RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 RANBP6O60518 1105 aaKnown RBP20.26■□□□□ 0.83
RABGGTA-203ENST00000543002 TSPY3P0CV98 308 aa20.26■□□□□ 0.83
RABGGTA-203ENST00000543002 TSPY8P0CW00 308 aa20.26■□□□□ 0.83
RABGGTA-203ENST00000543002 NT5C2P49902 561 aa20.26■□□□□ 0.83
RABGGTA-203ENST00000543002 BACE1P56817 501 aa20.26■□□□□ 0.83
RABGGTA-203ENST00000543002 ICA1Q05084 483 aa20.26■□□□□ 0.83
RABGGTA-203ENST00000543002 MOGSQ13724 837 aa20.26■□□□□ 0.83
RABGGTA-203ENST00000543002 NECTIN1Q15223 517 aa20.26■□□□□ 0.83
RABGGTA-203ENST00000543002 SH3D19Q5HYK7 790 aa20.26■□□□□ 0.83
RABGGTA-203ENST00000543002 FAM47AQ5JRC9 791 aa20.26■□□□□ 0.83
RABGGTA-203ENST00000543002 RRP12Q5JTH9 1297 aaKnown RBP20.26■□□□□ 0.83
RABGGTA-203ENST00000543002 IFNL1Q8IU54 200 aa20.26■□□□□ 0.83
RABGGTA-203ENST00000543002 SIAH1Q8IUQ4 282 aa20.26■□□□□ 0.83
RABGGTA-203ENST00000543002 ACER1Q8TDN7 264 aa20.26■□□□□ 0.83
RABGGTA-203ENST00000543002 PTPN18Q99952 460 aa20.26■□□□□ 0.83
RABGGTA-203ENST00000543002 WBP1LQ9NX94 342 aa20.26■□□□□ 0.83
RABGGTA-203ENST00000543002 PLIN4Q96Q06 1357 aa20.25■□□□□ 0.83
RABGGTA-203ENST00000543002 GREB1LQ9C091 1923 aaPredicted RBP20.25■□□□□ 0.83
RABGGTA-203ENST00000543002 TSPY2A6NKD2 308 aa20.25■□□□□ 0.83
RABGGTA-203ENST00000543002 IGF2BP3O00425 579 aaKnown RBP eCLIP20.25■□□□□ 0.83
RABGGTA-203ENST00000543002 REC8O95072 547 aa20.25■□□□□ 0.83
RABGGTA-203ENST00000543002 MTMR2Q13614 643 aa20.25■□□□□ 0.83
RABGGTA-203ENST00000543002 FASTKD5Q7L8L6 764 aaKnown RBP20.25■□□□□ 0.83
RABGGTA-203ENST00000543002 CLEC10AQ8IUN9 316 aa20.25■□□□□ 0.83
RABGGTA-203ENST00000543002 KIAA1683Q9H0B3 1180 aa20.25■□□□□ 0.83
RABGGTA-203ENST00000543002 NEDD4P46934 1319 aa20.24■□□□□ 0.83
RABGGTA-203ENST00000543002 A0A1W2PRG0 241 aa20.24■□□□□ 0.83
RABGGTA-203ENST00000543002 HMGCS2P54868 508 aa20.24■□□□□ 0.83
RABGGTA-203ENST00000543002 OTUD7BQ6GQQ9 843 aa20.24■□□□□ 0.83
RABGGTA-203ENST00000543002 ESR2Q92731 530 aa20.24■□□□□ 0.83
RABGGTA-203ENST00000543002 FEZ1Q99689 392 aa20.24■□□□□ 0.83
RABGGTA-203ENST00000543002 CNNM2Q9H8M5 875 aa20.24■□□□□ 0.83
RABGGTA-203ENST00000543002 ARHGEF10LQ9HCE6 1279 aa20.24■□□□□ 0.83
RABGGTA-203ENST00000543002 PTPRFP10586 1907 aa20.24■□□□□ 0.83
RABGGTA-203ENST00000543002 BTBD19C9JJ37 291 aa20.23■□□□□ 0.83
RABGGTA-203ENST00000543002 SLC27A2O14975 620 aa20.23■□□□□ 0.83
RABGGTA-203ENST00000543002 ALDH1A1P00352 501 aa20.23■□□□□ 0.83
RABGGTA-203ENST00000543002 EEF2P13639 858 aaKnown RBP20.23■□□□□ 0.83
RABGGTA-203ENST00000543002 CREB3L3Q68CJ9 461 aa20.23■□□□□ 0.83
RABGGTA-203ENST00000543002 GPAT2Q6NUI2 795 aa20.23■□□□□ 0.83
RABGGTA-203ENST00000543002 USP17L2Q6R6M4 530 aa20.23■□□□□ 0.83
RABGGTA-203ENST00000543002 GADL1Q6ZQY3 521 aa20.23■□□□□ 0.83
RABGGTA-203ENST00000543002 ANKRD23Q86SG2 305 aa20.23■□□□□ 0.83
RABGGTA-203ENST00000543002 FAM43AQ8N2R8 423 aa20.23■□□□□ 0.83
RABGGTA-203ENST00000543002 PROCA1Q8NCQ7 364 aaPredicted RBP20.23■□□□□ 0.83
RABGGTA-203ENST00000543002 CEP95Q96GE4 821 aa20.23■□□□□ 0.83
RABGGTA-203ENST00000543002 BEGAINQ9BUH8 593 aa20.23■□□□□ 0.83
RABGGTA-203ENST00000543002 KRT23Q9C075 422 aa20.23■□□□□ 0.83
RABGGTA-203ENST00000543002 ZCCHC17Q9NP64 241 aaKnown RBP20.23■□□□□ 0.83
RABGGTA-203ENST00000543002 MTMR4Q9NYA4 1195 aa20.23■□□□□ 0.83
RABGGTA-203ENST00000543002 NYAP2Q9P242 653 aa20.23■□□□□ 0.83
RABGGTA-203ENST00000543002 TMX2Q9Y320 296 aa20.23■□□□□ 0.83
RABGGTA-203ENST00000543002 EPB41L2O43491 1005 aaKnown RBP20.22■□□□□ 0.83
RABGGTA-203ENST00000543002 USP14P54578 494 aa20.22■□□□□ 0.83
RABGGTA-203ENST00000543002 NKX2-3Q8TAU0 364 aa20.22■□□□□ 0.83
RABGGTA-203ENST00000543002 C12orf42Q96LP6 360 aa20.22■□□□□ 0.83
RABGGTA-203ENST00000543002 SH2D4AQ9H788 454 aa20.22■□□□□ 0.83
RABGGTA-203ENST00000543002 EMILIN3Q9NT22 766 aa20.22■□□□□ 0.83
RABGGTA-203ENST00000543002 RNF186Q9NXI6 227 aa20.22■□□□□ 0.83
RABGGTA-203ENST00000543002 TMOD4Q9NZQ9 345 aa20.22■□□□□ 0.83
RABGGTA-203ENST00000543002 TAF6LQ9Y6J9 622 aa20.22■□□□□ 0.83
RABGGTA-203ENST00000543002 B4E1Z4 1266 aa20.21■□□□□ 0.83
RABGGTA-203ENST00000543002 E7EWF7 191 aa20.21■□□□□ 0.83
RABGGTA-203ENST00000543002 CA12O43570 354 aa20.21■□□□□ 0.83
RABGGTA-203ENST00000543002 ATP2B2Q01814 1243 aa20.21■□□□□ 0.83
RABGGTA-203ENST00000543002 DGKZQ13574 1117 aa20.21■□□□□ 0.83
RABGGTA-203ENST00000543002 PPP4R3BQ5MIZ7 849 aa20.21■□□□□ 0.83
RABGGTA-203ENST00000543002 RNF20Q5VTR2 975 aa20.21■□□□□ 0.83
RABGGTA-203ENST00000543002 IL17RBQ9NRM6 502 aa20.21■□□□□ 0.83
RABGGTA-203ENST00000543002 TCP11L1Q9NUJ3 509 aa20.21■□□□□ 0.83
RABGGTA-203ENST00000543002 SAGE1Q9NXZ1 904 aa20.21■□□□□ 0.83
RABGGTA-203ENST00000543002 AGTPBP1Q9UPW5 1226 aa20.21■□□□□ 0.83
RABGGTA-203ENST00000543002 KDM4AO75164 1064 aa20.2■□□□□ 0.82
RABGGTA-203ENST00000543002 TTLL1O95922 423 aa20.2■□□□□ 0.82
RABGGTA-203ENST00000543002 TRDNQ13061 729 aa20.2■□□□□ 0.82
RABGGTA-203ENST00000543002 ZYXQ15942 572 aaKnown RBP20.2■□□□□ 0.82
RABGGTA-203ENST00000543002 STOX1Q6ZVD7 989 aa20.2■□□□□ 0.82
RABGGTA-203ENST00000543002 MKL1Q969V6 931 aa20.2■□□□□ 0.82
RABGGTA-203ENST00000543002 CLIP2Q9UDT6 1046 aa20.2■□□□□ 0.82
RABGGTA-203ENST00000543002 SLC45A1Q9Y2W3 748 aa20.2■□□□□ 0.82
RABGGTA-203ENST00000543002 LOC285556D6RIA3 1793 aa20.19■□□□□ 0.82
RABGGTA-203ENST00000543002 PDHXO00330 501 aa20.19■□□□□ 0.82
RABGGTA-203ENST00000543002 NMT2O60551 498 aa20.19■□□□□ 0.82
RABGGTA-203ENST00000543002 TRPA1O75762 1119 aa20.19■□□□□ 0.82
RABGGTA-203ENST00000543002 NOVP48745 357 aa20.19■□□□□ 0.82
RABGGTA-203ENST00000543002 TREML2Q5T2D2 321 aa20.19■□□□□ 0.82
RABGGTA-203ENST00000543002 NCOA7Q8NI08 942 aa20.19■□□□□ 0.82
RABGGTA-203ENST00000543002 CFHR5Q9BXR6 569 aa20.19■□□□□ 0.82
RABGGTA-203ENST00000543002 VCPKMTQ9H867 229 aa20.19■□□□□ 0.82
RABGGTA-203ENST00000543002 ZSWIM5Q9P217 1185 aa20.19■□□□□ 0.82
RABGGTA-203ENST00000543002 SYNPO2Q9UMS6 1093 aa20.19■□□□□ 0.82
RABGGTA-203ENST00000543002 EIF5BO60841 1220 aaKnown RBP20.18■□□□□ 0.82
RABGGTA-203ENST00000543002 HSPA1AP0DMV8 641 aaKnown RBP20.18■□□□□ 0.82
RABGGTA-203ENST00000543002 HSPA1BP0DMV9 641 aaKnown RBP20.18■□□□□ 0.82
RABGGTA-203ENST00000543002 RALYLQ86SE5 291 aaKnown RBP20.18■□□□□ 0.82
RABGGTA-203ENST00000543002 HSPA4P34932 840 aa20.17■□□□□ 0.82
RABGGTA-203ENST00000543002 PABPC4Q13310 644 aaKnown RBP eCLIP20.17■□□□□ 0.82
RABGGTA-203ENST00000543002 TAF1CQ15572 869 aaPredicted RBP20.17■□□□□ 0.82
RABGGTA-203ENST00000543002 TSGA10IPQ3SY00 556 aa20.17■□□□□ 0.82
RABGGTA-203ENST00000543002 CCDC178Q5BJE1 867 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms