RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 CTNND2Q9UQB3 1225 aa6.6□□□□□ -1.35
KNTC1-211ENST00000541427 PCDHGB7Q9Y5F8 929 aa6.6□□□□□ -1.35
KNTC1-211ENST00000541427 PRAMEF27A3QJZ7 478 aa6.59□□□□□ -1.35
KNTC1-211ENST00000541427 RNGTTO60942 597 aaKnown RBP6.59□□□□□ -1.35
KNTC1-211ENST00000541427 CILPO75339 1184 aa6.59□□□□□ -1.35
KNTC1-211ENST00000541427 KRT1P04264 644 aa6.59□□□□□ -1.35
KNTC1-211ENST00000541427 EIF4A3P38919 411 aaKnown RBP6.59□□□□□ -1.35
KNTC1-211ENST00000541427 ZP2Q05996 745 aa6.59□□□□□ -1.35
KNTC1-211ENST00000541427 IKZF1Q13422 519 aa6.59□□□□□ -1.35
KNTC1-211ENST00000541427 SNAP47Q5SQN1 464 aa6.59□□□□□ -1.35
KNTC1-211ENST00000541427 ZBTB37Q5TC79 503 aa6.59□□□□□ -1.35
KNTC1-211ENST00000541427 MPZL3Q6UWV2 235 aa6.59□□□□□ -1.35
KNTC1-211ENST00000541427 HDXQ7Z353 690 aa6.59□□□□□ -1.35
KNTC1-211ENST00000541427 CCDC84Q86UT8 332 aaPredicted RBP6.59□□□□□ -1.35
KNTC1-211ENST00000541427 GATAD2BQ8WXI9 593 aa6.59□□□□□ -1.35
KNTC1-211ENST00000541427 TNKS2Q9H2K2 1166 aa6.59□□□□□ -1.35
KNTC1-211ENST00000541427 SNX11Q9Y5W9 270 aa6.59□□□□□ -1.35
KNTC1-211ENST00000541427 SNCAIPQ9Y6H5 919 aa6.59□□□□□ -1.35
KNTC1-211ENST00000541427 NFIBO00712 420 aa6.58□□□□□ -1.36
KNTC1-211ENST00000541427 FANCGO15287 622 aa6.58□□□□□ -1.36
KNTC1-211ENST00000541427 GLI1P08151 1106 aa6.58□□□□□ -1.36
KNTC1-211ENST00000541427 AFMP43652 599 aa6.58□□□□□ -1.36
KNTC1-211ENST00000541427 RACK1P63244 317 aaKnown RBP6.58□□□□□ -1.36
KNTC1-211ENST00000541427 RPL6Q02878 288 aaKnown RBP6.58□□□□□ -1.36
KNTC1-211ENST00000541427 C9orf131Q5VYM1 1079 aa6.58□□□□□ -1.36
KNTC1-211ENST00000541427 USP48Q86UV5 1035 aa6.58□□□□□ -1.36
KNTC1-211ENST00000541427 FBXO27Q8NI29 283 aa6.58□□□□□ -1.36
KNTC1-211ENST00000541427 ASB11Q8WXH4 323 aa6.58□□□□□ -1.36
KNTC1-211ENST00000541427 GREM1O60565 184 aa6.57□□□□□ -1.36
KNTC1-211ENST00000541427 FAM196AQ6ZSG2 479 aa6.57□□□□□ -1.36
KNTC1-211ENST00000541427 ZNF296Q8WUU4 475 aaPredicted RBP6.57□□□□□ -1.36
KNTC1-211ENST00000541427 FBRSQ9HAH7 460 aa6.57□□□□□ -1.36
KNTC1-211ENST00000541427 DDX41Q9UJV9 622 aaKnown RBP6.57□□□□□ -1.36
KNTC1-211ENST00000541427 PCOLCE2Q9UKZ9 415 aa6.57□□□□□ -1.36
KNTC1-211ENST00000541427 INHBBP09529 407 aa6.56□□□□□ -1.36
KNTC1-211ENST00000541427 GRK4P32298 578 aa6.56□□□□□ -1.36
KNTC1-211ENST00000541427 CRKP46108 304 aa6.56□□□□□ -1.36
KNTC1-211ENST00000541427 AMIGO3Q86WK7 504 aa6.56□□□□□ -1.36
KNTC1-211ENST00000541427 NT5DC4Q86YG4 428 aa6.56□□□□□ -1.36
KNTC1-211ENST00000541427 TOP6BLQ8N6T0 577 aa6.56□□□□□ -1.36
KNTC1-211ENST00000541427 WNT10AQ9GZT5 417 aa6.56□□□□□ -1.36
KNTC1-211ENST00000541427 PICK1Q9NRD5 415 aa6.56□□□□□ -1.36
KNTC1-211ENST00000541427 SUPT16HQ9Y5B9 1047 aaKnown RBP6.56□□□□□ -1.36
KNTC1-211ENST00000541427 NPIPB6E9PJ23 425 aa6.55□□□□□ -1.36
KNTC1-211ENST00000541427 TLR3O15455 904 aaKnown RBP6.55□□□□□ -1.36
KNTC1-211ENST00000541427 CTSWP56202 376 aa6.55□□□□□ -1.36
KNTC1-211ENST00000541427 RAD51AP2Q09MP3 1159 aa6.55□□□□□ -1.36
KNTC1-211ENST00000541427 MPP2Q14168 576 aa6.55□□□□□ -1.36
KNTC1-211ENST00000541427 NKG7Q16617 165 aa6.55□□□□□ -1.36
KNTC1-211ENST00000541427 KIRREL1Q96J84 757 aa6.55□□□□□ -1.36
KNTC1-211ENST00000541427 HEXIM2Q96MH2 286 aaKnown RBP6.55□□□□□ -1.36
KNTC1-211ENST00000541427 LRRC3Q9BY71 257 aa6.55□□□□□ -1.36
KNTC1-211ENST00000541427 UBP1Q9NZI7 540 aa6.55□□□□□ -1.36
KNTC1-211ENST00000541427 POLR3KQ9Y2Y1 108 aaPredicted RBP6.55□□□□□ -1.36
KNTC1-211ENST00000541427 CORINQ9Y5Q5 1042 aa6.55□□□□□ -1.36
KNTC1-211ENST00000541427 NISCHQ9Y2I1 1504 aa6.55□□□□□ -1.36
KNTC1-211ENST00000541427 BPNT1O95861 308 aa6.54□□□□□ -1.36
KNTC1-211ENST00000541427 ETF1P62495 437 aaKnown RBP6.54□□□□□ -1.36
KNTC1-211ENST00000541427 SLBPQ14493 270 aaKnown RBP eCLIP6.54□□□□□ -1.36
KNTC1-211ENST00000541427 TMEM67Q5HYA8 995 aa6.54□□□□□ -1.36
KNTC1-211ENST00000541427 REC114Q7Z4M0 266 aa6.54□□□□□ -1.36
KNTC1-211ENST00000541427 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.54□□□□□ -1.36
KNTC1-211ENST00000541427 FBXO15Q8NCQ5 510 aaPredicted RBP6.54□□□□□ -1.36
KNTC1-211ENST00000541427 EAF1Q96JC9 268 aaPredicted RBP6.54□□□□□ -1.36
KNTC1-211ENST00000541427 SPON2Q9BUD6 331 aa6.54□□□□□ -1.36
KNTC1-211ENST00000541427 SSU72Q9NP77 194 aaKnown RBP6.54□□□□□ -1.36
KNTC1-211ENST00000541427 TACC3Q9Y6A5 838 aa6.54□□□□□ -1.36
KNTC1-211ENST00000541427 TCF3P15923 654 aa6.53□□□□□ -1.36
KNTC1-211ENST00000541427 KIAA0825Q8IV33 1275 aa6.53□□□□□ -1.36
KNTC1-211ENST00000541427 SPACA3Q8IXA5 215 aa6.53□□□□□ -1.36
KNTC1-211ENST00000541427 ZNF507Q8TCN5 953 aa6.53□□□□□ -1.36
KNTC1-211ENST00000541427 DIRC2Q96SL1 478 aa6.53□□□□□ -1.36
KNTC1-211ENST00000541427 IGSF5Q9NSI5 407 aa6.53□□□□□ -1.36
KNTC1-211ENST00000541427 PRR36Q9H6K5 1346 aa6.52□□□□□ -1.37
KNTC1-211ENST00000541427 GRIN3BO60391 1043 aa6.52□□□□□ -1.37
KNTC1-211ENST00000541427 PGRP06401 933 aa6.52□□□□□ -1.37
KNTC1-211ENST00000541427 CDC37L1Q7L3B6 337 aa6.52□□□□□ -1.37
KNTC1-211ENST00000541427 ARMCX6Q7L4S7 300 aa6.52□□□□□ -1.37
KNTC1-211ENST00000541427 FAM214BQ7L5A3 538 aa6.52□□□□□ -1.37
KNTC1-211ENST00000541427 NT5C1AQ9BXI3 368 aa6.52□□□□□ -1.37
KNTC1-211ENST00000541427 TJP2Q9UDY2 1190 aa6.52□□□□□ -1.37
KNTC1-211ENST00000541427 JAG2Q9Y219 1238 aa6.52□□□□□ -1.37
KNTC1-211ENST00000541427 E9PSI1 815 aa6.51□□□□□ -1.37
KNTC1-211ENST00000541427 TMEM253P0C7T8 217 aa6.51□□□□□ -1.37
KNTC1-211ENST00000541427 APOBRQ0VD83 1088 aa6.51□□□□□ -1.37
KNTC1-211ENST00000541427 KCNA10Q16322 511 aa6.51□□□□□ -1.37
KNTC1-211ENST00000541427 CWF19L2Q2TBE0 894 aaKnown RBP6.51□□□□□ -1.37
KNTC1-211ENST00000541427 KRTAP5-3Q6L8H2 238 aa6.51□□□□□ -1.37
KNTC1-211ENST00000541427 HID1Q8IV36 788 aa6.51□□□□□ -1.37
KNTC1-211ENST00000541427 ZNF654Q8IZM8 581 aa6.51□□□□□ -1.37
KNTC1-211ENST00000541427 KCT2Q8NC54 265 aa6.51□□□□□ -1.37
KNTC1-211ENST00000541427 ACSF2Q96CM8 615 aaPredicted RBP6.51□□□□□ -1.37
KNTC1-211ENST00000541427 NSUN3Q9H649 340 aaKnown RBP6.51□□□□□ -1.37
KNTC1-211ENST00000541427 BRMS1Q9HCU9 246 aa6.51□□□□□ -1.37
KNTC1-211ENST00000541427 GTF2IRD1Q9UHL9 959 aa6.51□□□□□ -1.37
KNTC1-211ENST00000541427 ADAM30Q9UKF2 790 aa6.51□□□□□ -1.37
KNTC1-211ENST00000541427 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.51□□□□□ -1.37
KNTC1-211ENST00000541427 ROBO2Q9HCK4 1378 aa6.51□□□□□ -1.37
KNTC1-211ENST00000541427 IGF2BP3O00425 579 aaKnown RBP eCLIP6.5□□□□□ -1.37
KNTC1-211ENST00000541427 DNAJA2O60884 412 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms