RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 TXKP42681 527 aa11.21□□□□□ -0.62
PHC1-208ENST00000540574 RBM6P78332 1123 aaKnown RBP11.21□□□□□ -0.62
PHC1-208ENST00000540574 DTHD1Q6ZMT9 781 aa11.21□□□□□ -0.62
PHC1-208ENST00000540574 CNBD1Q8NA66 436 aa11.21□□□□□ -0.62
PHC1-208ENST00000540574 PNMA1Q8ND90 353 aa11.21□□□□□ -0.62
PHC1-208ENST00000540574 CCDC102AQ96A19 550 aa11.21□□□□□ -0.62
PHC1-208ENST00000540574 MINPP1Q9UNW1 487 aa11.21□□□□□ -0.62
PHC1-208ENST00000540574 EVCP57679 992 aa11.2□□□□□ -0.62
PHC1-208ENST00000540574 DYMQ7RTS9 669 aa11.2□□□□□ -0.62
PHC1-208ENST00000540574 PPARDQ03181 441 aa11.2□□□□□ -0.62
PHC1-208ENST00000540574 ARID5AQ03989 594 aa11.2□□□□□ -0.62
PHC1-208ENST00000540574 ARMCX5Q6P1M9 558 aa11.2□□□□□ -0.62
PHC1-208ENST00000540574 ADGRA1Q86SQ6 560 aa11.2□□□□□ -0.62
PHC1-208ENST00000540574 METTL16Q86W50 562 aaKnown RBP11.2□□□□□ -0.62
PHC1-208ENST00000540574 MARCH10Q8NA82 808 aaPredicted RBP11.2□□□□□ -0.62
PHC1-208ENST00000540574 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.2□□□□□ -0.62
PHC1-208ENST00000540574 CCNT1O60563 726 aaKnown RBP11.2□□□□□ -0.62
PHC1-208ENST00000540574 NCBP1Q09161 790 aaKnown RBP11.2□□□□□ -0.62
PHC1-208ENST00000540574 C3orf67Q6ZVT6 689 aa11.2□□□□□ -0.62
PHC1-208ENST00000540574 PPP1R1BQ9UD71 204 aaPredicted RBP11.2□□□□□ -0.62
PHC1-208ENST00000540574 FRMPD2Q68DX3 1309 aaPredicted RBP11.2□□□□□ -0.62
PHC1-208ENST00000540574 ERVV-1B6SEH8 477 aa11.19□□□□□ -0.62
PHC1-208ENST00000540574 AKR1B15C9JRZ8 316 aaPredicted RBP11.19□□□□□ -0.62
PHC1-208ENST00000540574 GTF2F1P35269 517 aaKnown RBP eCLIP11.19□□□□□ -0.62
PHC1-208ENST00000540574 LIFRP42702 1097 aa11.19□□□□□ -0.62
PHC1-208ENST00000540574 TCP10Q12799 353 aa11.19□□□□□ -0.62
PHC1-208ENST00000540574 AXDND1Q5T1B0 1012 aaPredicted RBP11.19□□□□□ -0.62
PHC1-208ENST00000540574 TRAPPC3LQ5T215 181 aa11.19□□□□□ -0.62
PHC1-208ENST00000540574 GOLGA6L1Q8N7Z2 621 aa11.19□□□□□ -0.62
PHC1-208ENST00000540574 PSMB7Q99436 277 aa11.19□□□□□ -0.62
PHC1-208ENST00000540574 SLF1Q9BQI6 1058 aa11.19□□□□□ -0.62
PHC1-208ENST00000540574 IRX2Q9BZI1 471 aaPredicted RBP11.19□□□□□ -0.62
PHC1-208ENST00000540574 OVOS2A0A0G2JMS6 1433 aa11.19□□□□□ -0.62
PHC1-208ENST00000540574 SPECC1LQ69YQ0 1117 aa11.19□□□□□ -0.62
PHC1-208ENST00000540574 GDAP1L1Q96MZ0 367 aa11.19□□□□□ -0.62
PHC1-208ENST00000540574 SPTLC3Q9NUV7 552 aa11.19□□□□□ -0.62
PHC1-208ENST00000540574 BIN2Q9UBW5 565 aaPredicted RBP11.19□□□□□ -0.62
PHC1-208ENST00000540574 PP2D1A8MPX8 630 aa11.19□□□□□ -0.62
PHC1-208ENST00000540574 CCDC175P0C221 793 aa11.19□□□□□ -0.62
PHC1-208ENST00000540574 ARID4AP29374 1257 aaPredicted RBP11.19□□□□□ -0.62
PHC1-208ENST00000540574 SPTY2D1Q68D10 685 aaPredicted RBP11.19□□□□□ -0.62
PHC1-208ENST00000540574 MLKLQ8NB16 471 aa11.19□□□□□ -0.62
PHC1-208ENST00000540574 TBC1D7Q9P0N9 293 aa11.19□□□□□ -0.62
PHC1-208ENST00000540574 ZNF804BA4D1E1 1349 aa11.19□□□□□ -0.62
PHC1-208ENST00000540574 PPP6R2O75170 966 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 SCNN1DP51172 638 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 TDRD12Q587J7 1177 aaKnown RBP11.18□□□□□ -0.62
PHC1-208ENST00000540574 LRRC47Q8N1G4 583 aaKnown RBP11.18□□□□□ -0.62
PHC1-208ENST00000540574 ZNF710Q8N1W2 664 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 CACNA1FO60840 1977 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 FAM208AQ9UK61 1670 aaKnown RBP11.18□□□□□ -0.62
PHC1-208ENST00000540574 TEX33O43247 280 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 KRT9P35527 623 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 GTF2IP78347 998 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 HSP90B2PQ58FF3 399 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 ZNF34Q8IZ26 560 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 ZNF397Q8NF99 534 aaPredicted RBP11.18□□□□□ -0.62
PHC1-208ENST00000540574 FAM84BQ96KN1 310 aaPredicted RBP11.18□□□□□ -0.62
PHC1-208ENST00000540574 NYXQ9GZU5 481 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 PLEKHA4Q9H4M7 779 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 MMRN2Q9H8L6 949 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 SOWAHDA6NJG2 315 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 LDHCP07864 332 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 CALM1P0DP23 149 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 CALM2P0DP24 149 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 CALM3P0DP25 149 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 SCG2P13521 617 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 MTF1Q14872 753 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 USP17L2Q6R6M4 530 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 FAM196AQ6ZSG2 479 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 ERO1AQ96HE7 468 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 NBPF3Q9H094 633 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 IMPACTQ9P2X3 320 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 PPP2R2CQ9Y2T4 447 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 CDHR2Q9BYE9 1310 aa11.18□□□□□ -0.62
PHC1-208ENST00000540574 SEC31AO94979 1220 aaKnown RBP11.17□□□□□ -0.62
PHC1-208ENST00000540574 ETF1P62495 437 aaKnown RBP11.17□□□□□ -0.62
PHC1-208ENST00000540574 FMR1Q06787 632 aaKnown RBP eCLIP11.17□□□□□ -0.62
PHC1-208ENST00000540574 NKX1-1Q15270 411 aaPredicted RBP11.17□□□□□ -0.62
PHC1-208ENST00000540574 PTF1AQ7RTS3 328 aa11.17□□□□□ -0.62
PHC1-208ENST00000540574 KRT222Q8N1A0 295 aa11.17□□□□□ -0.62
PHC1-208ENST00000540574 EXOC1Q9NV70 894 aa11.17□□□□□ -0.62
PHC1-208ENST00000540574 FOXP2O15409 715 aa11.17□□□□□ -0.62
PHC1-208ENST00000540574 CASP14P31944 242 aa11.17□□□□□ -0.62
PHC1-208ENST00000540574 TECP42680 631 aa11.17□□□□□ -0.62
PHC1-208ENST00000540574 UBE4AQ14139 1066 aa11.17□□□□□ -0.62
PHC1-208ENST00000540574 MFSD14BQ5SR56 506 aa11.17□□□□□ -0.62
PHC1-208ENST00000540574 JADE2Q9NQC1 790 aa11.17□□□□□ -0.62
PHC1-208ENST00000540574 XRN1Q8IZH2 1706 aaKnown RBP11.17□□□□□ -0.62
PHC1-208ENST00000540574 MYO1BO43795 1136 aa11.17□□□□□ -0.62
PHC1-208ENST00000540574 CCZ1BP86790 482 aa11.17□□□□□ -0.62
PHC1-208ENST00000540574 CCZ1P86791 482 aaPredicted RBP11.17□□□□□ -0.62
PHC1-208ENST00000540574 GPS2Q13227 327 aa11.17□□□□□ -0.62
PHC1-208ENST00000540574 DOK7Q18PE1 504 aa11.17□□□□□ -0.62
PHC1-208ENST00000540574 RESP18Q5W5W9 173 aa11.17□□□□□ -0.62
PHC1-208ENST00000540574 CACNA2D4Q7Z3S7 1137 aa11.17□□□□□ -0.62
PHC1-208ENST00000540574 ZNF804AQ7Z570 1209 aa11.17□□□□□ -0.62
PHC1-208ENST00000540574 TXNRD3Q86VQ6 643 aa11.17□□□□□ -0.62
PHC1-208ENST00000540574 STAG2Q8N3U4 1231 aa11.17□□□□□ -0.62
PHC1-208ENST00000540574 NELFBQ8WX92 580 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms