RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 CCL14Q16627 93 aa27.54■■■□□ 2
CDKN3-207ENST00000543789 CERKLQ49MI3 558 aaPredicted RBP27.54■■■□□ 2
CDKN3-207ENST00000543789 ATAD5Q96QE3 1844 aa27.54■■■□□ 2
CDKN3-207ENST00000543789 SIPA1L1O43166 1804 aa27.53■■■□□ 2
CDKN3-207ENST00000543789 CCNA1P78396 465 aa27.53■■■□□ 2
CDKN3-207ENST00000543789 ABCB5Q2M3G0 1257 aa27.53■■■□□ 2
CDKN3-207ENST00000543789 APBA2Q99767 749 aa27.53■■■□□ 2
CDKN3-207ENST00000543789 SYN1P17600 705 aa27.52■■■□□ 2
CDKN3-207ENST00000543789 CEP85Q6P2H3 762 aa27.52■■■□□ 2
CDKN3-207ENST00000543789 CATSPERGQ6ZRH7 1159 aa27.52■■■□□ 2
CDKN3-207ENST00000543789 ERC1Q8IUD2 1116 aa27.52■■■□□ 2
CDKN3-207ENST00000543789 KIAA1683Q9H0B3 1180 aa27.52■■■□□ 2
CDKN3-207ENST00000543789 CABP5Q9NP86 173 aa27.52■■■□□ 2
CDKN3-207ENST00000543789 CNMDO75829 334 aa27.51■■□□□ 1.99
CDKN3-207ENST00000543789 GLRX3O76003 335 aaKnown RBP27.51■■□□□ 1.99
CDKN3-207ENST00000543789 CCND3P30281 292 aaPredicted RBP27.51■■□□□ 1.99
CDKN3-207ENST00000543789 MAP2K5Q13163 448 aa27.51■■□□□ 1.99
CDKN3-207ENST00000543789 LHX8Q68G74 356 aa27.51■■□□□ 1.99
CDKN3-207ENST00000543789 AACSQ86V21 672 aa27.51■■□□□ 1.99
CDKN3-207ENST00000543789 EDC3Q96F86 508 aaKnown RBP27.51■■□□□ 1.99
CDKN3-207ENST00000543789 PFASO15067 1338 aa27.5■■□□□ 1.99
CDKN3-207ENST00000543789 PLCD1P51178 756 aa27.5■■□□□ 1.99
CDKN3-207ENST00000543789 ACER1Q8TDN7 264 aa27.5■■□□□ 1.99
CDKN3-207ENST00000543789 MAST2Q6P0Q8 1798 aa27.5■■□□□ 1.99
CDKN3-207ENST00000543789 COL6A1P12109 1028 aa27.49■■□□□ 1.99
CDKN3-207ENST00000543789 VCAM1P19320 739 aa27.49■■□□□ 1.99
CDKN3-207ENST00000543789 MAGEA10P43363 369 aaPredicted RBP27.49■■□□□ 1.99
CDKN3-207ENST00000543789 RIOK1Q9BRS2 568 aaKnown RBP27.49■■□□□ 1.99
CDKN3-207ENST00000543789 EXOC6BQ9Y2D4 811 aa27.49■■□□□ 1.99
CDKN3-207ENST00000543789 LAMA3Q16787 3333 aa27.49■■□□□ 1.99
CDKN3-207ENST00000543789 POLR3DP05423 398 aaPredicted RBP27.48■■□□□ 1.99
CDKN3-207ENST00000543789 SHMT1P34896 483 aa27.48■■□□□ 1.99
CDKN3-207ENST00000543789 WDR78Q5VTH9 848 aa27.48■■□□□ 1.99
CDKN3-207ENST00000543789 MFSD14CQ5VZR4 134 aa27.48■■□□□ 1.99
CDKN3-207ENST00000543789 PLXNB2O15031 1838 aa27.47■■□□□ 1.99
CDKN3-207ENST00000543789 MAGEB6P1A0A0J9YX57 407 aa27.47■■□□□ 1.99
CDKN3-207ENST00000543789 SLC15A5A6NIM6 579 aa27.47■■□□□ 1.99
CDKN3-207ENST00000543789 PTPREP23469 700 aa27.47■■□□□ 1.99
CDKN3-207ENST00000543789 HNRNPUQ00839 825 aaKnown RBP eCLIP27.47■■□□□ 1.99
CDKN3-207ENST00000543789 LBX2Q6XYB7 198 aa27.47■■□□□ 1.99
CDKN3-207ENST00000543789 SLC17A8Q8NDX2 589 aa27.47■■□□□ 1.99
CDKN3-207ENST00000543789 TTF1Q15361 905 aaPredicted RBP27.46■■□□□ 1.99
CDKN3-207ENST00000543789 HSP90AB4PQ58FF6 505 aa27.46■■□□□ 1.99
CDKN3-207ENST00000543789 GPR153Q6NV75 609 aa27.46■■□□□ 1.99
CDKN3-207ENST00000543789 GUCY1A2P33402 732 aa27.45■■□□□ 1.98
CDKN3-207ENST00000543789 LRIT3Q3SXY7 679 aa27.45■■□□□ 1.98
CDKN3-207ENST00000543789 TDHQ8IZJ6 230 aa27.45■■□□□ 1.98
CDKN3-207ENST00000543789 UBE2OQ9C0C9 1292 aaKnown RBP27.45■■□□□ 1.98
CDKN3-207ENST00000543789 RPAP3Q9H6T3 665 aaPredicted RBP27.45■■□□□ 1.98
CDKN3-207ENST00000543789 FLRT1Q9NZU1 646 aa27.45■■□□□ 1.98
CDKN3-207ENST00000543789 BTBD7Q9P203 1132 aa27.45■■□□□ 1.98
CDKN3-207ENST00000543789 IVNS1ABPQ9Y6Y0 642 aa27.45■■□□□ 1.98
CDKN3-207ENST00000543789 ATP2B2Q01814 1243 aa27.44■■□□□ 1.98
CDKN3-207ENST00000543789 GABPAQ06546 454 aa27.44■■□□□ 1.98
CDKN3-207ENST00000543789 SLC9C2Q5TAH2 1124 aa27.44■■□□□ 1.98
CDKN3-207ENST00000543789 CRNKL1Q9BZJ0 848 aaKnown RBP27.44■■□□□ 1.98
CDKN3-207ENST00000543789 IL1RAPL2Q9NP60 686 aa27.44■■□□□ 1.98
CDKN3-207ENST00000543789 SPDYE16A6NNV3 312 aaPredicted RBP27.43■■□□□ 1.98
CDKN3-207ENST00000543789 HOXC6P09630 235 aa27.43■■□□□ 1.98
CDKN3-207ENST00000543789 SEPT2Q15019 361 aa27.43■■□□□ 1.98
CDKN3-207ENST00000543789 LRRC26Q2I0M4 334 aa27.43■■□□□ 1.98
CDKN3-207ENST00000543789 RHPN1Q8TCX5 695 aa27.43■■□□□ 1.98
CDKN3-207ENST00000543789 MCM9Q9NXL9 1143 aa27.43■■□□□ 1.98
CDKN3-207ENST00000543789 PDE6AP16499 860 aa27.42■■□□□ 1.98
CDKN3-207ENST00000543789 GRB14Q14449 540 aa27.42■■□□□ 1.98
CDKN3-207ENST00000543789 PANK1Q8TE04 598 aa27.42■■□□□ 1.98
CDKN3-207ENST00000543789 HOXC10Q9NYD6 342 aa27.42■■□□□ 1.98
CDKN3-207ENST00000543789 FOCADQ5VW36 1801 aa27.41■■□□□ 1.98
CDKN3-207ENST00000543789 MPHOSPH10O00566 681 aaKnown RBP27.41■■□□□ 1.98
CDKN3-207ENST00000543789 COG2Q14746 738 aa27.41■■□□□ 1.98
CDKN3-207ENST00000543789 DEFB123Q8N688 67 aa27.41■■□□□ 1.98
CDKN3-207ENST00000543789 DDX20Q9UHI6 824 aaKnown RBP27.41■■□□□ 1.98
CDKN3-207ENST00000543789 ALPK3Q96L96 1907 aa27.41■■□□□ 1.98
CDKN3-207ENST00000543789 MSCO60682 206 aa27.4■■□□□ 1.98
CDKN3-207ENST00000543789 CNGA1P29973 690 aa27.4■■□□□ 1.98
CDKN3-207ENST00000543789 CLASRPQ8N2M8 674 aaKnown RBP27.4■■□□□ 1.98
CDKN3-207ENST00000543789 NPLOC4Q8TAT6 608 aa27.4■■□□□ 1.98
CDKN3-207ENST00000543789 SENP6Q9GZR1 1112 aaPredicted RBP27.4■■□□□ 1.98
CDKN3-207ENST00000543789 DDX60LQ5H9U9 1706 aaKnown RBP27.4■■□□□ 1.98
CDKN3-207ENST00000543789 CDK5RAP2Q96SN8 1893 aa27.4■■□□□ 1.98
CDKN3-207ENST00000543789 ZNF532Q9HCE3 1301 aa27.4■■□□□ 1.98
CDKN3-207ENST00000543789 A0A1W2PRG0 241 aa27.39■■□□□ 1.98
CDKN3-207ENST00000543789 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.39■■□□□ 1.98
CDKN3-207ENST00000543789 MYO5AQ9Y4I1 1855 aaKnown RBP27.38■■□□□ 1.97
CDKN3-207ENST00000543789 GOLIM4O00461 696 aa27.38■■□□□ 1.97
CDKN3-207ENST00000543789 CYP2C19P33261 490 aa27.38■■□□□ 1.97
CDKN3-207ENST00000543789 EVX2Q03828 476 aa27.38■■□□□ 1.97
CDKN3-207ENST00000543789 DPP9Q86TI2 863 aa27.38■■□□□ 1.97
CDKN3-207ENST00000543789 SDR42E1Q8WUS8 393 aa27.38■■□□□ 1.97
CDKN3-207ENST00000543789 LPAR1Q92633 364 aa27.38■■□□□ 1.97
CDKN3-207ENST00000543789 KIF1BPQ96EK5 621 aa27.38■■□□□ 1.97
CDKN3-207ENST00000543789 DNAJC2Q99543 621 aaKnown RBP27.38■■□□□ 1.97
CDKN3-207ENST00000543789 DCP1AQ9NPI6 582 aaPredicted RBP27.38■■□□□ 1.97
CDKN3-207ENST00000543789 STRNO43815 780 aa27.37■■□□□ 1.97
CDKN3-207ENST00000543789 IFIT2P09913 472 aaKnown RBP27.37■■□□□ 1.97
CDKN3-207ENST00000543789 MDM2Q00987 491 aaPredicted RBP27.37■■□□□ 1.97
CDKN3-207ENST00000543789 MOV10L1Q9BXT6 1211 aaKnown RBP27.37■■□□□ 1.97
CDKN3-207ENST00000543789 TCRBV5S4A2TA0A5A2 114 aa27.36■■□□□ 1.97
CDKN3-207ENST00000543789 APBB1O00213 710 aa27.36■■□□□ 1.97
CDKN3-207ENST00000543789 DLL1O00548 723 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms