

LSM14A-203, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LSM14A, Length 3,596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-203ENST00000544216 MEX3CQ5U5Q3 659 aaKnown RBP15.88■□□□□ 0.13
LSM14A-203ENST00000544216 MAP7D2Q96T17 732 aa15.88■□□□□ 0.13
LSM14A-203ENST00000544216 KAT14Q9H8E8 782 aa15.88■□□□□ 0.13
LSM14A-203ENST00000544216 PHLPP1O60346 1717 aa15.88■□□□□ 0.13
LSM14A-203ENST00000544216 BAZ2AQ9UIF9 1905 aaKnown RBP15.88■□□□□ 0.13
LSM14A-203ENST00000544216 DDX60Q8IY21 1712 aaKnown RBP15.87■□□□□ 0.13
LSM14A-203ENST00000544216 TMEM232C9JQI7 657 aa15.87■□□□□ 0.13
LSM14A-203ENST00000544216 WNT7AO00755 349 aa15.87■□□□□ 0.13
LSM14A-203ENST00000544216 MCM7P33993 719 aa15.87■□□□□ 0.13
LSM14A-203ENST00000544216 TMTC3Q6ZXV5 915 aa15.87■□□□□ 0.13
LSM14A-203ENST00000544216 RGS22Q8NE09 1264 aa15.87■□□□□ 0.13
LSM14A-203ENST00000544216 NOL10Q9BSC4 688 aaKnown RBP15.87■□□□□ 0.13
LSM14A-203ENST00000544216 ATP8A2Q9NTI2 1148 aa15.87■□□□□ 0.13
LSM14A-203ENST00000544216 STX8Q9UNK0 236 aa15.87■□□□□ 0.13
LSM14A-203ENST00000544216 STX17P56962 302 aa15.87■□□□□ 0.13
LSM14A-203ENST00000544216 NAA30Q147X3 362 aaPredicted RBP15.87■□□□□ 0.13
LSM14A-203ENST00000544216 SPTY2D1Q68D10 685 aaPredicted RBP15.87■□□□□ 0.13
LSM14A-203ENST00000544216 HOMER1Q86YM7 354 aa15.87■□□□□ 0.13
LSM14A-203ENST00000544216 ZNF710Q8N1W2 664 aa15.87■□□□□ 0.13
LSM14A-203ENST00000544216 TGFBRAP1Q8WUH2 860 aa15.87■□□□□ 0.13
LSM14A-203ENST00000544216 NFE2L3Q9Y4A8 694 aa15.87■□□□□ 0.13
LSM14A-203ENST00000544216 BCL9LQ86UU0 1499 aa15.87■□□□□ 0.13
LSM14A-203ENST00000544216 TOP1P11387 765 aaKnown RBP15.87■□□□□ 0.13
LSM14A-203ENST00000544216 RC3H1Q5TC82 1133 aaKnown RBP15.87■□□□□ 0.13
LSM14A-203ENST00000544216 CCAR2Q8N163 923 aaKnown RBP15.87■□□□□ 0.13
LSM14A-203ENST00000544216 GPKOWQ92917 476 aaPredicted RBP eCLIP15.87■□□□□ 0.13
LSM14A-203ENST00000544216 PHF20Q9BVI0 1012 aa15.87■□□□□ 0.13
LSM14A-203ENST00000544216 IMPACTQ9P2X3 320 aa15.87■□□□□ 0.13
LSM14A-203ENST00000544216 RCAN1P53805 252 aa15.86■□□□□ 0.13
LSM14A-203ENST00000544216 GRIK5Q16478 980 aa15.86■□□□□ 0.13
LSM14A-203ENST00000544216 MAPKAPK5Q8IW41 473 aa15.86■□□□□ 0.13
LSM14A-203ENST00000544216 SLC44A5Q8NCS7 719 aa15.86■□□□□ 0.13
LSM14A-203ENST00000544216 CCDC150Q8NCX0 1101 aa15.86■□□□□ 0.13
LSM14A-203ENST00000544216 SH3RF3Q8TEJ3 882 aaPredicted RBP15.86■□□□□ 0.13
LSM14A-203ENST00000544216 RPGRQ92834 1020 aaKnown RBP15.86■□□□□ 0.13
LSM14A-203ENST00000544216 OSBPL5Q9H0X9 879 aaPredicted RBP15.86■□□□□ 0.13
LSM14A-203ENST00000544216 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.86■□□□□ 0.13
LSM14A-203ENST00000544216 V9GYY5 206 aaPredicted RBP15.86■□□□□ 0.13
LSM14A-203ENST00000544216 CBFA2T2O43439 604 aa15.86■□□□□ 0.13
LSM14A-203ENST00000544216 FUT2Q10981 343 aa15.86■□□□□ 0.13
LSM14A-203ENST00000544216 PTGDRQ13258 359 aa15.86■□□□□ 0.13
LSM14A-203ENST00000544216 TTC38Q5R3I4 469 aa15.86■□□□□ 0.13
LSM14A-203ENST00000544216 SYMPKQ92797 1274 aaKnown RBP15.86■□□□□ 0.13
LSM14A-203ENST00000544216 USP17L3A6NCW0 530 aa15.86■□□□□ 0.13
LSM14A-203ENST00000544216 USP17L4A6NCW7 530 aa15.86■□□□□ 0.13
LSM14A-203ENST00000544216 TM4SF1P30408 202 aa15.86■□□□□ 0.13
LSM14A-203ENST00000544216 USP17L1Q7RTZ2 530 aa15.86■□□□□ 0.13
LSM14A-203ENST00000544216 AMOTL1Q8IY63 956 aa15.86■□□□□ 0.13
LSM14A-203ENST00000544216 CCDC34Q96HJ3 373 aa15.86■□□□□ 0.13
LSM14A-203ENST00000544216 HSD3B7Q9H2F3 369 aa15.86■□□□□ 0.13
LSM14A-203ENST00000544216 ARPP21Q9UBL0 812 aaPredicted RBP15.86■□□□□ 0.13
LSM14A-203ENST00000544216 FAM237AA0A1B0GTK4 181 aa15.85■□□□□ 0.13
LSM14A-203ENST00000544216 FMR1Q06787 632 aaKnown RBP eCLIP15.85■□□□□ 0.13
LSM14A-203ENST00000544216 COBLO75128 1261 aa15.85■□□□□ 0.13
LSM14A-203ENST00000544216 DDAH1O94760 285 aa15.85■□□□□ 0.13
LSM14A-203ENST00000544216 ZNF444Q8N0Y2 327 aaPredicted RBP15.85■□□□□ 0.13
LSM14A-203ENST00000544216 RASGRP4Q8TDF6 673 aa15.85■□□□□ 0.13
LSM14A-203ENST00000544216 PAXBP1Q9Y5B6 917 aa15.85■□□□□ 0.13
LSM14A-203ENST00000544216 COL22A1Q8NFW1 1626 aaPredicted RBP15.85■□□□□ 0.13
LSM14A-203ENST00000544216 TSPY3P0CV98 308 aa15.85■□□□□ 0.13
LSM14A-203ENST00000544216 TSPY8P0CW00 308 aa15.85■□□□□ 0.13
LSM14A-203ENST00000544216 SCG2P13521 617 aa15.85■□□□□ 0.13
LSM14A-203ENST00000544216 CDC25AP30304 524 aa15.85■□□□□ 0.13
LSM14A-203ENST00000544216 GTF2F1P35269 517 aaKnown RBP eCLIP15.85■□□□□ 0.131e-8■□□□□ 10.2
LSM14A-203ENST00000544216 MDM2Q00987 491 aaPredicted RBP15.85■□□□□ 0.13
LSM14A-203ENST00000544216 SMYD4Q8IYR2 804 aaPredicted RBP15.85■□□□□ 0.13
LSM14A-203ENST00000544216 FAM177A1Q8N128 213 aaPredicted RBP15.85■□□□□ 0.13
LSM14A-203ENST00000544216 RASSF8Q8NHQ8 419 aa15.85■□□□□ 0.13
LSM14A-203ENST00000544216 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.85■□□□□ 0.13
LSM14A-203ENST00000544216 CHD4Q14839 1912 aa15.84■□□□□ 0.13
LSM14A-203ENST00000544216 ORC4O43929 436 aa15.84■□□□□ 0.13
LSM14A-203ENST00000544216 MTERF4Q7Z6M4 381 aaKnown RBP15.84■□□□□ 0.13
LSM14A-203ENST00000544216 STAG2Q8N3U4 1231 aa15.84■□□□□ 0.13
LSM14A-203ENST00000544216 PNMA1Q8ND90 353 aa15.84■□□□□ 0.13
LSM14A-203ENST00000544216 SAMSN1Q9NSI8 373 aaKnown RBP15.84■□□□□ 0.13
LSM14A-203ENST00000544216 A0A087X0B3 334 aa15.84■□□□□ 0.13
LSM14A-203ENST00000544216 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.84■□□□□ 0.13
LSM14A-203ENST00000544216 UFL1O94874 794 aa15.84■□□□□ 0.13
LSM14A-203ENST00000544216 PCP11498 1178 aaKnown RBP15.84■□□□□ 0.13
LSM14A-203ENST00000544216 KIF5BP33176 963 aa15.84■□□□□ 0.13
LSM14A-203ENST00000544216 KANK3Q6NY19 840 aa15.84■□□□□ 0.13
LSM14A-203ENST00000544216 PDCL2Q8N4E4 241 aa15.84■□□□□ 0.13
LSM14A-203ENST00000544216 WDR66Q8TBY9 1149 aa15.84■□□□□ 0.13
LSM14A-203ENST00000544216 CICQ96RK0 1608 aaPredicted RBP15.83■□□□□ 0.13
LSM14A-203ENST00000544216 ADAMTS3O15072 1205 aa15.83■□□□□ 0.12
LSM14A-203ENST00000544216 BAG3O95817 575 aa15.83■□□□□ 0.12
LSM14A-203ENST00000544216 GOLGA8HP0CJ92 632 aa15.83■□□□□ 0.12
LSM14A-203ENST00000544216 KIF18AQ8NI77 898 aa15.83■□□□□ 0.12
LSM14A-203ENST00000544216 BLZF1Q9H2G9 400 aa15.83■□□□□ 0.12
LSM14A-203ENST00000544216 DACH1Q9UI36 760 aa15.83■□□□□ 0.12
LSM14A-203ENST00000544216 CNTNAP5Q8WYK1 1306 aa15.83■□□□□ 0.12
LSM14A-203ENST00000544216 ACTN4O43707 911 aaKnown RBP15.83■□□□□ 0.12
LSM14A-203ENST00000544216 GRAPQ13588 217 aa15.83■□□□□ 0.12
LSM14A-203ENST00000544216 E4F1Q66K89 784 aaPredicted RBP15.83■□□□□ 0.12
LSM14A-203ENST00000544216 ZNF804AQ7Z570 1209 aa15.83■□□□□ 0.12
LSM14A-203ENST00000544216 ZNF579Q8NAF0 562 aaKnown RBP15.83■□□□□ 0.12
LSM14A-203ENST00000544216 MLKLQ8NB16 471 aa15.83■□□□□ 0.12
LSM14A-203ENST00000544216 GRAPLQ8TC17 118 aaPredicted RBP15.83■□□□□ 0.12
LSM14A-203ENST00000544216 CPVLQ9H3G5 476 aa15.83■□□□□ 0.12
LSM14A-203ENST00000544216 NID2Q14112 1375 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms