RNA–Protein interactions for RNA: ENST00000543615.1

FAM60A-208, Transcript of Protein FAM60A, humanhuman

TSL 5

Gene FAM60A, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-208ENST00000543615 RAB3GAP1Q15042 981 aa21.73■■□□□ 1.07
FAM60A-208ENST00000543615 TMEM179Q6ZVK1 233 aa21.73■■□□□ 1.07
FAM60A-208ENST00000543615 GPRC5AQ8NFJ5 357 aa21.73■■□□□ 1.07
FAM60A-208ENST00000543615 SDR42E1Q8WUS8 393 aa21.73■■□□□ 1.07
FAM60A-208ENST00000543615 CCDC17Q96LX7 622 aa21.73■■□□□ 1.07
FAM60A-208ENST00000543615 ARMT1Q9H993 441 aa21.73■■□□□ 1.07
FAM60A-208ENST00000543615 ZNF236Q9UL36 1845 aa21.73■■□□□ 1.07
FAM60A-208ENST00000543615 ERC2O15083 957 aa21.72■■□□□ 1.07
FAM60A-208ENST00000543615 CCL5P13501 91 aa21.72■■□□□ 1.07
FAM60A-208ENST00000543615 LBX2Q6XYB7 198 aa21.72■■□□□ 1.07
FAM60A-208ENST00000543615 TRMT44Q8IYL2 757 aaKnown RBP21.72■■□□□ 1.07
FAM60A-208ENST00000543615 KBTBD3Q8NAB2 608 aa21.72■■□□□ 1.07
FAM60A-208ENST00000543615 P2RX7Q99572 595 aaKnown RBP21.72■■□□□ 1.07
FAM60A-208ENST00000543615 SH2D4AQ9H788 454 aa21.72■■□□□ 1.07
FAM60A-208ENST00000543615 MYH4Q9Y623 1939 aa21.72■■□□□ 1.07
FAM60A-208ENST00000543615 SMARCA5O60264 1052 aaPredicted RBP21.71■■□□□ 1.07
FAM60A-208ENST00000543615 ECM2O94769 699 aaPredicted RBP21.71■■□□□ 1.07
FAM60A-208ENST00000543615 CCNA1P78396 465 aa21.71■■□□□ 1.07
FAM60A-208ENST00000543615 MTFR1Q15390 333 aa21.71■■□□□ 1.07
FAM60A-208ENST00000543615 GIMAP6Q6P9H5 292 aa21.71■■□□□ 1.07
FAM60A-208ENST00000543615 RNF208Q9H0X6 261 aa21.71■■□□□ 1.07
FAM60A-208ENST00000543615 ARPP21Q9UBL0 812 aaPredicted RBP21.71■■□□□ 1.07
FAM60A-208ENST00000543615 RABGAP1Q9Y3P9 1069 aa21.71■■□□□ 1.07
FAM60A-208ENST00000543615 HMGCRP04035 888 aa21.7■■□□□ 1.06
FAM60A-208ENST00000543615 ERVK-9P63128 1117 aa21.7■■□□□ 1.06
FAM60A-208ENST00000543615 ERVK-24P63145 666 aa21.7■■□□□ 1.06
FAM60A-208ENST00000543615 SHROOM1Q2M3G4 852 aaPredicted RBP21.7■■□□□ 1.06
FAM60A-208ENST00000543615 C12orf60Q5U649 245 aa21.7■■□□□ 1.06
FAM60A-208ENST00000543615 BCL11AQ9H165 835 aa21.7■■□□□ 1.06
FAM60A-208ENST00000543615 INHAP05111 366 aa21.69■■□□□ 1.06
FAM60A-208ENST00000543615 XRCC5P13010 732 aaKnown RBP21.69■■□□□ 1.06
FAM60A-208ENST00000543615 CATSPERGQ6ZRH7 1159 aa21.69■■□□□ 1.06
FAM60A-208ENST00000543615 APPBP2Q92624 585 aa21.69■■□□□ 1.06
FAM60A-208ENST00000543615 LPAR1Q92633 364 aa21.69■■□□□ 1.06
FAM60A-208ENST00000543615 NUDT12Q9BQG2 462 aa21.69■■□□□ 1.06
FAM60A-208ENST00000543615 FRMPD3Q5JV73 1810 aa21.69■■□□□ 1.06
FAM60A-208ENST00000543615 BRCA2P51587 3418 aa21.68■■□□□ 1.06
FAM60A-208ENST00000543615 GLRX3O76003 335 aaKnown RBP21.68■■□□□ 1.06
FAM60A-208ENST00000543615 GNAT2P19087 354 aa21.68■■□□□ 1.06
FAM60A-208ENST00000543615 VCAM1P19320 739 aa21.68■■□□□ 1.06
FAM60A-208ENST00000543615 GUCY1A2P33402 732 aa21.68■■□□□ 1.06
FAM60A-208ENST00000543615 C16orf86Q6ZW13 317 aa21.68■■□□□ 1.06
FAM60A-208ENST00000543615 CCAR1Q8IX12 1150 aaKnown RBP21.68■■□□□ 1.06
FAM60A-208ENST00000543615 SHISA4Q96DD7 197 aa21.68■■□□□ 1.06
FAM60A-208ENST00000543615 ARHGEF10LQ9HCE6 1279 aa21.68■■□□□ 1.06
FAM60A-208ENST00000543615 ZBTB47Q9UFB7 747 aaPredicted RBP21.68■■□□□ 1.06
FAM60A-208ENST00000543615 GJD2Q9UKL4 321 aa21.68■■□□□ 1.06
FAM60A-208ENST00000543615 SLC4A4Q9Y6R1 1079 aa21.68■■□□□ 1.06
FAM60A-208ENST00000543615 COL11A1P12107 1806 aaPredicted RBP21.68■■□□□ 1.06
FAM60A-208ENST00000543615 ZNFX1Q9P2E3 1918 aaKnown RBP21.68■■□□□ 1.06
FAM60A-208ENST00000543615 SEPT2Q15019 361 aa21.67■■□□□ 1.06
FAM60A-208ENST00000543615 PAK6Q9NQU5 681 aaPredicted RBP21.67■■□□□ 1.06
FAM60A-208ENST00000543615 RBPJLQ9UBG7 517 aa21.67■■□□□ 1.06
FAM60A-208ENST00000543615 ROBO3Q96MS0 1386 aa21.66■■□□□ 1.06
FAM60A-208ENST00000543615 MPHOSPH10O00566 681 aaKnown RBP21.66■■□□□ 1.06
FAM60A-208ENST00000543615 SGPL1O95470 568 aa21.66■■□□□ 1.06
FAM60A-208ENST00000543615 MYCP01106 439 aaPredicted RBP21.66■■□□□ 1.06
FAM60A-208ENST00000543615 ELNP15502 786 aa21.66■■□□□ 1.06
FAM60A-208ENST00000543615 SBK1Q52WX2 424 aa21.66■■□□□ 1.06
FAM60A-208ENST00000543615 U2AF1L4Q8WU68 220 aaKnown RBP21.66■■□□□ 1.06
FAM60A-208ENST00000543615 HTATIP2Q9BUP3 242 aa21.66■■□□□ 1.06
FAM60A-208ENST00000543615 PUS7LQ9H0K6 701 aaKnown RBP21.66■■□□□ 1.06
FAM60A-208ENST00000543615 TXNRD2Q9NNW7 524 aa21.66■■□□□ 1.06
FAM60A-208ENST00000543615 PCDHB15Q9Y5E8 787 aa21.66■■□□□ 1.06
FAM60A-208ENST00000543615 USP17L12C9JPN9 530 aa21.65■■□□□ 1.06
FAM60A-208ENST00000543615 USP17L21D6R901 530 aa21.65■■□□□ 1.06
FAM60A-208ENST00000543615 RNF113AO15541 343 aaKnown RBP21.65■■□□□ 1.06
FAM60A-208ENST00000543615 PRKAB2O43741 272 aa21.65■■□□□ 1.06
FAM60A-208ENST00000543615 SLC34A2O95436 690 aa21.65■■□□□ 1.06
FAM60A-208ENST00000543615 ZYXQ15942 572 aaKnown RBP21.65■■□□□ 1.06
FAM60A-208ENST00000543615 ACER1Q8TDN7 264 aa21.65■■□□□ 1.06
FAM60A-208ENST00000543615 UNC93B1Q9H1C4 597 aa21.65■■□□□ 1.06
FAM60A-208ENST00000543615 HOXC10Q9NYD6 342 aa21.65■■□□□ 1.06
FAM60A-208ENST00000543615 RPTORQ8N122 1335 aa21.64■■□□□ 1.05
FAM60A-208ENST00000543615 RGS2P41220 211 aa21.64■■□□□ 1.05
FAM60A-208ENST00000543615 CDK8P49336 464 aa21.64■■□□□ 1.05
FAM60A-208ENST00000543615 ICA1Q05084 483 aa21.64■■□□□ 1.05
FAM60A-208ENST00000543615 PLEKHH3Q7Z736 793 aa21.64■■□□□ 1.05
FAM60A-208ENST00000543615 UBE2Q1Q7Z7E8 422 aa21.64■■□□□ 1.05
FAM60A-208ENST00000543615 TICAM2Q86XR7 235 aa21.64■■□□□ 1.05
FAM60A-208ENST00000543615 MB21D1Q8N884 522 aa21.64■■□□□ 1.05
FAM60A-208ENST00000543615 ANKLE1Q8NAG6 615 aa21.64■■□□□ 1.05
FAM60A-208ENST00000543615 STRBPQ96SI9 672 aaKnown RBP21.64■■□□□ 1.05
FAM60A-208ENST00000543615 PAGR1Q9BTK6 254 aa21.64■■□□□ 1.05
FAM60A-208ENST00000543615 RPAP3Q9H6T3 665 aaPredicted RBP21.64■■□□□ 1.05
FAM60A-208ENST00000543615 ZNF287Q9HBT7 754 aa21.64■■□□□ 1.05
FAM60A-208ENST00000543615 TMX2Q9Y320 296 aa21.64■■□□□ 1.05
FAM60A-208ENST00000543615 MKI67P46013 3256 aaKnown RBP21.63■■□□□ 1.05
FAM60A-208ENST00000543615 CEP290O15078 2479 aa21.63■■□□□ 1.05
FAM60A-208ENST00000543615 CYP2D6P10635 497 aa21.63■■□□□ 1.05
FAM60A-208ENST00000543615 HDAC1Q13547 482 aaPredicted RBP21.63■■□□□ 1.05
FAM60A-208ENST00000543615 CTR9Q6PD62 1173 aa21.63■■□□□ 1.05
FAM60A-208ENST00000543615 GPR142Q7Z601 462 aa21.63■■□□□ 1.05
FAM60A-208ENST00000543615 APBA2Q99767 749 aa21.63■■□□□ 1.05
FAM60A-208ENST00000543615 CRISPLD2Q9H0B8 497 aa21.63■■□□□ 1.05
FAM60A-208ENST00000543615 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.63■■□□□ 1.058e-9■■■■■ 44.2
FAM60A-208ENST00000543615 KANSL2Q9H9L4 492 aa21.63■■□□□ 1.05
FAM60A-208ENST00000543615 CWC22Q9HCG8 908 aaKnown RBP21.63■■□□□ 1.05
FAM60A-208ENST00000543615 ALPK3Q96L96 1907 aa21.63■■□□□ 1.05
FAM60A-208ENST00000543615 SPDYE16A6NNV3 312 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms